Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->LBD16                                                    ------>NtERF2                                                   ------->GAMYB                                                   --------->ANAC46                       <-------TEIL                --------->RAP2.6(2)                      --------->CCA1(2)            --------->ANAC58                     --------->ARR14(2)            --------->ANAC58         ------->TEIL--------->AGP1               --------->MYB46(3)      --------->AtLEC2<------ZmHOX2a(2)       <---------ATHB12                         ----------->RAV1(1) ---------ARR11(3)   <---------ARR11(3)   --------->YAB1                            --------->ANAC58 -->AtMYB61          --------->ARR11(3)  <<<<<<<<<ARR2                              --------->ANAC58 >GAMYB<-------TEIL  <---------ARR14(2)--------->WOX13(1)                           --------->ANAC46 ->MYB46(3)  <-----------GT1     --------->ANAC46--------->At4g35610                --------->AtLEC2   aagataacatgcattttactcaagatccatgttctacataacaatcaaatcatccgccactaaaatgcttaatcgatttagtttacatgcaacaattcct  11373100                                           ----------->GT1                                         ---------->DOF2             <---------ARR14(2)       --------->ANAC58             --------->ARR14(2)       --------->ANAC58            ------>MYB83              --------->ANAC46            ------>MYB46(1)       --------->CCA1(2)          --------->AtMYB61       <------ZmHOX2a(2)          ------->GAMYB          --------->AGP1         --------->MYB46(3)      <-----------ARR10        -------->P               --------->ARR11(3)        --------->ANAC58         --------->ARR14(2)         --------->At4g35610        --------->ANAC58         <---------ARR11(3)      ---------->DOF2    --------->ANAC58             <---------AGP1     --------->TOE2(3)          <---------LBD16    --------->ANAC58             <---------ARR14(2) --------->TOE1(2)         ----------->RAV1(2)  ---------->DOF2      <-------TEIL------>ZmHOX2a(2)--------->TOE1(3)     <---------MYB52(2)   tctctaaagcaaccaaatccctaagttcataaacagatctacgcaaagtaaaaaccttagaaagctccaaaatcaaacaaacctggagattgtgaagctt  11373200                                                                        ----------->HVH21                                                                    --------->ZAT2                                                                 <---------ZAT2                                                                 --------->At4g35610                                                             --------->ZAT2                                                             <---------ZAT2  <---------LBD16  <------                                                             --------->STY1(2)   --------->SPL7    <-                                                         --------->ZAT2<-----------HVH21      -------                                                    <---------------------WRI1 ----------->HVH21   <-                                                   --------->LBD16  <---------At4g35610       -------                            --------->MYB46(3)     ------>NtERF2 --------->ZAT2--------->LBD16-------                          --------->ARR14(2)      <---------DEAR3(1)--------->At4g35610       <------                          <---------ARR14(2)     <---------LBD16 <---------At4g35610         <-------                      --------->At4g35610   <----------DOF2  <---------STY1(2) <---------SPL7<-------   cacatactcccaaactttcttcagagcggaaccacgagtgagttccctttctccggcgaagctagctagctgctgtgacaccggacgagtcttgaatatc  11373300                                       ------>NtERF2                                       <---------ATERF1(1)                                      --------->RAP2.3(2)                                      --------->DEAR3(1)                                      --------->RAP2.3(3)                                     --------->ERF1                                     --------->ATERF1(1)                                     --------->DEAR4(2)                                     <------NtERF2                                     --------->ORA47(2)                                     --------->RAP2.3(1)                                    <---------ATERF1(1)                                    <---------ORA47(2)                                   <---------DEAR3(1)         <---------LBD16         <-----------HVH21 ---ARR14(2)           ------->GAMYB<---------RAP2.3(1) --------DAG2         --------->MYB46(3) -->KAN4(2)           <------------MYB.PH3(1)                                                  <----- ---------DOF2       <---------At5g28300                <---------ANAC46               ------>NtERF2 -->ARR11(3)         --------->RAP2.6(3)<------NtERF2 <---------ZAT14                  --------->LBD16 -->ARR14(2)        --------->MYB52(1)--------->RAP2.6(2) ------>ZmHOX2a(1)           --------->ANAC58 ---ARR11(3)   <---------ZAT14  ------->GAMYB         --------->ZAT14                 --------->ANAC58 --GLK1(1) ------>NtERF2       --------->MYB46(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC46 --KAN4(1) --------->LBD16 <------NtERF2--------->ATERF1(1)  ------->TEIL            <---------LBD16   ccttttccttctccggctacagtaacggcctcaacagtcgccgccttcgacatcagtgtcctgaaccctcccaaaaccctagaaattcccgccatttttt  11373400                --------->ANAC46     ---------->DOF2   --------->LBD16 --------->MYB52(1)  --------------->AGL15  <---------------AGL15                                                                ---------->DOF2 ----------------->AGL3                         --------->MYB46(3)                   --------->ANAC58 ----------------->AGL2                    --------->TOE2(3)    *TSS                 --------->ANAC58 ----------------->AGL1            ----------->GT1  ------->GAMYB      <---------DEAR3(1) ----------------->AG--------->MYB46(3)    --------->TOE1(3)  ----------->GT1    --------->CCA1(2) ----AHL20(2) <---------MYB52(2)   --------->At4g35610      ----------->GT1     <----------ID1    ---   atttccgaaaagagaaacaaacaacgactagagaagaagctaaaaccctaacaacagtcaaatagagaaaaattcggcgagagagacaagaaagactctt  11373500                                                                             <------ZmHOX2a(1)                                                                           <---------TOE2(3)       ------>ZmHOX2a(2)                                              --------->ICU4      <------ZmHOX2a(2)                                               --------->AHL20(2)        <----     <---------ARR11(3)                                        --------->MYB52(1)             -------     --------->ARR11(3)       --------->YAB1  <---------ARR14(2) --------->ANAC58            <------- ------->DOF2              <----------DOF2 ----------------->AGL1--------->ANAC58            --------   aaaagaagatcgctaaactcattttgggcctttcataaactatgggcctatttgggcttcataaaaaacgaaatatttaggatgttttatcgaaattaaa  11373600                                                                                     <---------TOE2(3)                                                                                    --------->YAB1                                                                                   --------->ICU4                                                                                 <---------ICU4                                                                                --------->AHL20(2)                                                                                <---------ATHB51 -----TOE2(3)                                                                   <---------AHL20(2) --->DOF2                                                              ---------->DOF2 <------ZmHOX2a(1) --AHL20(2)                       --------->At4g35610  <---------ARR14(2)       --------->ICU4 ->AHL20(2)            --------->AHL20(2)           ----------------->AGL1 ----------->GT1   ggtaaatgtaagagctaatgtgcaatttaagaagatagctaaaattcagtttgggcctatttgggcttcagaaaaaagagaaataattaggatgtttatc  11373700                                                                     <------NtERF2                                                                    ------>NtERF2                                                                  <---------ABI4(2)                                                                --------->ANAC58                                                                --------->ANAC58                                            <----------DOF2     --------->ANAC46               <-----      ----------->GT1                     ------->TEIL        --------->MYB52(1)          <---------MYB52(1)     <---------TOE2(3)           --------->AHL20(2)      ----------->HVH21               <---------SPL7   ---------->DOF2 ----------->GT1<---------AHL20(2)  <---------DEAR3(1)                <---------DREB2C(2)   gaaaataaaggtaaaatgtaagggttaatatgcaatttaaaatgaacttttagtcttcggtgacaaacggcaccgtttaatagtttgatgccggtcgcta  11373800                                                               <---------MYB52(1)                                                              <-----------HVH21                                                             --------->DEAR3(1)                                                         ----------->HVH21                                                        <-----------HVH21                  <-----------HVH21                     <-----------TGA1                 --------->DEAR3(1)                    <---------ANAC58             <---------HSFC1(2)                        --------->bZIP60(2)           --------->ARR14(2)                          <---------ANAC58           <---------ARR14(2)                         ------>NtERF2          --------->ATERF1(1)                      --------->ZAT2          <------NtERF2                            ------>NtERF2<---------WRKY12         <---------MYB46(3)                        <---------ZAT2        <---------ANAC58                           --------->At4g35610        <---------RAP2.6(2)                        <---------At4g35610        <---------ANAC46                          <---------DEAR3(1)        <---------ANAC58       <---------ANAC46--------->ANAC46--------->DOF5.7(2)      ---------->DOF2       <---------LBD16         --------->DEAR3(1) --------->DEAR3(1)                --------->TOE2(3) -----DOF2<-------GAMYB----------->RAV1(1)----------------------->TaNAC69(2)     <---------GLK1(2)   ttcgtacatggcggatgctccgtcgcaacatcgccgtagagagtcttcttcgccgctgcgtcaccgtcaacttggatgagacatattcttaaaaggagaa  11373900                --------->TOE1(3)                --------->TOE2(3)   <-------GAMYB                                        <---------ANAC58             --------->GLK1(1)     <---------MYB46(3)                           <---------RVE1(1)             <---------GLK1(1)     ----------->GT1                             --------->ARR11(3)       <---------ANAC46           <--------P                                   <---------GLK1(2)      <---------MYB46(3)        <---------MYB46(3)                             <---------ARR11(3)     <---------ANAC46           --------->MYB55(2)                    --------->ZAT18    <---------ANAC58  --------->ALFIN1       <---------GLK1(1)                            <---------ZAT18  --------->ARR11(3)   cgatgtggtgagtggaaaccctaatcgatatcagtggttgttaaatgtattagttgattttagttgtcttagtctactagagatttttagttcttgtctc  11374000  Previous    Next  AGI:  At1g31760.1    Description:  SWIB complex BAF60b domain-containing protein. similar to SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G35605.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63736.1); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) Range:  from: 11372406    to: 11373464    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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