Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                         --------->ICU4                        <-----        <---------DAG2                          <------ZmHOX2a(1)                          <---------At4g35610        <----------DOF2                        --------->ICU4                           <---------MYB52(1)      --------->At4g35610                   ---------->DOF2                            <----------DOF2      <---------At4g35610                  <------ZmHOX2a(1)                        <---------ARR11(3) -------->ICU4         <--------P        <---------TOE2(3)          <----------DOF2 --------->ARR11(3) ---------AtSPL8      <-------GAMYB      <---------TOE1(3)  ----------->GT1        <------ZmHOX2a(1)- -------->AtSPL8     ----------->GT1<----------DOF2    --------->YAB1        ---------->DOF2   <-----   tactaatcagcttttttctaatggggttactaatacaacttttaaggaaaggattagtaatgatgtaaaacttttagtataaagaggacctttagctact  11330300                                                                                                    -            --------->TOE2(3)                                                                   >>>>>        --------->MYB46(3)                                                                     ------      ----------->RAV1(1)                                                                    <-------  --------->DAG2                                                                             <------- -----------AGL15                                                                            <------- ---------->AGL15     <----------DOF2                                                      ------->TEIL ------------AGL1  <---------ARR11(3)      <---------ARR11(3)                 --------->TOE1(3)------ --------->DOF2---------->DOF2  --------->TOE2(3)           <-----------GT1   --------->TOE2(3)------ ------------AGL3  --------->ARR11(3)      --------->ARR11(3)     ---------->DOF2     ---------->DOF2   taaaaaggcaacaatctcaaagttctttaactaatctcaaaatgaaatcttttaaacagatttaactacaaagaatgaaaccctaaaccaaagaacctaa  11330400   --------->CCA1(2)  --------->ARR11(3)  --------->ARR14(2)  <---------ARR14(2)  --------->ARR11(1) ---------->ARR10                     --------->ZAT18 >>>>MYB98                            --------->ZAT14 --->MYB52(1)                     <<<<<<<ZML2 --MYB59                       --------->HSFB2a(2) --MYB111(1)                   <---------HSFB2a(2)           --------->ARR11(3) --MYB46(2)         <------ZmHOX2a(2) <---------ZAT14        <---------ARR11(3) >MYB83<---------At4g35610  --------->ARR11(3)               <---------GLK1(2)                      - >MYB46(1)   <-------TEIL   <---------ARR11(3)      --------->TOE1(2)           ---------->DOF2     -   caaagatttggctgatacatagatcaacaagacctagaactacactaagagaaacatgagatagattttgaagaaacattgtaaaagaaatttgagcaca  11330500                                                                  --------->GLK1(2)                <-                                                                  <---------ARR14(2)               --                                                                  <-----------ARR10          --------                                                                  --------->ARR14(2)  ------->GAMYB--                              --------->GLK1(2)                  <---------GLK1(2)    <---------ALFIN1                              --------->ARR11(3)         <------ZmHOX2a(2)           --------->MYB46(3)                              <---------ARR11(3)        <---------ARR11(3)          -------->P ------                         <------ZmHOX2a(1)              --------->ARR11(3)      --------->ANAC46  <--                   <----------DOF2                   --------------->AGL15      --------->ANAC58 <--- -------->TOE1(3)<---------ZAT2                      <---------------AGL15      --------->ANAC58 <--- -------->TOE2(3)<---------At4g35610           --------------->AtSPL8     <----------DOF2  <-------TEIL   aacctcaatttctgaagcgagcttataggaaaaatctagagtagaagacgatgtactagatcaagtagaatctgagctttagaagcaaccacattcgtcc  11330600          <---------ANAC46         <---------TOE2(3)    --------->MYB52(1)  --------->At5g28300 --------ZAT14 ------->SPL7 ---------->SPL14         <---------YAB1      ===============HOX2a_HOX2a ------->ZAT14          <---------At4g35610   ------>ZmHOX2a(2)    >>>>>>>>>TBF1 --------->AtSPL3     <---------------------WRI1                >>>>>>>>>TBF1 -------SPL1(1)   --------->MYB52(1)       --------->ATHB12  >>>>>>>>>TBF1 ------SPL1(2)   --------->ICU4          <---------KAN4(2)>>>>>>>>>TBF1 ------SPL7 ----------->GT1         ---------->DOF2   <------ZmHOX2a(1)          <------ZmHOX2a(1)   gtacagtaactgaggtgtaataactgagatgattccaaaaaagaatgatcgatggaggaagaagaagaagaagaagtagtagaggaatgggtgagagaga  11330700                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                  ------------>CBF                                           --------                                 <<<<<<<<<<<<<<<<<LFY                                        <-------                         <---------YAB1                                                ------->GAMYB                        --------->ARR11(3)                                            --------->MYB46(3)                        <---------ARR11(3)       <---------AHL20(2)              <---------ICU4 <----                        <---------AHL20(1)   <---------AHL20(2)                  --------->YAB1<-----                    <------ZmHOX2a(1)  ----------->GT1                   ----------->GT1   <---------SPL7                   *TSS --------->AHL20(1)   --------->AHL20(2)      <---------ZAT6 --------->MYB52(1)   agtagagaacatttattgtggaggaatatttttgttgacaatggaaaataaatatttgtttttgaaaattagagatagtgaaataataacagccgtagga  11330800           <---------MYB52(1)         <---------MYB46(3)       --------->At4g35610 ---------DOF2 --->ZmHOX2a(2) ---ZmHOX2a(2) -----ARR14(2) ---->ARR14(2) -------ARR10                                                 --------->DAG2 ---->ARR11(3)                                         <------ZmHOX2a(2) ->SPL7<---------At4g35610      ---------->DOF2       --------->ARR11(3)                           <- --TOE1(2)<-----------HVH21   <---------ZAT6          <---------ARR11(3)       <---------AHL20(2) --- -----ARR11(3)      <---------ANAC58              ---------->DOF2  <-----------HVH21              <-- -ZmHOX2a(1)        <---------ANAC58     --------->ATHB12    ---------->DOF2  --------->AHL20(2) <---   tctttgttgagctgttagacggtcgtgatatagtgaaagggtttgatttgacaaaagatcgaataaagtggtcagatttataaaatttcaaaaacctatt  11330900              <---------At4g35610              --------->At4g35610             --------->DEAR3(1)             --------->RAP2.3(2)             <---------DEAR3(1)            --------->ATERF1(1)            --------->RAP2.3(1)            <------NtERF2           <---------RAP2.3(1)                                                                   ----   --------->ARR14(2)                             <---------ARR14(2)                      <-------TEIL   <---------ARR14(2)                             --------->ARR14(2)                    --------->ARR14(2) --------->LBD16                                 ------>MYB46(1)                        --------->ARR11(3) --------LBD16------>NtERF2                      ------>MYB83                           <---------ARR14(2) ------>MYB52(1)                               <---------MYB59    ---------->DOF2    <---------TOE2(3) -------At5g28300                             <-----------------AGL2                ---------->DOF2 --------GT1--------->DEAR4(2)    ------->TEIL----------------->AGL2      <-----------GT1--------->CCA1(2)   taccggatactagcgccgctggtgagagacaatatgtatatagacaagaccaaatttggattatatcaaaaagattaaaccatgtttaaagatacactat  11331000                                                                                   --------->ANAC46                                          --------->YAB1                          ------>MYB46(1)        --------->AHL20(2)                -------->HAHB4                          ------>MYB83        --------->YAB1    <---------------AGL15                                  <---------ALFIN1     --------->YAB1<-----------ARR10     <---------YAB1                         --------->MYB46(3)  ----------->GT1 <---------CCA1(2)    --------->YAB1                           <---------MYB55(2) ----->YAB1<---------ICU4 --------------->AGL15                            --------->YAB1  <---------LBD16   catgtagtaataaaaatttcaaatcttactcaaataagaaataataatacaacgatgtcaaaactggaaaaccagaatcatacccacccagtttcagggt  11331100                 --------->YAB1               ------->TEIL             --------->MYB46(3)            <---------YAB1             ------>MYB46(1)     --------->ZAT2                  <---------MYB46(2)     --------->At4g35610    <----------DOF2     <---------At4g35610  ------>ZmHOX2a(1)      ------->TEIL                  <------ZmHOX2a(1)     <---------ZAT2 <---------ICU4   <---------MYB59           >>>>>>>>>>>>>>>>>LFY<-----------HVH21    <-----------RAV1(1) <---------ZAT18------>MYB83--------->YAB1           <---------LBD16       <--   ttatctctgctgctatgaatcatcagtcctctttcaataccaaacaccatgaatcatcagtcttcttccattggtacttcaggaatgtcaaacctgtctt  11331200  Previous    Next  AGI:  At1g31650.1    Description:  ATROPGEF14/ROPGEF14 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF7/ROPGEF7 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT5G02010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76404.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 11326282    to: 11330719    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31660.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93690.1); contains InterPro domain Bystin (InterPro:IPR007955) Range:  from: 11330937    to: 11333521    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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