Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------TOE2(3)   ---------->DOF2 -------->ANAC58 -------->ANAC58 -------->ANAC46 -------->AtLEC2 ---->NtERF2 -------ALFIN1 ------>DEAR3(1) ---NtERF2 ----->ATERF1(1) -----RAP2.3(1)                              <------MYB46(1) ->NtERF2                        --------->GLK1(2) -----ATERF1(1)                 <---------GLK1(2) ----DEAR3(1)           --------->ARR14(2)   <------MYB83 --->DEAR3(1)           ------->TEIL        --------->MYB59 --->ANAC46             <---------ARR14(2)  --------->MYB46(2) --->PCF2              <---------CCA1(2)<---------MYB46(3)    --------->ZAT14 -->RAP2.3(1)      <------MYB83 <---------ARR14(2)            <---------ZAT14 --ATERF1(1)       <------MYB46(1)     <--------P--------->ANAC55(2) -DEAR3(1)         <---------ANAC46 <---------YAB1       ------->TEIL                     <------ZmHOX2a(1) >ANAC46    --------->YAB1   <---------TOE1(2)   <---------ANAC55(2)       --------->AHL20(2)    <---   ccacgcaaaggttttcatatttggtgtatccttggattctggttgtttggtatgtaatgaactctgcactgtttaaaataaacaagaaggaaggagagac  11282000                    <---------AHL20(2)                                                             <-         <----------DOF2                                                                          <--   --------->MYB59 --------->YAB1                                                                 <--   --------->MYB46(2)   ----------->GT1                                             <---------ANAC58 <---------MYB52(1)--------->AHL20(2)                                    <-----------GT1          <-- <<<<<<<<<MYB98    <---------AHL20(2)                                  <---------AHL20(2) ---------->DOF2 -------DOF2       <---------AHL20(1)                        <---------CCA1(2)      <---------ANAC58   tttgttaggcactttagacaataaaattgtaaactataaaactgaaattgtattcaacgtcttaaatctctatttatacaatttgggcttgaaaaagatt  11282100                                         <---------YAB1    --------->YAB1                      --------->ARR14(2)   <-------TEIL                    --------->LBD16                                           -------- --------ZAT18                --------->GLK1(1)      --------------------->WRI1              <------- -------ANAC58              <------ZmHOX2a(1)   --------->At4g35610                          ------>ZmHOX2a(1) -------ANAC46            --------->YAB1<---------ARR14(2)      ----------->GT1             <-------- -------ANAC58<----------DOF2 <---------GLK1(1) <---------At4g35610                         <--------   gcgcattcatagccttctttattttcaataggaattccagagtatccttgagcttccatgtttctatcgaaaaaactatggtactcgtctacttcctgaa  11282200       <---------WOX13(1)                                     --------->TGA1a     --------->ATHB12                                         --------->ANAC58   <---------WOX13(1)                                         --------->ANAC58              <-------- ->LBD16                                               --------->ALFIN1                     --------- --------AGL15  <---------AHL20(1)                     <-----------RAV1(1)                --------->REM1(2) ---------AGL2  --------->AHL20(1)             ------>ZmHOX2a(1)             <---------At4g35610 ---- ---------AGL3 <---------AHL20(2)          <---------ARR11(3) <---------TGA1a--------->At4g35610 <---   aatggattgattgatatatatattagaattcatattagcatacaaaatcctatttatgtgtggcacgagagaatgagagagctaaacaaacttgtagaca  11282300                                                                                           <------ZmHOX2a(1)                                                                                       --------->LBD16                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                     <---------LBD16       --------->At4g35610                    <---------HSFB2a(1)               --------->AHL20(2)       <---------At4g35610                    --------->HSFB2a(1)       --------->YAB1<---------ANAC58 -ETT(2)                         <---------GLK1(2)        --------->AtMYB61   --------->TOE2(3) >ETT(2)                         --------->ARR14(2)    <---------ALFIN1<---------AHL20(2)  --------->ATERF1(1) ----->At4g35610         <---------AHL20(2)  <---------TOE1(2)         --------->AHL20(2) <---------ATERF1(1) ------At4g35610   <----------DOF2      --------------------->WRI1    --------->AHL20(2) --------->ALFIN1   gatgaaatcagcttcaaaattctttatattatcaagaatcgccttcgaacgtttctcccacctataccaaaaattaataacataaattgcggaggagcct  11282400                                                --------->At4g35610                                                --------->LBD16                                               --------->ANAC46                                            <---------SPL7                                           --------->DEAR3(1)                                         ------>NtERF2                                        <---------bZIP60(1)                                        --------->bZIP60(1)                                        --------->ANAC58                                        --------->ANAC58                --------------->AGL15                                        --------->ANAC46                <---------------AGL15                                      ------>NtERF2                    <-----------------AGL2               <------ZmHOX2a(1)      <---------ATERF1(1)       <---------ARR11(3)         <---------LBD16             --------->DEAR3(1)       --------->ANAC58  --------->ARR14(2)            --------->CCA1(2)  --------->ZAT14     <---------YAB1 <------ZmHOX2a(1)      <-------TEIL <---------DEAR3(1)       --------->ANAC58   acaggatagactctggaggagagacatacatgagagacgacgacgccatccgctacacaaacacaagacccttactattaagagcatgtccatcgatatg  11282500                                                 ------------>CBF                                               --------->ANAC58                                               --------->ANAC46                                               --------->ANAC58                                        --------->YAB1                                       <---------YAB1                                           -----                                  --------->ARR11(3)                                     <---------REM1(1)                                  <---------ARR11(3)                 <-----------GT1   <-------GAMYB          ---------->DOF2         <---------GLK1(2)               <---------KAN4(2)   --------->ALFIN1         <---------AHL20(2)      <---------RVE1(1)         ----------->GT1          <---------ANAC58       ----------->TBP       --------->MYB52(1)<----------ID1    --------->YAB1     <---------ANAC58   tcaaaacatatataaagtatacttgtataactaagagatttttgataatacgacaatgagggagtaagaataaactacatgagctagggtgttgtaagag  11282600                                                                               --------->AHL20(2)                                                                               --------->ATHB12                                                                               <---------AHL20(2)                                                                               --------->ATHB51                                                                               <---------ICU4                                                                              <---------YAB1                                                                              --------->ICU4                                                                            --------->YAB1                                                                           <---------YAB1       --------->ARR14(2)              --------->ICU4                      <---------AHL20(2)   <----       <---------ARR14(2)           ------------>CBF                   --------->YAB1          <-----      <---------GLK1(1)           --------->ANAC58                    <---------YAB1       ----------   --------->ANAC58               --------->ANAC58                  --------->YAB1      <------------   --------->ANAC58               --------->ANAC46     <-----------HVH21   --------->AHL20(2) ------- ---->CCA1(2)                   ---------->DOF2   ----------->TBP   <-----------GT1     <------------   acgactcgaaatctgcctgcatatttcaacacaaacaagccaatattagcctatatatgtcatagaatatttatcatataattatttgatatagtaccgt  11282700                                      <---------DAG2                                      <----------DOF2                                    ------>MYB46(1) -----MYB52(1)                      ------>MYB83                                     <----------DOF2 --GAMYB                           <---------ALFIN1                                 <---------DAG2 -->MYB.PH3(1)         ------------>CBF  <---------LBD16                        <-------MYC2 ---AtSPL8<---------ANAC58        ------->GAMYB     <---------TOE1(2)           <-------MYC3 ---->GT1 <---------ANAC58      -------->P    --------->GLK1(1)                 ------->MYC3 ---AtSPL3<---------ANAC46  <---------ARR11(3)<---------GLK1(1)                 ------->MYC2   tactacgatgaggcttgtgactagggacaatatcaacccacttttcggatttctcatgtttctgacataaacaatgcttccacatgccttttgtgagaaa  11282800                                                          --------->ARR11(3)            --------->AHL20(2)            ---------->DOF2                               <---------ARR11(3)            <---------AHL20(2)         ----------->GT1                                 <---------CCA1(2)            --------->AHL20(2)   ------>ZmHOX2a(2)         <---------AHL20(2)      <---------ANAC46                <---------ARR11(3)  --------->At4g35610      --------->ANAC58          <---------ANAC58          --------->YAB1  <---------At4g35610      --------->ANAC58          <---------ANAC58       --------->WOX13(1)   <--- --------->ARR14(2)    ----------->GT1      ----------->GT1              ------->TEIL<---------AHL20(1) <---------AGP1 <---------ARR11(3)         --------->ARR11(3)    --------->ARR11(3)  --------->ARR11(3) <---------ARR14(2)    --------->YAB1      <---------ARR11(3)   <---------CCA1(2)  --------->GLK1(2)-   ttggatctgaattgtaaagatagtatcgtaagtaattgaagagaagatgttattttcgtatatcttatatctatgtatcaatgagaatatatatatacag  11282900  Previous    Next  AGI:  At1g31530.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G31500.2); similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G31500.1); similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G31500.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO63772.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 11281169    to: 11282449    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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