Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ZAT6  ------->TEIL --------ANAC58                                                                                ------ --------ANAC55(2)             --------->YAB1                                                 ------- --------ANAC55(1)          --------->bZIP60(1)                                               ------- --------ANAC58  <---------ANAC58                          --------->MYB46(3)         ----------->GT1 ------->ANAC55(2)<----------DOF2          <---------TOE1(3)                         ----------->GT1 -----DOF2       <---------ANAC58          <---------TOE2(3)       <-------TEIL<---------------AGL15 ----DAG2<---------TOE2(3)  <---------bZIP60(1)           --------->SPL7      <-----------------AGL1   tacgtatcactaatgttttgcttttgaatcacatcataacattttgaggttttccatccgaaccacaaattcatattatgcctcaaactggaaaaatcgt  11390800     --------->TOE2(3)     --------->TOE1(3)   <---------TOE1(3)   <---------TOE2(3)                  <---------ZAT6  <---------DOF5.7(2)        ------>ZmHOX2a(2)  --------->MYB52(1)       --------->ARR11(3)                          --------->bZIP60(1)  <-----------GT1          <---------ARR11(3)                         <---------TOE1(3) --->TOE2(3)          <---------AHL20(2)                              <---------TOE2(3) -->YAB1              <---------AHL20(1)                    <---------ATHB12          <-----------HVH21 ---->GT1             --------->AHL20(1)            <---------AtLEC2 <-----------GT1 --------->ANAC46   aaattaacgttagaaaaccactaatatatgatcttatgtagagttcaaaagtttgcattgaaatcaatatttgacgttacaatgtctgcgtcagagtata  11390900                --------->ICU4      --------->ANAC46      --------->ANAC58               <---------TOE2(3)      --------->ANAC58           --------->CCA1(2)                                                <--   --------->MYB46(3)           <---------ARR11(3)           --------->YAB1                       --- <---------ARR14(2)             --------->ARR11(1)  ----------->GT1                           ------- --------->ARR14(2)         ---------->DOF2        --------->MYB59      --------->YAB1        <------   gcagaaccacgacttggcataattttggaataaagatttgacgaaaacattgtaaggtcacaatcacatcggaatcacaatatcgagatttgtcatataa  11391000          <---------AHL20(2)          --------->AHL20(2)         <---------AHL20(2)         <---------AHL20(1)         --------->AHL20(2)      --------->AHL20(1)      --------->AHL20(2)      <---------AHL20(2)      <---------AHL20(1)     --------->AHL20(2)                                                                          <---   --------->YAB1                               <---------ARR14(2)                               ---- <---------TOE2(3)                 --------->AHL20(1)                                            ---- -------AHL20(2)                   --------->ARR11(3)                     <---------YAB1        ----- ------>AHL20(2)                   <---------AHL20(1)      >>>>>>>>>>>>>>>>>LFY         <------MYB83 -->AHL20(2)   <-----------GT1    <---------AHL20(2)  ------->TEIL      <---------ICU4  <------MYB46(1) ---AHL20(2)  <-----------GT1 --------->AHL20(2)--------->ARR14(2)     --------->ICU4   ----------->GT1   tttaagaataaattatttaacacattttgtgtttatatatattgaaacagtatatgtatatagccaatgtggaattatgtctgtctcatttggtgaaaaa  11391100                                                                       ----------->HVH21                                                               ----------->RAV1(2)                                                              --------->GLK1(2)                                                            <---------AHL20(2)     ------>NtERF2                                         --------->AHL20(1)  --------->At4g35610                 <---------YAB1       --------->AHL20(2) ------AHL20(2)                     --------->YAB1         <---------AHL20(1) ----->AHL20(2)           --------->YAB1              <---------AHL20(2) ----->AHL20(1) --------->bZIP60(1)<---------YAB1     --------->AHL20(1)                            < ---->AHL20(2)  <---------bZIP60(1)--------->ICU4     --------->AHL20(2)                            -   aaattgctgcctcatttgatgtcatctataatgggccattataagaggcccataaataaaatataatctgggcctgacttactgagtttttgacccatag  11391200                         ============================HOX2a_HOX2a                         <------ZmHOX2a(1)                 <---------ARR14(2)           ----------->HVH21          ------>ZmHOX2a(2)            <---------YAB1          =========================HOX2a_HOX2a          ======================HOX2a_HOX2a         =======================HOX2a_HOX2a         <------ZmHOX2a(2)             --------->At4g35610         --------->CCA1(2)  =========================HOX2a_HOX2a                                 >>>>         ==========================HOX2a_HOX2a      >>>>>>>>>TBF1                       --------->HSFB2a(2)        --------->ARR14(2)  ===============HOX2a_HOX2a                           <------ZmHOX2a(2)        *TSS     --------->ARR14(2) <------ZmHOX2a(2)                           <---------ARR14(2)        <---------ARR14(2)  <------ZmHOX2a(1) <------ZmHOX2a(2)   --------->ANAC58      <---------HSFB2a(2)        --------->AGP1<-----------RAV1(2)   --------->GLK1(1)     --------->ANAC58------>ZmHOX2a(2)       <---------GLK1(1) ==================HOX2a_HOX2a       >>>>>>>>>TBF1      --------->ARR14(2) --------HAHB4 --------->HSFB2a(1) <---------ARR11(3)     >>>>>>>>>TBF1         --------->ARR11(3) -------->ATHB12 <---------MYB52(1)--------->ARR11(3)  >>>>>>>>>TBF1            <---------ARR11(3) --   aatcatttgagatccgaccgttctgcaggaggaagaagatcatcagagatcgaagaagaagaagaagaaggcaatgctcgaagatcgtttgtagaagaaa  11391300                                                                                                    <                                                                                                   --                                                                                                   ==                                                                                                  ===                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                               ------                                                                                             <-------                               --------->ALFIN1        --------->LBD16                  --------->ARR14(2)       --------->At4g35610   <---------MYB46(3)       --------->LBD16             <---------SPL7<----       <---------At4g35610   <---------DEAR3(2)       --------->HSFB2a(2)        <---------ANAC46<--- --------->MYB52(1)      ----------->HVH21            <---------HSFB2a(2)        <---------ANAC58<--- ------>MYB46(1)      <---------ANAC46      --------->LBD16                      <---------ANAC58---- ------>MYB83         <---------ANAC58     --------->DEAR3(1)                   --------------->AtSPL3 >>>>>MYB2 ----------->GT1  <---------DEAR3(1)       <---------LBD16            <---------------AtSPL8 ------->AtMYB61      <---------ANAC58    <---------LBD16            --------->ARR11(3) <---------ARR14(2)   accaaacgaagcagagtaacaatggcttcgacggtgggattagcaccggggctctcccggaaattgaagaaggtattggattgtcgtacagatagtccgg  11391400        <------NtERF2       <-----------HVH21      <---------DEAR3(1)      <---------ANAC46      <---------ANAC58      <---------ANAC58      <---------O2      <---------bZIP60(1)      --------->bZIP60(1)      <---------bZIP60(2)     --------->ATERF1(1)     <------NtERF2   <---------DEAR3(1) -----------RAV1(1) ---->ZmHOX2a(2) ================================HOX2a_HOX2a ================================HOX2a_HOX2a ----ZmHOX2a(2) ----->GLK1(2)                                          --------->ANAC58 --------ARR10                                          --------->ANAC58 ----->ARR11(3)                                        <---------LBD16 ------ARR11(3)                                     --------->ANAC58 -----ARR14(1)                                      --------->ANAC58   <------ZmHOX2a(2)          --- --->LBD16                <---------YAB1       --------->ZAT14        --------->ARR14(2)         <--- --LBD16--------->ATERF1(1)                    <---------ZAT14        --------->AGP1--------->CCA1(2) -----CCA1(2)             ------>ZmHOX2a(1)    <---------ZAT18<---------GLK1(1) <---------HSFB2a(2)== ------AGP1              --------->TOE2(3)--------->ZAT14     --------->GLK1(1) --------->HSFB2a(2)<- ------ARR14(2)    <---------DAG2         <---------ZAT14----------->GT1      <------ZmHOX2a(2)  ---- ----->ARR14(2)    <----------DOF2--------->ANAC46  --------->ANAC46  <---------ARR14(2)     <-------   atctggtggcgtcgcttaacgctttatcctcattctacgacgagaacagtgctcacgcacggagaaatctcagatcgacgatcgagaaacgagcgcttca  11391500                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   <-                      <---------ZAT2                                                               <-                      <------NtERF2                  --------->ALFIN1                             <--                      --------->At4g35610          <---------ANAC58                               <--                      <---------At4g35610          <---------ANAC46                               <--              ===============================HOX2a_HOX2a                                          <--              ================================HOX2a_HOX2a                                         <--              ------>ZmHOX2a(1)                    <---------ANAC58                               <--             --------->TOE2(3)                   ------>ZmHOX2a(2)      <----------DOF2           <--             <---------ANAC55(2)                 ================HOX2a_HOX2a                      <--         --------->GLK1(1)                       ===================HOX2a_HOX2a             <-------- ------>AGP1 --------->TOE1(3)         =============================HOX2a_HOX2a             <-------- ------At4g35610    <---------RAP2.6(2)==========================HOX2a_HOX2a      <-----------RAV1(1) ====================HOX2a_HOX2a       ------>ZmHOX2a(2)     <------ZmHOX2a(1)    <---------MYB46(3)- -----ZmHOX2a(2)   <---------LBD16    ==============================HOX2a_HOX2a  <---------WOX13(1)<- ----->At4g35610---------->DOF2       <------ZmHOX2a(2)   <------ZmHOX2a(1) --------->At4g35610   <-- ----HVH21   --------->ANAC55(2)      ===========================HOX2a_HOX2a<---------At4g35610  <---   gatcaacagtgagttccttaacgcggctgattcgactcagatcgcattggatcgcgtggaggaggaagtgaatgctttagctgattgttgcgataagatt  11391600     ------>NtERF2   <------NtERF2   --------->ATERF1(1)   --------->RAP2.3(1)  ------>NtERF2  <---------RRTF1(1)  <---------RAP2.6(1)  <---------ATERF1(1)  <---------RAP2.3(1)  <---------DEAR4(2)  <---------ORA47(2)  <---------ERF1 <---------RAP2.3(2) <---------RAP2.3(3) <---------RRTF1(2) <---------ATERF1(2) --------->ATERF1(2) <---------RRTF1(3) --------->ALFIN1 --------->DEAR3(1) <---------DEAR3(1) ------NtERF2 ----->NtERF2             --------->ZAT6 ---------ABI4(1)        --------->MYB46(3) --------RRTF1(1)       -------->P --------ATERF1(1)   --------->At4g35610 --------ERF1        <---------At4g35610 -------ANAC58       <------NtERF2 -------ANAC46      <---------ATERF1(1) -------ANAC58      ------>NtERF2 -------RRTF1(3)  --------->LBD16                                                                   < -------RAP2.6(2) <---------LBD16                                                                   - -------RRTF1(2) <---------ANAC46                                        <---------TOE2(3)         -- -------DEAR3(1)<---------LBD16                                          <---------TOE1(3)         <- -------RAP2.3(2)<---------ANAC58                                    <---------ANAC58              -- -TOE2(3)     --------->ARR14(2)                                     <---------ANAC58             --- -YAB1        <---------ARR14(2)                                   --------->ARR11(3)             --- -------->ATERF1(1)<---------DEAR3(1)   <---------YAB1             <---------ARR11(3)            <--- --------RAP2.3(1)<---------At4g35610<---------AHL20(2)      --------->ANAC58                   <---- -------RAP2.3(3)<---------ANAC58    --------->ICU4          --------->ANAC58         --------->At4g35610 ------LBD16----------->ARR10        <---------YAB1        ---------->DOF2----------->GT1       -----   gcggcggcgctaagtagttccgcggctaccactagcgatattattagtactactgagaggctaaagcaagagcttgaggttactactcagaggcaagaga  11391700  Previous    Next  AGI:  At1g31780.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94646.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63439.1); similar to Hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:AAN52749.1); contains InterPro domain Conserved oligomeric complex COG6 (InterPro:IPR010490) Range:  from: 11391208    to: 11394729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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