Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <------MYB46(1)                                                                                     <------MYB83                                                                                    --------->MYB111(1)                                                                                    <---------AtMYB61                                                                              <---------MYB52(1)    --------->At4g35610                                                  --------->GLK1(2)    -------    <---------At4g35610                                                 --------->ARR11(3)    <------ ------ARR14(2)     ---------->ID1                                      <---------GLK1(2)    -------- ----->ARR14(2)    <-----------HVH21            <---------ANAC58        --------->ARR14(2)   <------- >GAMYB        <---------GLK1(2) <------------------SPL14               <---------ARR14(2)  <-------- -----MYB.PH3(1) <-------TEIL    <---------ANAC46 ----------->HVH21     <---------ARR11(3)  --------- --GT1    <----------DOF2   ------>ZmHOX2a(1)   <---------ANAC58      ----------->ARR10--------->ALFIN1   atttgcagatgtctttagattcgtcgcatccttcttcgtgttcggacaaggcttgacaggtttttgaatcgcaagattctgttttgtaggtggaagattt  11260800                                                                            --------->LBD16                                                                           <---------ANAC58    <---------HSFB2a(2)                                                    <---------ANAC58    --------->HSFB2a(2)                                                    --------->ANAC55(2) -->GLK1(1)                                                        <---------ZAT18 ---GLK1(1)                                                       <-----------HVH21 ->ARR11(3)  --------->ZAT14                 <---------ANAC58    <------MYB46(1)         <---------ANAC46 --ARR11(3)  <---------ZAT18                 <---------ANAC46    <------MYB83 <-----------HVH21 -HSFB2a(1)  <---------ZAT14            <---------bZIP60(2)     --------->MYB59   --------->At4g35610 >HSFB2a(1)  --------->ZAT18 <-----------GT1 <---------ANAC58   --------->MYB46(2)<---------At4g35610   cttcttgtcgaagagtggactgttttgtttgtaacattgttgacatggcttacattggacccaagttaggtcacttcccgtgtcagcaatggcgaaaact  11260900                                                 <---------TOE2(3)                                          <------NtERF2                                         ------>NtERF2                                        --------->ATERF1(2)                                        --------->RAP2.3(3)                                        --------->ANAC46                                        --------->RAP2.3(2)                                        --------->RRTF1(2)                                        --------->RAP2.6(2)                                        --------->DREB2C(2)                                        --------->RRTF1(3)                    <-------GAMYB                                        --------->DEAR3(1)                    <---------ANAC58                                        <---------ATERF1(2)                   <---------ANAC58                                       --------->ERF1                <------ZmHOX2a(2)                                       --------->ORA47(2)           <---------ARR14(2)                                       --------->ATERF1(1)          --------->ARR14(2)         <---------SPL7                --------->RAP2.3(1)         <---------GLK1(1)        <---------ANAC58              <---------ATERF1(1)    --------->ARR14(2)        <---------ANAC58              <---------RAP2.3(1)    <---------ARR14(2)       <---------------AtSPL3        --------->ANAC46      --------->LBD16   <---------MYB46(3)     --------->ALFIN1             <---------ARR14(2)     <---------LBD16    <---------AtMYB61    ----  <---------DEAR3(1)              --------->ARR14(2)   <-----------GT1------>ZmHOX2a(2)   <---------ANAC46   ttcgacggtggagtaccgattgagatggacatgaagtattcgccgccatttgagattaaaccggattggagatcggttttggttgtgaaacggcgagaac  11261000                                                      <---------MYB46(3)                                             <---------ANAC46                                      <-                                            --------->ALFIN1                                     <---             <------ZmHOX2a(1)             <---------ZAT14                                    -------        ------>ZmHOX2a(2)                  --------->ZAT14   --------->ALFIN1       <---------MYB46(3)     --------->ATHB12            <---------WRKY12     <---------REM1(1)           --------->At5g28300   <---------WOX13(1)<---------ANAC46     --------->ALFIN1 <---------ANAC46    <---------At5g28300<-- ----->TOE1(2)---------->DOF2  <-----------HVH21    <-------GAMYB       <------ZmHOX2a(1) --------->At4g35610   gtgagattgatcggaggaaagcagcgttgagacggtcagagacagtgtggtgagggttgtagagtggagaatgaggagagtcacggtggattagctcgac  11261100                                                                                    --------------->AGL15                                                                                    <---------------AGL15                                                                                   <-----------------AGL3                                                                                   ----------------->AG                                                                                   ----------------->AGL3                                                                                   <-----------------AG                                                                                   ----------------->AGL1                <---------At4g35610                                                <-----------------AGL1             <---------MYB52(1)                                                    <-----------------AGL2            <-----------HVH21                                                      ----------------->AGL2    --------->ARR11(3)                    --------->At4g35610                  <-------GAMYB    <---------ARR11(3)                    <---------At4g35610                  <---------ANAC58 --------MYB52(1)             --------->ANAC58                                 <---------ANAC58     < ------MYB46(3) --------->At4g35610      --------->GLK1(2)                    <---------MYB46(3)   -- ----->AtMYB77 --------->MYB52(2)---------->DOF2                      ---------->DOF2 --------->ICU4< -----GAMYB <-------GAMYB     --------->ANAC58              <---------ZAT14  <---------AtMYB61 ------   ggttaagttctctcggttagctgaagaattggaagcaaagaagaagctgatggctaagagagaacagtagagaaaagttttggttgccatttttggatga  11261200  <--------P <---------ANAC46 ------MYB83 <---------REM1(1)                      ----------->GT1                          -------- ------->MYB59                                 <---------ZAT14                               -------- ------MYB46(1)                                --------->ZAT18                        <------------CBF --->ATHB12<---------ANAC46             ---------->DOF2              ---------->DOF2--------->ICU4   tttggtaagtttgtggtgtagacttgtagtgagtctgtgagtgaaagagtgcaagggtttataaacagcatgaaagggaacttgaaaagattgaaacggc  11261300                     --------->GLK1(2)                                                             <-             --------->ALFIN1                                                                     ---           ========================================bZIP_DOF                                       <--           <---------bZIP60(2)                                                                   <---           <---------O2                                                                     <--------           --------->O2                                    <---------At4g35610             --------->ATHB12           --------->TGA1a        <---------GLK1(2)        --------->At4g35610            <---------YAB1           <---------TGA1a     <---------WOX13(1)     <---------YAB1                      --------->ICU4           <---------ANAC46<---------WOX13(1)         <---------TOE2(3)                <---------YAB1        ----------->HVH21 <------------CBF          <---------ICU4 <------------CBF    --------->ICU4 ->ANAC58 <------NtERF2  --------->ATHB12 --------->AHL20(2)     --------->ARR11(3)  <---------At4g35610 ->ANAC58------>NtERF2  <---------YAB1  <----------DOF2--------->ZAT6          <---------ANAC46------   aacgagtttggcgacgtggtgagaatgtgattgatagattagctttaaatttcattaagactgctaagttattgagaggtttagtggagatgattattga  11261400                                                                                  --------->AHL20(2)      ---------->DOF2                                                             <---------AHL20(2) <---------YAB1                                                                  <---------YAB1 <---------------AGL15                                                   --------->TOE2(3) --------AHL20(2)                                              ---------->DOF2 --------->YAB1 ------>AHL20(2)                                 --------->HSFB2a(1)    <---------ANAC55(2) -------AHL20(2)                          <------------CBF  <-----------GT1    --------->AHL20(2) ------WOX13(1)              --------->TOE2(3)   <---------HSFB2a(1)    <---------ANAC46 ----CBF                  <---------TOE1(2)      ------>ZmHOX2a(2)      --------->ANAC55(2) --->ATHB12    --------->MYB52(1)    ----------->GT1  <---------YAB1    ----------->GT1        <-----   tttatttttaaagaaaaaaacagagtcgtagcattaatcttgtgaattggatcgttctgattttacaaagtgtaacgtaaattataaattttcaacaaat  11261500                              --------->TOE2(3)                              --------->TOE1(3)                     --------->AHL20(2)                            <---------TOE2(3)                       <---------AHL20(2)                            <---------TOE1(3) --------->ZAT6    --------->AHL20(2)                       <---------ICU4       --------->YAB1      <---------AHL20(2)         --------->ARR11(3)                      --------->AHL20(2)   <---------YAB1  <---------YAB1                  <---------ARR11(3)                      <---------AHL20(2)  --------->AHL20(2)   <---------AHL20(2)         <---------CCA1(2)    ---------->DOF2   --------->ICU4      --------->AHL20(1)   --------->AHL20(2)     <---------AHL20(2)   <------ZmHOX2a(1)  <---------ATHB51    <---------AHL20(1)--------->ATHB12          --------->AHL20(2) ----GLK1(2)     ----------->GT1       --------->AHL20(2)  --------->ICU4    ----------->GT1   tcttaggaaagacttggaattgaaataattaagcttaacaaaaatataatactacttagttatgatttatttatatttctggttacatttatatatctat  11261600                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                          --------->YAB1                                                                                       --------->YAB1                                                                                       <---------ICU4               --------->LBD16          ----------->RAV1(1)                         --------->WOX13(1)    --------->ARR14(2)                 <----------ID1                       <---------CCA1(2)     <--    <---------ARR14(2)    --------->AHL20(2)                         --------->GLK1(1)<---------ATHB12   gaagcatttcttcaaaccggactcaaaactaaataaccaaaacaacaaaaccagataaacccaaattgcacatttcccaaatctctcaatcatcaaaatc  11261700  Previous    Next  AGI:  At1g31450.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT2G35615.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70773.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 11259853    to: 11261190    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G23270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69041.1) Range:  from: 11261522    to: 11263345    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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