Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------AHL20(2)                                                          <---------AHL20(2)                                                          <---------AHL20(1)                                                          --------->AHL20(1)                                                          --------->AHL20(2)                                                         --------->AHL20(2)                                                        <---------YAB1                                                      <---------ICU4                                                      -------->HAHB4                                                      --------->YAB1                                               --------->ANAC58                                               --------->ANAC58                                    --------->DAG2   <---------ATHB12                                   ---------->DOF2   --------->ICU4                            --------->DAG2   <------ZmHOX2a(1)  <---------YAB1 ---------->GT1            ---------->DOF2 <---------TOE2(3) <---------YAB1                <---------   aatggtttatataaaactggtccaagactaaaagtgataaagttttaggaagcaaatgattatattattctagttcatattagaagtttggcatcaggtc  11359200                    <-----------GT1                   <XXXXXXXXXXXXXXXXXXXXMIR2937                  <---------AHL20(2)                <---------YAB1                                                                <------              --------->ATHB51                                                             --------->YAB1              <---------ICU4                                                               --------->AHL20(2)              <---------AHL20(2)                                                          <---------ATHB51              --------->AHL20(2)                                                          <---------ATHB12             <---------YAB1                                                         ------>ZmHOX2a(2)        ----------->GT1                                                            --------->GLK1(1)  --------->At5g28300                         <----------DOF2                 <---------ANAC46<------ --------------->AGL15                     --------->ARR11(3)                 <---------ANAC58------- <---------------AGL15                     <---------ARR11(3) ----------->RAV1(1) <---------ARR11(3) --RAV1(2)   --------->ICU4              ------->TEIL        <----------ID1   <---------ANAC58-------   ttactgtaatttgtaattattttttcaatagtttttgttaatgaacatctttcatttttgtaaacaacaaaatggttctggcctgatctccaataatata  11359300                                           --------->AHL20(2)                                        --------->AHL20(2)           --------->AHL20(2)           --------->YAB1         ----------->GT1             --------->YAB1         <---------ANAC55(2)        <---------YAB1                --------->AHL20(2) ---AHL20(1)                      --------->YAB1         --------->YAB1 ---AHL20(2)                   --------->YAB1   ----------->GT1   <---------AHL20(2) -->ARR11(3)               ---------->DOF2 <---------AHL20(2)    --------->ICU4 -->AHL20(1)       --------->TOE2(3)--------->ICU4       --------->TOE2(3)   tagtccaagataagtaaataacataaactaaaagaataataataaaaaaatggtttcaatcttagtaattttttaaaacaatttcaaaccgaattcaaaa  11359400                                                                                                  ---                     ------>MYB83                                                                 ---                     ------>MYB46(1)                                                             <---                   <---------MYB59                                                              <----                  --------->MYB46(3)                                                          -------                ------>MYB83                                       --------->REM1(2)         --------                ------>MYB46(1)                                  --------->LBD16             <-------              <---------MYB59                                   <---------ANAC46             <-------             --------->DEAR3(2)              --------->MYB52(1) ----------->GT1            --------->LBD16           --------->TCP20          <---------YAB1            <---------At5g28300        <---------LBD16           --------->ARR14(2)     --------->AHL20(2)         <-----------GT1            --------->MYB52(1)           <---------ARR14(2)    <---------YAB1      ----------->GT1               --------->AHL20(2)   tttcaacattgtggaaccgaaccaaactattttctattatttatgccaaaccgaatcgaaaatttaccgtgaaaactcaaacgaataaaaaaccggattc  11359500                                                                ----------->RAV1(2)                                                              --------->DEAR3(1)                                            <---------ANAC58 --------->DEAR3(2)                                     <---------MYB46(3)      --------->ATERF1(1)      <---------ALFIN1               <------MYB46(1)        --------->ATERF1(1)      --------->AtMYB61              <------MYB83          <---------PCF5     --------->MYB46(3)          --------->ALFIN1          --------->TCP15(1)   <-----------GT1             <---------ANAC58            <---------ATERF1(1) ------>LBD16                  <---------ANAC58            <---------PCF2 -------->GT1                  <---------ANAC46           ----------->HVH21 ------ANAC46                --------->ANAC58             <---------SPL7 -----LBD16                  --------->ANAC58       <------------CBF -->GLK1(2)                  --------->ANAC46      <----------DOF2 ->ARR14(2)           <---------ZAT6<---------AtMYB61  <---------LBD16            --------->ANAC58 --GLK1(2)          <---------At5g28300     <---------ANAC58--------->SPL7<-----------RAV1(2)   ----- --ARR14(2)        <-----------GT1 <--------P<----------DOF2<---------ATERF1(1)   --------->ANAC58   cggttaaaccacctctaaattttactgttacacgcgtgttggttttgcttttgctattgggggaccgcctggtgtatcaggtagaagcaaaacaaaacac  11359600                                                                                       --------->GLK1(1)                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                              --------->CCA1(2)                       *TSS                                                  <---------AGP1                      <---------ARR11(3)                                     --------->ARR11(3)   <--                      --------->ARR11(3)                                     <---------ARR11(3)  ----                      --------->GLK1(2)                                      --------->ARR14(2)  <---        <-----------GT1--------->RVE1(1)          --------->At4g35610        <---------ARR14(2)------    <----------DOF2  <---------GLK1(2) --------->ANAC55(2)                   --------->AGP1<---------ALFIN1 ---->ANAC46<---------MYB52(1)     ------>ZmHOX2a(1)        <-----------GT1 <---------CCA1(2)<-------   aaaactcttttctcgttacttcaaaatctcttctctccttcacgtttttctcatctccaatttcactctctcagtctcagatctgagagaactccaccgg  11359700                       --------->ANAC55(1)                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58                      <---------LBD16                     <---------DOF5.7(2)              --------->DEAR3(1)              <---------ALFIN1             --------->ATERF1(1)             --------->MYB46(3)             <---------ABI4(2)             --------->ERF1             <------NtERF2            <---------ATERF1(1)            --------->ABI4(1)            ------>NtERF2           --------->RRTF1(3)           --------->RRTF1(2)           --------->RAP2.6(2)           --------->DREB2C(2)           --------->RAP2.3(3)           --------->ANAC46         --------->YAB1           --------->RAP2.3(2)     <---------YAB1           --------->ATERF1(2)   --------->YAB1           <---------ATERF1(2)   <---------ICU4           --------->DEAR3(1)   <---------ATHB12          --------->ORA47(2)   ------>MYB46(1)          --------->RAP2.3(1)  ------>MYB83         <---------ATERF1(1)  --------->WOX13(1)    <-------TEIL    <---------REM1(2)  --------->YAB1  <---------GLK1(2)<-----------HVH21<---------ICU4 ----ZmHOX2a(2)    --------->DOF5.7(2)--------->At4g35610 ----->ARR14(2) <------NtERF2--------->MYB46(3)           <---------AtLEC2               <---------GLK1(1) ------ARR14(2)------>NtERF2<------NtERF2        --------->TOE2(3)                       --------->GLK1(1) --->LBD16--------->ERF1<-----------TGA1       <-----------ARR10               <---------------AGL15 --LBD16--------->DEAR3(1) ------>NtERF2       <---------ARR11(3)          --------->GLK1(1) --------   atcagattcatcgccgccaccgttcacggcaccaatcatcatcagaacaaatcttatttcgcatggtccaatttccgatttctcatcggagaaatcccta  11359800                                                       <---------ANAC58                         --------->MYB52(1)       <-----------RAV1(1)                         ------>MYB46(1)        <----------DOF2                                ------                         ------>MYB83  --------->DEAR3(1)                                   ---------                      --------->MYB46(3)--------->At4g35610       <---------ANAC58          <--------                    <-----------GT1  <---------At5g28300          <---------ANAC58       <---------At4g35610 ->TOE2(3)     --------->TOE2(3)    <-----------GT1    <---------ANAC58         <------ZmHOX2a(1)   attcaatcccgtttcatcgttataaccaatcggagaaatcaccgctcaaactttgttgctagggatttgagtgagtgagagaggaagatggagcagctaa  11359900                                                                            --------->WOX13(1)                                                                          <---------ATHB12                                                                      <---------WRKY38(1)                                                                    <-----------HVH21                                          <-----------HVH21        ----------->GT1                                         <------MYB46(1)         ------>ZmHOX2a(2)                ---                                         <------MYB83          --------->ARR14(2)              ------                                        --------->MYB59        <---------ARR14(2)           <------ZmHOX2a(2)                                     <---------ARR14(2)        <---------AGP1              <---------ARR11(3)                                     --------->ARR14(2)     <---------HSFB2a(2)          --------->ANAC58                                    <------ZmHOX2a(1)       --------->HSFB2a(2)          --------->ANAC58 ---->DOF2                          ====================================HOX2a_HOX2a  --------->ANAC58 >At4g35610               =================HOX2a_HOX2a     <-----------------AGL2    --------->ANAC58 -At4g35610               <------ZmHOX2a(2)                <-----------------AGL1  ---------->DOF2<--   agacaattggaagagagctagcgatgggatcacaaggaggatttggtcagtcgaaagagtttctcgatctggtcaaatcaatcggagaagcacgatctaa  11360000               --------->HSFB2a(1)               ------>ZmHOX2a(2)               <---------HSFB2a(1)              <------ZmHOX2a(2)             <---------ARR14(2)             --------->ARR14(2)         <---------------------WRI1                                           --------->At4g35610         <------ZmHOX2a(2)                                    --------->ARR11(3)        <---------ARR11(3)                                    <---------ARR11(3)        --------->ARR11(3)                                    <---------GLK1(2)        <---------ARR14(2)                                    --------->ARR14(2)         <-------TEIL        --------->ARR14(2)                                    <---------ARR14(2)     --------------->AtSPL8 ------>At4g35610                                             <-----------ARR10      <---------------AtSPL8 ---->DOF2------>ZmHOX2a(2)                         <---------YAB1         <------ZmHOX2a(1)   <----- -------At4g35610                                <---------YAB1<----------TaMYB80 ---------->DOF2----   agctgaagaagatcggatcgttctaagcgaggtcgatatactaaaacgaagattattagagccagatattcccaagaggaagatgaaagagtacattata  11360100  Previous    Next  AGI:  At1g31730.1    Description:  epsilon-adaptin, putative. similar to GAMMA-ADAPTIN 1, clathrin binding [Arabidopsis thaliana] (TAIR:AT1G23900.2); similar to GAMMA-ADAPTIN 1, clathrin binding [Arabidopsis thaliana] (TAIR:AT1G23900.1); similar to hypothetical protein OsJ_004438 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14613.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63748.1); similar to hypothetical protein OsI_004804 [Oryza sativa (indica cultivar-group)] (GB:EAY76957.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Adaptor protein complex AP-4, epsilon subunit (InterPro:IPR017109); contains InterPro Range:  from: 11359623    to: 11364269    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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