Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->LBD16                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                  <xxxxxxxxx                                                 <---------ARR11(3)                    <-------MYC3                                                 <---------GLK1(2)                     ------->MYC3                                             ------>ZmHOX2a(2)                     <-------TEIL                                            --------->CCA1(2)                   <------MYB46(1)                                            <------ZmHOX2a(2)                  --------->MYB111(1)                                           <---------ARR11(3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                           <---------AGP1                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                           --------->AGP1   --------->GLK1(1)  --------->MYB59                                           <---------ARR14(2)     <---------ICU4<------MYB83                                           --------->ARR11(3)    xxxxxxxxxxxxxxxx>smallRNA(i) ---->GLK1(1)                   --------->ARR14(2)--------->GLK1(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ----ARR11(3)      <---------AtLEC2        --------->ARR14(2)  --------->YAB1 <--------P <-------TEIL --->ARR11(3)    <---------YAB1 <---------ARR14(2)<---------GLK1(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ctccatacattccttcattttgaatggttttcaagaaccgaataagatctagatttccagagaaatcatattgacgacgagtaggttcatgtgcattcca  11369500                                                        ------>NtERF2                                                       --------->LBD16                                                     <---------LBD16                                                     ------>ZmHOX2a(2)                                                    --------->CCA1(2)                                                    --------->ARR14(1)                                                    <------ZmHOX2a(2)                                                   --------->ARR11(1)                                                   <---------ARR11(3)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                   --------->ARR11(3)                                                   --------->AGP1           ----------->GT1        <-                                           <----------DOF2----------->RAV1(1)                      --                          xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->REM1(1)                     <--                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ALFIN1---------->DOF2        ----               ------>ZmHOX2a(2)           --------------------->WRI1 ----------->HVH21         ----- xxxxxxxxxxxxxxsmallRNA(si3)     <----------DOF2 ----------->ARR10    <----------ID1         --------   aaaaacataagtctcgatcgcatcaagacttccttctttgcccttctttataagatccggccacatctaaatgtgacaaagtaacaacaaaataaacgca  11369600          --------->YAB1       --------->YAB1    --------->YAB1   --------->AHL20(2)         <---------AHL20(2)                                 --------->YAB1   <---------AHL20(2)     --------->AHL20(2)                                  --------->HSFB2a(2) --------AHL20(2)        --------->AHL20(1)                  <-----------GT1  --------->HSFC1(1) ------->AHL20(2)        <---------AHL20(1)    <---------TOE1(3)              <---------HSFB2a(2) -------MYB52(1)        --------->AHL20(2)    <---------DOF5.7(2)          <----------DOF2      <xxxx ----->At5g28300 <---------YAB1        <-----------GT1<---------REM1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------>GT1   <---------YAB1  <---------YAB1--------->DOF5.7(2)      --------->ALFIN1           <xxxx ->ANAC46 --------->TOE2(3)  --------->AHL20(2)<---------TOE2(3)--------->TOE2(3)<------ZmHOX2a(1)   gttaattaataatcttattatgctaaatatatataatagattaaccattaacgtagatgtaagttacctcagtggtgcttctaggataatggatagaacc  11369700                                              <---------YAB1                                            --------->YAB1                                            <---------ICU4          --------->ANAC46                                           --------->ICU4      <---------SPL7                --------->WRKY38(1)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                --------->WRKY12     --------->ANAC58         <---------ANAC46      <---------ARR11(3)             --------->ANAC58         <---------ANAC55(1)      --------->ARR11(3)        <---------bZIP60(1)           <---------ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->bZIP60(1)      <-----------RAV1(1)             ----------->RAV1(1) xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                --------->ANAC46 xxxxxxxxxxxxsmallRNA(i)   --------->YAB1--------->AtMYB61    <---------ANAC58        --------->ANAC46   agagagaagaactcgacgatgaccatcaatagtgatggcacgaccatcatgagagacgattgtggcgtatgcacaactacttactaaaacacaacacaaa  11369800                                                                                                <----                                                                                              -------                                                                                              -------                                     <----------DOF2                                          <------                                  <-----------GT1----------->GT1                             --------                                <---------HSFB2a(1)   ----------->GT1            <<<<<<<<<<<<<<<<<LFY                         <---------ANAC46     <---------AtLEC2   <<<<<<<<<<<<<<<<<LFY        --------            >>>>>>>>>>>>>>>>>LFY--------->HSFB2a(1) ---------->DOF2    ----------->GT1 ----------->GT1   ataaaacttagagaaaccattgttgttatgtagaattttctttttcttgaatggaaaagaaataagagaacaatggtatatatagacattggaaaaaatc  11369900                                                                                                    <                                                                                                 ----                                                                                                <----                                                                                                <----         <---------GLK1(2)                                                                     ------     ---------->DOF2                                                                           <----- --------->ANAC55(2)                                            --------->ATHB12               ------ <---------ANAC46                                            <------------CBF                <------- <---------ANAC55(2)                                       --------->ARR11(3)          --------->AHL20(1) -----ICU4                                                 <---------ARR11(3)        --------->AHL20(1) -->GLK1(2)                      <---------YAB1           <<<<<<<<<RAP2.2            <---------AHL20(1) -->ARR11(3)        --------->GLK1(2)             <------------CBF    --------->ARR11(3)<---------AHL20(2) ---ARR11(3)       --------->ARR11(3)           <---------AHL20(2)   <------ZmHOX2a(1) <---------AHL20(1) ->RVE1(1)         <---------ARR11(3)           <---------YAB1 <---------YAB1       --------->AHL20(2) ->CCA1(1)       <---------TOE2(3) --------->ARR11(3)    ----------->ARR10      >>>>>>>>>>GT-3b------   ttgacgtaaaagattatttgagattttgttgaaatatgattttgtaagttttaattgtttagatattgataggattttgaagaaaaatatatattttacg  11370000      <---------At4g35610 ---------At4g35610 ----->TGA2(2) -------HVH21 -------TGA1                <---------ALFIN1 --->bZIP60(1)             <---------ALFIN1 ----ANAC55(2)            --------->LBD16 --->ANAC46           --------->ANAC46                                                              < ----GT1          <-----------HVH21                                    <---------AHL20(2)           - --->ANAC55(2)   <----------DOF2     ----------->RAV1(1)      --------->YAB1 ----------->TGA1--------   tcatatgcttctgcgatacctttcactccccaacttcaacaacatttccacttcaaaatcgaaatcatagtatttttttctgacgaaaaaaaaaaaaaaa  11370100                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                                                  ----------->HVH21                                                                --------->ZAT2                  <-----------RAV1(1)                           <---------At4g35610                <------------CBF                                <---------ZAT2               -------->ATHB1                                   --------->At4g35610               --------->ATHB51                             --------->TOE2(3)               --------->YAB1                             <---------ARR11(3)       <-----------GT1                                    --------->ARR11(3)                    <----     <---------YAB1                                       --------->GLK1(2)                     ----- ---------At4g35610                                       <-----------ARR10                     ----- -------->At4g35610 <---------ANAC46                     --------->CCA1(1)                      <---- ->AHL20(2)   <---------YAB1   <-----------GT1           --------->RVE1(1)                 --------->MYB52(1)   tcagcttattatccctattattgtgggtttatttatccatttagtttttcacttagaaaaaatcttagctgacttggtaaacacaaaaaaaaaaaacaga  11370200                       <-----------GT1        --------->GLK1(2) <----------DOF2 -----ARR14(2)      <---------ARR11(3)                --------->ATHB12 ---->ARR14(2)      --------->ARR11(3)        --------->ARR11(3) ---->ARR11(3)      <---------GLK1(2)         <---------ARR11(3)           <---------AHL20(2) -----GLK1(2)--------->AHL20(2)              --------->YAB1               --------->YAB1   ttttgaaaataatcttttaatagattttctttcttacaaattccaaatgatattgttcattggaattatacacctatattaatctcgatggagaactcga  11370300                             <---------ARR11(3)                             --------->ARR11(3)                          <---------CCA1(2)                         --------->LBD16                        <---------ANAC55(2)                        <---------ANAC46                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR14(3)                    <---------ARR11(3)                    --------->ARR14(2)                    --------->ARR14(3)                    <---------ARR14(2)                    --------->ARR11(3)      --------->AHL20(2)                   <---------GLK1(1)        <---------AHL20(2)    <---------GLK1(1)                   --------->GLK1(1)       <---------AHL20(2)     --------->GLK1(1)           -------            <-----------RAV1(1)          --------->YAB1   <---------AHL20(2)           --------->TOE2(3)            <---------MYB46(3)  <----------DOF2           --------->AHL20(2)      <---------AHL20(2)         <-----------RAV1(1)<---------CCA1(2) <---------YAB1     <---------GLK1(2)<---------YAB1   ttacaacaattttgttgttggagatcccgtatatctttcccaaaaattatttttgaaaatttaaacagatttctctaaatccatattattctcaatattc  11370400  Previous    Next  AGI:  At1g31740.1    Description:  BGAL15 (beta-galactosidase 15); beta-galactosidase. Identical to Beta-galactosidase 15 precursor (BGAL15) [Arabidopsis Thaliana] (GB:Q9C6W4); similar to BGAL8 (BETA-GALACTOSIDASE 8), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT2G28470.1); similar to BGAL1 (BETA GALACTOSIDASE 1), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT3G13750.1); similar to BGAL7 (beta-galactosidase 7), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT5G20710.1); similar to Beta-galactosidase precursor (Lactase) (GB:P49676); similar to unnamed protein product [Vitis vinifera] (GB:CAO65207.1); similar to beta-galactosidase [Mangifera indica] (GB:CAJ09953.1); Range:  from: 11365266    to: 11369889    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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