Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <----------DOF2                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                              <---------ZAT14                                                                           ------>MYB46(1)                                                                           ------>MYB83           <--                                            <------MYB46(1)              --------->DREB2C(2)      ---                                            <------MYB83                 --------->DEAR3(1)     -----                                         <---------ANAC46                --------->MYB46(3)    <-----                                     <---------ZAT2                      <---------MYB55(2)    <-----                                     <---------At4g35610                 ------->GAMYB===============                                     --------->At4g35610                 ============================    --------->ZAT14            --------->ZAT6                           --------->DEAR3(2)    ------- -----ALFIN1          <---------At4g35610<---------ANAC58              xxxxxxxxxxxxxxxx>smallRNA(i) >ZmHOX2a(1)          --------->At4g35610<---------ANAC58       <---------At4g35610  <---------ANAC46   accctctgcaatctcacctaagtcagcatcaaaacactaagctgcttggtatagctccaaaatttcagcattccaccgactgaagttgctttcacagtca  11308700           <-------PIF5          --------->ANAC58          <---------TGA1a          --------->O2          --------->ANAC58          --------->ANAC46          --------->bZIP60(2)          <---------O2          --------->TGA1a       <---------ZAT18       --------->ZAT18       <---------WRKY38(1)    <---------ATHB12 -------MYB55(2)     <---------YAB1 ------>MYB46(3)   <---------ICU4<---------At4g35610                              <---------ALFIN1 ---->WOX13(1)     --------->YAB1--------->At4g35610                              --------->AtMYB61 ----WRKY38(1)    <---------ATHB12                                               --------->ANAC46 ----WRKY12------->PIF5      ------>MYB46(1)                                   --------->ANAC46 ===================bZIP_DOF ------>MYB83                                     --------->MYB46(3) ===================MYC_MYB --------->WOX13(1) --------->ANAC58          <---------GLK1(2)    ------- -->WRKY18(1)     --------->ICU4 --------->ZAT2--------->ANAC58          <---------ARR11(3)------>NtERF2   accactgagtccacgtccccatgatgataccaatcagctctcaacttgtaagcctcatccatccccttcttacaagattatccaccacatcgctgcctga  11308800                                                                        ----------->GT1                                                                    --------->TGA1a                                                                    <---------O2                                                                    =================================                                                                    --------->O2             --------->ANAC58                                     ----------->RAV1(1)             --------->ANAC58                                <---------At4g35610        --------->ZAT6                                       --------->At4g35610        --------->ANAC46                       <---------ATHB12   <---------ALFIN1      <---------ALFIN1                 --------->YAB1        <---------ZAT2                         < <---------ANAC58        <---------AtLEC2    --------->WOX13(1)--------->RAP2.6(2)                  - <---------ANAC58    <----------DOF2  <---------YAB1         --------->ZAT2                  <------- ---->HVH21  --------->ANAC46       --------->YAB1    ------>ZmHOX2a(1) <---------MYB46(3)  <--------   ctgtcgttccacactacgacagtctttgcagggacatattatcatgtcaatgactcctaatgcagcagccacatcggttacaaatttctgagcacctttc  11308900                                                                    --------->TOE1(3)                                                                    --------->TOE2(3)                                                                    <---------MYB59                                                                 ------>MYB83                                                                 ------>MYB46(1)            <---------At4g35610                                --------->AtMYB61         ==================================HOX2a_HOX2a         ------->GAMYB         <------ZmHOX2a(2)                                     <---------MYB59        <---------ARR14(2)                                    --------->MYB46(3)     --------->LBD16                                         --------->ANAC58    <---------LBD16                 <------ZmHOX2a(1)    --------->ANAC46 --------->ARR14(2)   <---------AHL20(2)                 --------->ANAC58                   <-------- <---------ARR14(2)   --------->AHL20(2)                 --------->ANAC58                   --------- ===bZIP_DOF--------->At4g35610    ----------->GT1     ---------->DOF2                     <---------AHL20(2) ---------CCA1(2)    --------->AHL20(2)    --------->AHL20(2)--------->ANAC58              --------->AHL20(2) -------->GLK1(1)    <---------ATHB12     --------->AHL20(2) -------->P            -------->P   <---- ---DOF2--------->ARR14(2)        ----------->GT1 <---------------AGL15           --------->MYB52(1)< -DAG2 <------ZmHOX2a(1)      <---------ZAT14     --------------->AGL15         <---------MYB52(2)  -   tcatatccaggatcagctcttcaataaatgagtaaacaggaaaaataaaaaacctcttaaagcaaccaaacctaaacagaaaactaacccatattaatta  11309000                                                               --------->TOE2(3)                                                   --------->TOE2(3)    -------->P                                     --------->TOE1(3)                          ------- -ICU4                                --------->AHL20(2) <---------AHL20(2)                ---------- >YAB1                              --------->TOE2(3)    --------->YAB1                 --------->ANAC58 -------GT1       ------->TEIL   ----------->RAV1(1)     --------->AHL20(2)             --------->ANAC46 ---------At4g35610       <---------ANAC58        --------->At4g35610                   --------->ANAC58 -------->At4g35610       <---------ANAC58       <---------TOE1(3)                  --------->TOE1(3)   tctgcttacctgcatagacgaacccatgccttgtccaacattatatgttctaagcttaattaaaacctttgtaagagcaattcaaaccataagcaacatt  11309100                                                ------------>CBF<---------CCA1(2)                                             *TSS          ------>MYB83 -->TOE2(3) --------->At5g28300        <---------ZAT18     ------>MYB46(1)              <---------TOE2(3) ->RAV1(1) ----------->GT1             --------->ZAT18<-----------GT1        <-------TEIL       -----   aaactattgaagacagtaactcaaatagcatcacagacaagtgctcttggaccaatataccaacttatctcttatcaagttcatcaaattaagaaataaa  11309200                                                                       --------->ZAT6                                                 <-------MYC3          <-----------GT1                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 <-----------GT1           <-----             <---------ETT(2)                    ------->MYC3  ------>MYB46(1)                ------>MYB83        ------------>CBF                 ---------->DOF2       ------>MYB83                   ------>MYB46(1)       --------->YAB1               <---------AHL20(2)        ----------->RAV1(1)      --------->AHL20(2) ------->CBF --------->ETT(2)      --------->AHL20(2)     <------ZmHOX2a(1)           <---------ATHB12   caatggcaaacacaatcgacagtagctctatctcagattaaatcaaagacacatgttttaggaccaacaaattacactatctcagccaataaaaccaatc  11309300      --------->YAB1   --------->WOX13(1)                                                                            ----   --------->YAB1                                                                               -----  --------->MYB46(3)              ---------->DOF2                 --------->YAB1      ---------->DOF2 ----ATHB12          ---------->DOF2                    <-------TEIL     ---------->DOF2        <----   gacaacaatcacagcaacttaagtaaagaacagaacaaaagaatcacagcaacttaagttcatacaactcataagtaaagaacagaacaaaagaatcaca  11309400                                <---------ANAC46                              <---------ANAC46                              <---------ANAC58                              <---------TGA1a                              <---------O2                                       <---------ALFIN1                              =============================bZIP_DOF             -------->P                            <-----------HVH21                              --------->YAB1                         ----------->RAV1(2)                              <---------ATHB12                        -------->P                                        --------->MYB46(3)                        ================MYC_MYB                         --------->WOX13(1)                     <---------MYB52(2)     >>>>>>>>>TBF1     ------>ZmHOX2a(1) ------>MYB46(1) ----->AtLEC2     <----------ID1----------->GT1           <---------ARR14(2)    ------>MYB83 -------- -->MYC3      ==========================bZIP_DOF          --------->ARR14(2)  --------->AtMYB61 ----- ---MYC3      ---------->DOF2 <---------ANAC58  ---------->DOF2--------->ANAC46----------->RAV1(1) --   tgcacaaaatttagttgaaagggactaacctgtcgtgtgaatagaagaagaaaagtttcagttcctcgacattgcaatcaccaacacttgataaaaaacg  11309500  --------->YAB1                              -------->P  <---------ICU4              <---------ARR11(3) ->MYB52(1) <---------REM1(1) --------->ARR11(3)--------->TOE2(3) ---->TOE2(3)        --------->DAG2      --------->WOX13(1)         ---------->DOF2 ------->YAB1       ---------->DOF2    <---------ATHB12   --------->AtLEC2                       <---   ataatcagtataagttgaagcaaaaagtttaagaactctaaatcaatctaccctaatttcattcaaatcacaaagccctaaatattgaaaacaaatcgat  11309600  Previous    Next  AGI:  At1g31570.1    Description:  transposable element gene. CACTA-like transposase family (Tnp2/En/Spm), has a 0. P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative; 12762-16371 (Arabidopsis thaliana) (CACTA-element) Range:  from: 11302763    to: 11309145    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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