Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->GLK1(2)                <---------GLK1(2)              <---------YAB1                                                          <-----------RAV1(1)              <---------TOE1(3)                                                  <----------DOF2              <---------TOE2(3)                                               <---------ARR11(3)       <---------AHL20(2)                                                     --------->ARR11(3)      --------->AHL20(2)                                                      <-----------GT1      <---------AHL20(2)             --------->ANAC58                        --------->YAB1     --------->YAB1        --------->AHL20(2)                             --------->YAB1           <- ----->DOF2--------->AHL20(2)        --------->ANAC58                     <---------ICU4       <----- ---YAB1   <---------AHL20(2)    <---------ANAC55(2) <----------DOF2     <---------ATHB12<---------MYB46(3)   aagacaattttaatttaagattctattcatataatatgtaagcaaaaactggtgtctttctctcaataagttccactaattatcttttctgtggtttctt  11262900                                                                                                    -                                                                                                    <                                      <---------TOE1(1)                                         <----                                      <---------TOE2(1)                                      <-------                             <---------ARR14(2)                                              <-------                             <---------ARR14(3)                                              <-------                             <---------GLK1(2)                                           <---------MYB46(3)                             --------->ARR14(3)                                          <------MYB83                             --------->ARR14(2)                          ----------->GT1 <------MYB46(1)       <---------GLK1(2)<------ZmHOX2a(2)   <---------YAB1               --------->LBD16<---------AtMYB61       --------->ARR14(2)    <---------ARR11(3)                         <---------DEAR3(1)  <-------TEIL       <---------ARR14(2)    --------->ARR11(3)              <---------ANAC58           --------->MYB59 --------ZAT6  <-----------GT1<------ZmHOX2a(2)              <---------ANAC58   <-----------GT1 <---- -----DOF2   <---------WOX13(1)------>ZmHOX2a(2) <---------TOE2(3)   --------->ANAC46 <---------MYB52(1)   tgtgttacagatttgatttacaatggatcaagatccttgtacgatgatgttaatgaaaccttgtcttgttcaagccggtgataaaccggtttggttcgta  11263000                             --------->ARR14(2)                             <---------ARR14(2)                            <------ZmHOX2a(1)                         ------>NtERF2                         --------->LBD16    ----------->HVH21   --------->DEAR3(1) -------->ZAT14        <------NtERF2--------->ANAC58 ---------ZAT14       ------>NtERF2 --------->ANAC46 -----TOE1(2)        <---------DEAR3(1) --ANAC58            --------->DEAR3(1) --ANAC58           --------->ATERF1(1)   ------->GAMYB --ANAC46          <---------ATERF1(1)  -------->P -----TOE2(2)     ----------->HVH21 --------->ANAC58                 --------->WOX13(1) --------->ATHB12   tgtacagtgacagacttgagacgacgccgaggatagacaagcaaccccaaaacacaaacgttttgaagtagcaatctcttccgatgcaaacgattgagtc  11263100                            <---------MYB52(1)                           <-------GAMYB                                       <------MYB46(1)                          <---------ANAC46                <------------MYB.PH3(1)  <---------YAB1                          <---------ANAC58               <---------At5g28300   <------MYB83                      <---------ANAC58           <------NtERF2              <---------MYB52(1)                      <---------ANAC58        --------->ATERF1(1)     --------->ZAT18                 <---------LBD16   <---------ANAC46     <-----------GT1 <---------At4g35610         <---------ZAT6   <---------ANAC58    <------NtERF2------->GAMYB--------->At4g35610       <--   agacactattggtgttatatcggggcttgcgttggcttcgtaaatggaggcagcgatgtaaccgtataagagtgagccgattggtatgtttgtgatgaga  11263200                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                             <---------ANAC46                                                            <------NtERF2                                                          <---------DEAR3(1)                --------->ANAC58                         <---------At4g35610                --------->ANAC46                         --------->ZAT2                --------->ANAC58                         --------->ATERF1(1)               ------>MYB83                              <---------ZAT2               ------>MYB46(1)                           --------->At4g35610             --------->TOE2(2)                          <---------ATERF1(1)             --------->TOE1(2)                          <---------RAP2.3(1)                         <             --------->AtMYB61                          ------>NtERF2                               <     <-------GAMYB                  <------ZmHOX2a(2)  <---------RAP2.6(2)                          <    <---------MYB46(3)            <---------GLK1(1)    <---------DEAR3(1)--------->TOE1(3)          <   <---------TOE2(3)         ---------->DOF2           <---------RAP2.3(2)                      <---- <---------ANAC46       <---------ANAC58              <---------At4g35610--------->TOE2(3)     <----- ---------RAV1(1)       <---------ANAC58              <---------LBD16   ----------->RAV1(2)   <------   atgttgtggttaacacctacgctattgggtccaaagagatcagatgttatggagactgcggctgcgaatatgaaacctgaactcagaccgattaatgcgg  11263300      <---------ZAT14                                                                       <-------- ---------ANAC58            <---------YAB1                                                  <-------- ---------ANAC46          <------ZmHOX2a(1)                                               --------->ARR14(2) ---------RAP2.6(2)   <---------ANAC46         ---------->DOF2<------MYB46(1)        ------>MYB46(1) ---------ANAC58  <-------GAMYB              *TSS   --------->ATHB12                 ------>MYB83 ---GAMYB        --------->MYB52(2)        ---------->DOF2    <------MYB83<------------CBF<---------ARR14(2) ----MYB46(3)    <---------MYB46(3)   ----------->GT1<------------CBF  <---------ZAT18   <---------MYB52(1) ---RAP2.6(2)  <---------MYB52(1)   <---------MYB52(1)      <--------P --------->ZAT18  <---------DEAR3(2)   ttgcggtctgcaatgctgtttgttgtgaggatgataccgctagtaaaaagaaagcgattggagttggtaagagtgcgattgcaaaccagccggttcttgt  11263400                   ------------>CBF                  --------->CCA1(2)                  <------ZmHOX2a(2)                 <---------ARR14(2)                 <---------ARR11(3)           ------>ZmHOX2a(1)     <---------ARR11(3)  <---------YAB1 --------->ANAC46--------->ARR11(3)                                        --------->TOE2(3) --------->ANAC58--------->ARR14(2)           <-----------GT1         ------>ZmHOX2a(1)   <---------ANAC58 --------->ANAC58--------->AGP1      --------->GLK1(2)               --------->TOE2(3)    <---------ANAC46 -ANAC58   ==============HOX2a_HOX2a --------->ARR14(2)              --------->TOE1(3)    <---------ANAC58 -ANAC58 ----------->RAV1(2)         <---------ARR14(2)        --------->ARR11(3)   ------->TEIL   --   taaacgaaatctcctgcaagatccaatattcttgatgagaatatgttatttcaatttcacattaagacattccttaatctaaaatgaaacttacttgtgc  11263500               <------NtERF2            <------NtERF2            <---------At4g35610           ----------->RAV1(1)          <---------RAP2.6(2)         --------->SPL7        --------->ALFIN1                                         <---------ANAC46     <-----------RAV1(1)                                       <---------ZAT14  --------->GLK1(2)                                            <---------ZAT18  <---------ARR14(2)                <------ZmHOX2a(1)          --------->ZAT14  --------->ARR11(3)      --------->MYB52(1)                   --------->ZAT18   ---------->DOF2 ------->AHL20(2)    --------->WOX13(1)              ----------->GT1         ---------->ID1 ---------   ataaaatctggtgcggcagagagcaatctaccgaagaaggagaatgaagagtagattgtgactagtgtagtagagttttgtcccaaagactgagcaatct  11263600                                              --------->ANAC55(2)                                              --------->ANAC55(1)                                              <---------ANAC55(2)                                              --------->ANAC58                                              --------->ANAC46                                              --------->ANAC58                                    --------->AtMYB61                                    <---------ALFIN1                                              ---                                    ----------->RAV1(1)                                          ----      <-----------RAV1(1)          --------->MYB46(3)                                            <--- >WOX13(1)                        ------>NtERF2       ----------->GT1                    --------->YAB1   gtcccaaattgttgctgtaaacaaggccaattgtgccaccacagaaatacgcaatgtagtataaccaaaactccaatctacttatgagcaatcgaaacga  11263700                                                                     --------->MYB52(1)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                 --------->HSFB2a(2)        --------->DEAR3(1)        --------->At4g35610      --------->ARR14(2) <-------TEIL                     <---------At4g35610      <---------ARR14(2) ------>KAN4(1)               --------->TOE1(3)          --------->LBD16 --->TEIL                     --------->TOE2(3)        <---------LBD16    ------->TEIL      <-------- ------KAN4(2) <---------ALFIN1------>ZmHOX2a(1) <-------TEIL    <---------HSFB2a(2)        ---------   atgttcatcaccgagcctcactgtgttcccttccttagcagtccccatatgttcatacccggttttgctggaaacggacgttttttggttcttgagctca  11263800  Previous    Next  AGI:  At1g31460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69041.1) Range:  from: 11261522    to: 11263345    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31470.1    Description:  NFD4 (NUCLEAR FUSION DEFECTIVE 4). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45275.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63775.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPro domain Nodulin-like (InterPro:IPR010658) Range:  from: 11262899    to: 11264944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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