Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------YAB1                             --------->ATHB12              --------->ATHB12                         <---------ANAC46                 --------->ICU4                      --------->DEAR3(1)              <---------ZAT14                  ---------->DOF2                     --------->MYB46(3)               --------->LBD16              ------>MYB46(1)                   --------->MYB52(1)                 --------->ZAT14              ------>MYB83                   <---------ARR14(2)                --------->ANAC46           --------->ANAC46                   --------->ARR14(2)               <---------LBD16          <-------TEIL     --------->GLK1(1)------->GAMYB              --------->At4g35610       --------->ARR14(2)   <------ZmHOX2a(1) --------->DEAR3(2)   --------->ZAT14--------->At5g28300--------->CCA1(2)    <--- --->DOF2     ----------->RAV1(1)       --------------->AtSPL8             <---------ARR14(2)   ----- -HSFB2a(2)--------->ANAC46<---------MYB52(1)    <---------At4g35610  <-----------RAV1(2)       <----   gcagaggagacccaaacaacaaaaccgccgtttattggaaacattgtactcatctccgcagtgattagtgcctcagggatacaccaaatgaaagggaaga  11417900                             <---------ZAT2                        --------->LBD16         ---------->DOF2     --------->At4g35610                   ------>ZmHOX2a(1)     --------->TOE1(3)       <---------At4g35610                 ----------->RAV1(2)     --------->TOE2(3)       --------->ZAT2       <---------At4g35610 ---ZmHOX2a(2)              ------>ZmHOX2a(1)     --------->At4g35610                             --- ---->ARR11(3)   --------->MYB52(1)    --------->ZAT6       <------ZmHOX2a(1)           <------ZmHOX2a(1) -----ARR11(3)--------->At4g35610      --------->ANAC46 ---------->DOF2    <---------ANAC46      <---   tcacaaaccctaaaagagctaacaatggtcctgctgcattcacactaccttcagcaccgaaaggacctcctgagacttcgtagaatatgaggaaaacgag  11418000                                                             --------->ICU4                                                    ------>MYB46(1)                                                    ------>MYB83                                                  --------->AtMYB61 <---------ICU4     --------->ANAC46                                                 --------->MYB46(3)<---------YAB1      --------->ANAC58                                              --------->MYB46(3) <---------ICU4        --------->ANAC58                                             <------ZmHOX2a(2)   --------->YAB1    --------->YAB1                                            --------->ARR14(2)  <---------YAB1    <---------YAB1                                    --------------------->WRI1<---------ICU4 <---------ICU4 -------->GT1                       <----------DOF2----------->RAV1(1)    ---------->DOF2          -- ------ZAT6 <----------DOF2  <-----------GT1<---------ARR14(2)--------->YAB1--------->ICU4    <------   tggtaacattgaaactttctgaatcgaattgtttccttctttagacgatccaccaacatcgccatcatcatcatcgtaaagattaccataagcaaattca  11418100                                                                                                   --                                                                                                  ---                                                                                                 ----                               -------->HAHB4                    ----------->GT1     --------->AHL20(2)                              <---------ATHB12                 ---------->DOF2    --------->At4g35610                              <---------YAB1               <----------ID1       --------->YAB1  <---- ------->YAB1                <---------TOE2(3)          ------------------------>ANAC81        <----- -TEIL           --------->YAB1--------->YAB1          ---------->DOF2       --------->WOX13(1)------   ttcatgttatagtctcccatggtaatgaactaatgatacttcccttctgaatcaacacaaagaaacaaagaaaaaaaaacaatcagataaattcttggat  11418200      ---------->DOF2    --------->ANAC58    --------->ANAC58                                        *TSS    --------->ANAC46                                 <---------ARR14(2) ---->ZmHOX2a(1)                                     --------->ARR14(2) ------>TOE2(3)                                      <-----------ARR10 -->ZmHOX2a(2)                                       --------->GLK1(2)             <---------------AGL15 --ZmHOX2a(2)                     <---------------AtSPL8    <-------GAMYB          <----------DOF2 ----ARR14(2)                 ---------->DOF2       <---------GLK1(2)  <------------CBF --->ARR14(2)              ----------->GT1   <-----------HVH21       <---------YAB1--------------->AGL15   ccttatacgaaagtctaaacatttacgagaggtaaagaagtacaaaccgtgagagaatctagggttgtctgaagattgagcgatgctttaagaagaaaac  11418300                                  ---------->DOF2                               --------->HSFB2a(2)                               <---------HSFB2a(2)                               --------->LBD16                               ------>ZmHOX2a(1)                              <---------LBD16                           --------->ARR11(3)                                                    ----                           <---------ARR14(2)                                                    <---                           --------->ARR14(2)                                                ------>ZmHOX2a(1)                      <-----------HVH21              <---------MYB46(3)                 --------->ANAC58                   <---------ANAC58             <------------CBF                        --------->ANAC58                   <---------ANAC58    <------------CBF                             --------->YAB1              --------------->AtSPL8  <------ZmHOX2a(1)                            ----------->HVH21         <---------CCA1(2)<---------CCA1(2)   --------->ARR11(3)                 --------->WOX13(1) -   aaaactcacccatatcgttgtacttgtcatatcctggaaaggattgaagaaattgtggttctctgttttgagagtgtccatatcaatgacaagtcctaaa  11418400                                                                           <-----------HVH21                                            <---------ATHB12            <---------ANAC58     <---------AHL20(2)               --------->TOE2(2)                 --------->ANAC55(2)     --------->AHL20(2)               --------->TOE1(2)                 <---------ANAC46     <---------AHL20(1)              <---------HSFC1(2)                 <---------AtLEC2     --------->AHL20(1)              --------->HSFB2a(1)                <---------ANAC58 --------->AHL20(2)                  --------->MYB46(3)                 <---------ANAC55(1) <---------AHL20(2)                  --------->HSFC1(2)             <---------ANAC58         <------- ----->AHL20(2)--------->At4g35610   <---------HSFB2a(1)            <---------ANAC58         <------- ------AHL20(2)<---------At4g35610 <---------GLK1(2)    <---------ZAT14<-----------------------TaNAC69(2) -------->AHL20(2)           <---------YAB1 <------ZmHOX2a(2)     <---------YAB1     --------->YAB1   tatttaataaattatgcagatggagacgatggtgatagaacctccgatcaattgagactatagcgattttgtttgcgtgtcaaacactgatactgctttt  11418500                                --------->ATHB51                                <--------ATHB1                                <---------ICU4                                --------->ATHB12                                -------->ATHB1                            <-----------RAV1(1)                                <------------ATHB5                <----------DOF2                               --------->ICU4              --------->CCA1(2)                               <---------ATHB12            <------ZmHOX2a(2)  <---------WRKY18(1)                               <---------YAB1             --------->AGP1 <------------AtMYB77                             --------->WOX13(1)           --------->ARR14(2) <---------ETT(2)  <-----                            ------------>ATHB5            <---------ARR14(2) --------->WRKY45  <-----     <---------ANAC46   <----------DOF2                   --------->ARR11(3) --------->WRKY12  <----- --DAG2            <-----------GT1       <---------YAB1   <---------ARR11(3) --------->WRKY38(1)----- ---DOF2         <-----------GT1--------->YAB1        ---------->DOF2   <---------At4g35610 ------>ZmHOX2a(2)   tggggttttgtgagggttttttctctctttccaatcattggtgatgaaaacttatccaaagatccaagctttgcaactgttgaccagactttgatcgaag  11418600                                                                                                   <-                                                                                          --------->ATHB12                                                                                         --------->AHL20(1)                                                                --------->MYB52(1)       <---------AHL20(1)                                                             --------->YAB1              --------->AHL20(2) ----TOE1(2)                                         ------->GAMYB                <---------ZAT18  <- ----TOE2(2)             --------->ANAC58            ----------->RAV1(1)      <---------ICU4    ----- ----TOE1(3)             --------->ANAC58           --------->MYB46(3)   <-------TEIL <-------------- ---->HSFB2a(1)        ---------->DOF2              <----------ID1      --------->CCA1(2)<---------AHL20(2)   gttttgttcaaagacttcaaatttccaaagccatgtttcaaatcgacaatggcaacgacaaaaacataacagagatacaaacattgcacattttattgga  11418700                   <---------DAG2                   <----------DOF2              <---------MYB46(2)      <---------TOE2(3)                                            <---------ZAT14     --------->MYB52(1)--------->ANAC46                            --------->ZAT14     <---------DOF5.7(2)                          ----------->GT1<---------ZAT14        <----------DOF2 --------ANAC58 ------>MYB83                    --------->ZAT2   --------->ZAT14     <---------TOE1(3) --------ANAC58 ------>MYB46(1)       --------->TOE2(3)        <---------------AtSPL8<---------TOE2(3) ---->ARR14(2)<---------MYB59         <----------DOF2    --------->AHL20(2) --------->YAB1 ---AGL3  --------->WRKY12        --------->REM1(1)--------->At5g28300     <---------YAB1   accgtgctaacgatgacctaactttacgaaaaaactacaactttagaacaagctgtgaataaaacagagtacagactatgagaaattaagcttttttggc  11418800  Previous    Next  AGI:  At1g31820.1    Description:  amino acid permease family protein. similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.2); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47427.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) Range:  from: 11416432    to: 11418260    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31830.1    Description:  amino acid permease family protein. similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT1G31820.1); similar to amino acid permease family protein [Arabidopsis thaliana] (TAIR:AT5G05630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66709.1); similar to hypothetical protein OsI_011979 [Oryza sativa (indica cultivar-group)] (GB:EAY90746.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47427.1); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine transporter I; (InterPro:IPR002293) Range:  from: 11418606    to: 11420818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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