Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------------AGL15                                                        --------->ANAC58                                                    -------->P                                                   ------->GAMYB                                       <---------ANAC46 ------>MYB83                                       <---------ANAC58 --------->ANAC58   --------->MYB52(1)           <-----------HVH21 <---------MYB111(2) ------->DOF2                  <---------TGA2(1)  <---------MYB52(2)                            <---- ->GAMYB                       --------->bZIP60(1)--------->MYB46(3)                            <---- --->TOE2(3)                   --------->TGA2(1)  <---------MYB111(1)                           ===== -->MYB46(3)         --------->TOE2(3) <---------ANAC58 ------>MYB46(1)                <---------At4g35610 >AtSPL8   ----------->GT1     <---------bZIP60(1)<---------MYB55(2)     ---------->DOF2   ----------   caaagaaaccgaatggaaaacatcgttagaatgatgtcatgtcttgtaatcaactaccaagctatttgaagaagagaaagaaatacttctgatgagattt  11377400       --------->REM1(1)      <-------TEIL                                       <---------ALFIN1  <---------------AtSPL8                                 --------->ANAC46  <---------TOE1(2)                                    --------->ANAC46 <-----------RAV1(2)  <---------ZAT2                   --------->ANAC58 <---------ANAC46     <---------At4g35610              --------->ANAC58 -----MYB46(3)        --------->ZAT2            --------->ANAC58 -------RAV1(1)       --------->At4g35610       --------->ANAC46 ============RAV    <-----------RAV1(2)         --------->ANAC58     --------->CCA1(2)--------->At4g35610 ->ARR10      ---------->DOF2  --------->AHL20(2)      <---------ALFIN1      <-------TEIL      <-----   gttgcaggtacaactcaaaagctcagcagaaaataaaacaagaagtgatcaagacacacacaccttgagagttatgggatacatagacatctggagacca  11377500                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                    <---------CCA1(2)                                                  <---------------AGL15                                         <---------ANAC58                                         <---------ANAC46                                         <---------ANAC58                           <---------ZAT14       <-----------------AGL1                       <---------------AtSPL8  ----------->HVH21--------->TOE2(3)           --------->YAB1  --------->ZAT14  <---------ARR14(2)  --------->TOE1(3) ------RAV1(2)<---------TOE1(2)       ---------->CDC5--------->ARR11(3)           <---------ALFIN1   ggttgtgaagtaatcgtagggaaggctagtacagacttgctctgcgtgtctgacatatctggcaaaccttgaaccatgactccaccatcttcttcaggcc  11377600                                            --------->ZAT14                                            <---------ZAT14                                          --------------->AtSPL3               <---------MYB52(1)                        <---------YAB1    --------------->AtSPL8              <---------RAP2.6(3)   -                      <---------ICU4    --------->GLK1(2)                    <---------MYB46(3)     <                     --------->ICU4    <---------GLK1(2)                   ------>NtERF2     <-------           <---------ARR14(2)  ------>ZmHOX2a(1)                    <-----------RAV1(1) <----------DOF2           --------->ARR14(2)----------->RAV1(2)      ------>ZmHOX2a(1)    <---------At4g35610  -----   ttggtgctatgcagttctgaggcatgatgactcctgaaccagtttctgtactcgtccttgtatttgttaactgttgcagccgttgtgatgcttttatgga  11377700                                                                           *TSS                          ----------->GT1                               ---------->DOF2                       ---------->DOF2     <---------ANAC58          --------------->AGL15                 --------->YAB1   --------->ANAC58                   <---------------AGL15         --                 ----------->GT1  --------->ANAC58                  ----------------->AGL1         --              --------->MYB52(1) --------->DAG2      <----------DOF2----------------->AG          <-- -------->ARR11(3)   --------->ANAC58      <---------ANAC58         <-----------------AGL1       ---- ---------ARR11(3)   --------->ANAC58      <---------ANAC46      ------>ZmHOX2a(2)           <-------MYC3 --TOE2(3)   ------>ZmHOX2a(1)  ---------->DOF2----------->GT1  <---------GLK1(1)            ------->MYC3 ----->DOF2  --------->ICU4--------->TOE1(3)<----------DOF2    <---------ARR11(3)        <---------At4g35610   aagctcttaatggtcctaatggtaagaaagcttaaaaagcaagtggctttggtaactttcttcttgatctccctcaaagggaaaccatgtgagcacatga  11377800 ------->ARR11(3)                        <-----------GT1            --------->DAG2 ------->AHL20(1)            --------->ANAC58         <---------REM1(1) ---------TBP                --------->ANAC58         ----------->GT1                          ------ --->TEIL                    <---------ALFIN1  ------>ZmHOX2a(1)   ---------->DOF2    --------->AtLEC2   atatatagtagtatggaaaacaccctctcacacacacttagaattactcctctgtgttgtaagaacagaaaaaggaagagagagagacatacaaaaaaaa  11377900                                               <----------DOF2                                               <---------DAG2                                         --------->PCF2                                      <------MYB83                                      <---------DEAR3(2)                        <---------AHL20(2)                                     <---------MYB46(3)                        --------->AHL20(2)                                    <---------ANAC46                           <---------AHL20(2)                        --------->WOX13(1)  <---------ALFIN1                   <---------AHL20(1)     <----------DOF2  <------ZmHOX2a(2)<---------PCF2                   ----------->GT1           <-- <----------DOF2      <---------ATHB12<------MYB46(1)               <----------DOF2   ---------->DOF2 ---->DOF2  <-----------RAV1(1)  <-----------RAV1(1)           <----------DOF2 --------->AHL20(1) <--   aggctttctttactatgttggccgatcaatcgtctatggtgggttcccactttctctatctctcactttccttttggttaatttattctaaagctaactc  11378000                                             <---------ARR11(3)                                             --------->GLK1(2)                                         --------->YAB1                   <---------CCA1(2)    <---------YAB1       --------->AHL20(2)             --------->YAB1     ------>MYB46(1)       <----------DOF2  <---------GLK1(2)     ------>MYB83 ------>MYB46(1)     <---------ICU4   <---------MYB59------>MYB83       --------->ICU4 --------->ZAT6                               <--- -------DAG2    <---------MYB59      <---------ATHB12                           --------->ATHB12----- --------DOF2<-----------GT1   ---------->ID1<-----------ARR10                 <---------YAB1   <----   ctttaccaaatatttatacctatctcttcctttgttccaattatcagaatcttacctctaattccaaatagttttaaggccatgaatggatgctgttttt  11378100                      <---------AHL20(2)                     <---------AHL20(2)                     --------->AHL20(2)                    <---------YAB1          --------->ATHB12                                          --------->ARR11(3) ------AHL20(2)<------MYB46(1)                           <----------DOF2                    --------- ---->AHL20(2) <------MYB83               --------->ARR11(3)        <---------ARR11(3)    ---------->DOF2 -----AHL20(2) ----------->GT1            <---------ARR11(3)        <---------GLK1(2)  --------->LBD16   aaattcagtttttgatttggttattaattagtttttgactattagattttagttatagactttgttgttagatttttgttttaaaaacccccaaaaacgg  11378200                          --------->TOE2(3)                         ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <---------ANAC55(2)                        <-----------------------TaNAC69(2)                        <---------TOE2(3)     <---------GLK1(2)                    --------->YAB1      --------->ZAT6                   --------->ARR11(3)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 --------->GLK1(2)                  >>>>>>>>>>GT-3b ----------->GT1                        <---------ARR11(3)       <--        <---------YAB1 --------->MYB52(1)     --------->ARR14(2)    ----------->GT1  <---------ZAT14 >MYB52(1)   ---------->DOF2      <---------ANAC46            <------ZmHOX2a(1)      --------->ZAT14   tttttggtttttgataaaagaaaaataacgtaaatggagtaaacactagattccctaaattataggagaattgaaaatctaaaatcgtgaactgtagatt  11378300  Previous    Next  AGI:  At1g31770.1    Description:  ABC transporter family protein. Identical to White-brown complex homolog protein 14 (WBC14) [Arabidopsis Thaliana] (GB:Q9C6W5;GB:Q9C6R7); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT4G27420.1); similar to ABC transporter-like protein [Brassica rapa] (GB:ABB97034.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63733.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70956.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 11374874    to: 11377775    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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