Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->YAB1                       ------>MYB46(1)                       ------>MYB83                       --------->MYB52(1)                 -------->P                     <---------MYB111(1)              <-----------ARR10                <---------ALFIN1                     <---------MYB59                 ------>ZmHOX2a(1)                --------->MYB46(3)                     <---------MYB46(2)           <<<<<<<<<ARR2                      -------->P   --------->DAG2    <---------MYB111(2)          <<<<<<<<<ARR1                     --------->WOX13(1)  ---------->DOF2   --------->ANAC46              <<<<<<<<<ARR2                    --------->MYB46(3) ------->GT1        --------->ANAC55(2)           <<<<<<<<<ARR1                 ------->GAMYB ----->ANAC58       <---------At4g35610        --------->MYB46(3)              --------->MYB46(3) ----->ANAC58     <-----------GT1         --------->TOE2(3)             --------->AHL20(2) -----AGL15   <----------DOF2             --------->TOE1(3)  --------->ANAC46<-----------GT1    -----   agaaaaaagtcccatacttttcacctaactataaccaattcatacctcaacaatcctatctacccccaagactataaattaaccatcaaccacttcaaag  11258300              --------->GLK1(1)              <---------GLK1(1)                                                                ------     <----------DOF2                                                                 ---------->DOF2    --------------->AGL15                                                       --------->ANAC58    --------->TOE2(3)                                                           --------->ANAC58    <---------------AGL15                                                       --------->ANAC46   ----------------->AGL2   <---------GLK1(2)      --------->AHL20(2)       --------->YAB1     ------ ---->HSFB2a(1)     --------->AtLEC2               <---------AHL20(2)--------->GLK1(1)        <------   attccacctttattagaaatccatacaacaaattcttctcagtaaccagacatataaatctaagaacacagaaatctattacaagcagaaagaaacccac  11258400                                       <---------ANAC58                                   <---------ANAC58                                   <---------ANAC58                                  --------->At4g35610      <---------ANAC58            <---------At4g35610      <---------ANAC58            --------->ZAT2     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ANAC58  <-------GAMYB                   <---------ZAT2            ===================================bZIP_DOF  <---------At4g35610            <---------TOE1(2)          <----------DOF2                <---------MYB52(1) <-----------RAV1(1)      <---------At4g35610         <---------AtLEC2                   <------MYB46(1) >MYB83                   <---------ZAT2    <---------YAB1 <---------ANAC58              <---------DEAR3(2) >MYB46(1)                --------->ZAT2<----------DOF2    <---------ANAC58              <------MYB83 ---ALFIN1                --------->At4g35610  <---------CCA1(2)                     <---------TGA1a   ttgctgttgcctcgcgacttgctctctgagcttcgcagcttgctttcttatagcttccatggctttcaccaaaaacaaatcagactcaagtcggtttctt  11258500                                                   --------->AHL20(2)                                       <-------GAMYB   --------->YAB1                                      --------->MYB46(2)                                      <---------MYB46(3)                                      --------->MYB52(2)                                      --------->MYB55(2)     ------>MYB46(1)                  --------->MYB111(2)     ------>MYB83                     --------->MYB111(1)                                           -   --------->AtMYB61                 <--------P    <---------AHL20(2)                              <-   <---------MYB46(2)            --------->DAG2  <---------ANAC55(2)        <---------TOE1(3)     ---   <---------MYB59             ---------->DOF2   --------->ANAC55(2)        <---------TOE2(3)     <--   --------->MYB46(3)  <---------ARR14(2)      <-----------GT1 --------->At4g35610                <--   <---------MYB111(1) --------->ARR14(2)      --------->AHL20(2)         ---------->DOF2         ---   cagtaccaaaccaatagatcgagaggtttcgccaaaagggtagttgaaattacttaattagaagaagcagagagattaaaggttgagtttttttgcaata  11258600                            --------->MYB52(1)      --------->ZAT6     ----------->GT1    <-----------GT1     --------->DAG2 <----------DOF2        <---------TOE1(3)             <<<<<<<<<<<<<<<<<LFY ----->ZmHOX2a(2)       <---------TOE2(3)          --------->MYB52(1) -----ZmHOX2a(2)        --------->MYB59            <---------DOF5.7(2) ------>ARR11(3)      <--------P                ----------->GT1                                    <- -------ARR11(3)    --------->ANAC46           --------->DAG2                                     <-- -------AGP1     <-----------------AGL1       --------->DAG2                 ---------->DOF2    *TSS ------>AGP1  <----------DOF2  ------->GAMYB ---------->DOF2         --------->ATHB12    --------->At4g35610   gatctttaactctcttctttacaggtaaggtaacagtctgagaaacaaaaaggtaacgacaatggaatgaattagtggagaaagttgaagaagctaactc  11258700                                                                       <---------YAB1                                                                    --------->ICU4                                                                   <---------TOE2(3)                                                         <---------AHL20(2)                                                       <---------YAB1--------->YAB1                                                   <----------DOF2--------->YAB1             ------>ZmHOX2a(1)                      <---------ANAC58             <---------DAG2<---------AHL20(2)         ---------            <----------DOF2         --------------->AtSPL8 <---------AHL20(2)               ---------         <---------ALFIN1     ------------>CBF  <-----------GT1 <---------YAB1           <-----------GT1 --------MYB52(1)     <---------ANAC58       <----------DOF2 <---------YAB1     <-----------TBP --------DOF2   <----------DOF2     <---------------AtSPL8<---------YAB1        --------->AHL20(2)   ctttggtttcaacactttctttttgagtggtcttcaattttgtacttctttaactttatttttatttttaatgatgtttcatttttatatttttccttaa  11258800                                                  --------->ATHB12                                                  <---------AHL20(2)                                              --------->AHL20(2)                                              <---------AHL20(2)                                              --------->ATHB51                                              -------->ATHB1                   <-----------GT1                                              <--------HAHB4                   --------->ARR11(3)             ---------->DOF2                 <---------ATHB12                  <---------ARR11(3)          <---------TOE2(3)                  <---------ATHB51                <---------YAB1    <---------AHL20(2)                       --------->ICU4               <---------AHL20(2)    --------->AHL20(2)                     --------->WOX13(1)             <---------YAB1  <----------DOF2    <---------YAB1--------->AHL20(2)                  <---------AHL20(1) >TOE2(3)<-----------GT1           <---------AHL20(2)                  --------->AHL20(1)       <---- >TOE1(3)--------->MYB52(1)       --------->YAB1 <---------AHL20(2) --------->AHL20(2)    <----------DOF2   tcgtctttaattaacgaaagcttattattctgtctattttaatggcaattatttattggaccgcatgtcaaaaaatattattatcttcatttctttgttt  11258900                                                           --------->AHL20(2)                                                       --------->AHL20(2)                           <                                                       --------->AHL20(1)                           -                                                       <---------AHL20(1)                          --                                                      <---------AHL20(2)                       ------        <---------ARR11(3)                        --------->AHL20(1)                           <-----        --------->ARR11(3)               --------->YAB1<---------AHL20(2)                      <-----      --------->ARR14(2)              <----------DOF2 --------->AHL20(2)                       ------      <---------ARR14(2)           <-----------GT1<---------AHL20(1)   --------->AHL20(2)     -------   <---------ANAC46           --------->YAB1      <---------AHL20(2)   <---------YAB1         <------ -----AHL20(2)               <---------YAB1       --------->AHL20(2)   <---------AHL20(2)<<<<<<<<<WRKY18   atttggcgaatatcgttttcaacatgaggttatcatataactttcataacaataaaataaatttaagacttatataattagtcaattgctgtcaaaataa  11259000                                                                                 --------->At4g35610                                                                               ------>ZmHOX2a(2) ---------AHL20(2)                                                            <------ZmHOX2a(2) -------->AHL20(2)                                                           --------->ARR14(2) ------->AHL20(2)                                                 <---------ARR11(3)      --------->MYB59 --->AHL20(1)                                                     <---------AHL20(1)      xxxxxxxxxxx ----AHL20(1)                                              --------->LBD16   <---------ARR14(2) ----AHL20(2)              <---------DAG2                  <------NtERF2   ----------->ARR10     <--- --->AHL20(2)              <----------DOF2                <---------ANAC46<---------TOE1(2) <-------- -->AHL20(2)          <-----------HVH21  <-----------------AG     --------->AHL20(1) ----------->ARR10 ---AHL20(2)   <---------ARR11(3)     --------->At5g28300--------->ATERF1(1)xxxxxxxxxxxxxxxx>smallRNA(s)   attaaaatactagtcaatttcttcggtcacttttttggactgtaactgatatggttagggccgggcaaaatattcgttcgatccgcttcgattcggtatt  11259100                                   --------->ARR11(3)                                   <---------ARR11(3)                                   <---------GLK1(2)                                 ----------->ARR10                               <---------MYB52(1)                              --------->LBD16                             --------->ANAC46                             --------->ANAC55(2)                          --------->ARR14(2)                          <---------ARR14(2)                         <---------GLK1(1)                                               --------->MYB52(1) xxxxx>smallRNA(i)       --------->GLK1(1)            ----------->GT1 ----------->GT1  <---------MYB52(2) ------AHL20(2)          --------->RVE1(1)  --------->AtMYB61     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -MYB52(1)  ----------->GT1 xxxxxxxxxxxxxxxx>smallRNA(i)<------ZmHOX2a(1)           --------->AHL20(2)   tgatttgatttgattcgaaaaatccaaatatccgtaagattttggaccaaaacaaataggaaaatgtagtattcgtaaaaaccgaatcaaataacgaata  11259200  Previous    Next  AGI:  At1g31440.1    Description:  SH3 domain-containing protein 1 (SH3P1). similar to SH3 domain-containing protein 2 (SH3P2) [Arabidopsis thaliana] (TAIR:AT4G34660.1); similar to Os03g0266700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049658.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP06881.1); contains InterPro domain Src homology-3 (InterPro:IPR001452) Range:  from: 11255817    to: 11258696    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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