Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->AHL20(2)    --------->ANAC58              --------->YAB1    --------->ANAC58              --------->TOE1(3) -------->RAV1(1)                 --------->TOE2(3)        <---------ALFIN1 ----->ANAC46              --------->At4g35610      <----------DOF2 ---ZAT14                  --------->ZAT2       <----------DOF2       --------->YAB1 -->ZAT14            ----------->HVH21        ------->TEIL<---------ZAT18                       <----   caacacaagtcccatatgagtccatgacaagctgaaccataaaatatgcactttcttttgtccaccttggaaacataaactagcaaatgtagaaagaatc  11244000                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                             --------                                    ----------->RAV1(1)                                      --------                      ----------->RAV1(1)                                <---------MYB52(1) <--------                      ------>NtERF2--------->MYB46(3)                 <---------ATHB12    <---------ARR14(2)         <---------HSFB2a(2)     <-----------GT1                      --------->MYB46(3)  --------->ARR14(2)    ------>ZmHOX2a(1)--------->ANAC46                                ------>MYB83        --------->GLK1(1) ------>MYB46(1)     ----------->HVH21    ---------->DOF2            ------>MYB46(1)     <---------GLK1(1) ------>MYB83        <---------ETT(1)    <---------MYB52(1)          -------->P   --------->ATHB12 -------GT1---------->DOF2     <---------WOX13(1)             <----------DOF2    --------->ICU4 -----   accttcctgttcggaaagtttctccgacatttgattaacaacagttaagcgatatttgatgtgtcttttccaaccattaggcaaagattggaaatccgca  11244100      --------->CCA1(2)     <---------ARR14(2)     --------->ARR14(2) -->LBD16                         <-----------GT1                <---------ANAC58 ->ANAC58                      <----------DOF2                   <---------ANAC58 --ANAC55(2)             <---------------AtSPL8      --------->ANAC46       ---------->DOF2    ------ ->ANAC58                --------------->AtSPL8      --------->ANAC58    --------->YAB1     --------- ->ANAC46----------->GT1<---------YAB1               --------->ANAC58    --------->TOE1(3)  --------- -LBD16<-------TEIL   <---------AHL20(2)          --------->ARR14(2)     --------->TOE2(3)<---------ATHB12 ------>RAV1(1)      --------->AHL20(2)           <---------ARR14(2)    --------->MYB46(3)---------->DOF2   acattcagatacagtgacaaacatttattagtactttcaccatttcccttgggataggccacaagatgcctgcaaccataaaccaaaaaccaataagcaa  11244200                --------->TOE2(3)         <---------ANAC55(2)         --------->At4g35610         ----------->GT1       <-----------RAV1(2)                                                        --------->ANAC46     <-----------HVH21                                                            --------->ANAC58    <---------TGA2(1)                                                             --------->ANAC58    --------->TGA2(1)                                                         ------>MYB83    --------->bZIP60(1)                                                       ------>MYB46(1)    <---------bZIP60(1)                                        --------------->AGL15 ---->DOF2      --------->TOE1(3)                              <---------------AGL15       --------->YAB1 >ANAC58>>>>>>>GRF7                                           ----------------->AGL1    --------->RVE1(1) >ANAC58--------->MYB59    ----------->GT1 --------->TOE2(3)<-----------GT1 --------->MYB46(3) ------   agggtgatgtcaggtaaacctaaaatgaaatgtaaacttacaaaacattagagaacaagtttttaccatttggagtcaccaactacgaaaatatcagaat  11244300                                                               ------>ZmHOX2a(2)                   --                ---------->DOF2                                =================================HOX2a_HOX2a   <---------ANAC58                                          --------->ARR11(3)               -------   <---------ANAC58       --------->ICU4                     <---------ARR11(3)               -------   <---------ANAC46       --------->GLK1(2)           --------->YAB1                          ------- --->GLK1(2)--------->ZAT18 --------->TOE2(3)     <----------DOF2                        ------>ZmHOX2a(1)   caattgcttgagattgcacaaaggagaaattcttaatcgtccatgttatcttcttttcatattgatcttccattgttcttgatgaagactcctcacaagt  11244400            --------->LBD16     --------->MYB52(1)     ------>MYB46(1)     ------>MYB83   ------->GAMYB   --------->AtMYB61    ------>ZmHOX2a(1)  --------->MYB46(3)   --------->TOE2(3)                                      <---------------AtSPL8 --------->ANAC58      --------->TOE1(2)                                     <---------ANAC46 --------->ANAC58      --------->TOE2(2)                                     <---------ANAC58 ------->MYB46(3)     --------->YAB1                                         <---------ANAC58 -->ANAC58  ----------->GT1  ---------->DOF2                    --------->HSFB2a(2)           ------- -->ANAC46 --------->HSFB2a(2)                   ---------->DOF2<---------HSFB2a(2)          <------- -->ANAC58 <---------HSFB2a(2)   --------->ARR11(3)             --------->LBD16          <----------DOF2   cacaaccaaacgtccagaaaataatcctaagaaaagaactagaagaagatgaaaagagaataaatccgagaaccgagtggcatgtacaaaactttataat  11244500             --------->YAB1          <---------------AGL15      --------->MYB46(3) --------->ANAC46            --------->ZAT14 --------->ANAC58            <---------ZAT14                        <---------ANAC55(2)             - --------->ANAC58     <---------ZAT6                                <---------YAB1              <---- -->YAB1  <----------DOF2  --------->O2                       <---------YAB1       ----------->GT1<-- --YAB1   --------------->AGL15   <-----------HVH21           --------->ICU4     <------------CBF<---   atcacacaacaacttttataagtagagtcacttcactgtcaaataggtttgaatgtgaatcgtgttgattacgaaaacttgagaattgtgaaaacgcttc  11244600            <------------CBF           --------->ATHB12        <---------At4g35610   <---------YAB1   ------>ZmHOX2a(1)                                                ------>MYB46(1) ----------->RAV1(2)                    <---------ICU4              ------>MYB83 <---------At4g35610<---------------------WRI1                     ----------->RAV1(1) ----->NtERF2  <---------MYB46(3)      <---------ATHB12          --------->MYB46(3)                <- -----DEAR3(1)<---------AtMYB61    --------->AHL20(2)       <----------DOF2                   ------- -------At4g35610 <---------ZAT18--------->ANAC58     --------->ANAC55(2)                     <------ ------ATERF1(1)  --------->ZAT18--------->ANAC58     <---------ANAC55(2)           <---------ALFIN1   ggctcctgatagctcattggtgggctaatagtcccaagtaaatcattttcaaaaacacttgactttcaccaacaaaacattcactaacaccgttttagat  11244700                                                                                       --------->ARR14(2)                                                                                       --------->GLK1(2)                                   <---------TOE1(2)                                   <---------ARR14(2)                             --------->GLK1(1)                       <----------DOF2  ------>MYB83                             <---------GLK1(1)                      --------->TOE2(3) ------>MYB46(1)                          <---------ANAC58                   <-----------GT1     <-----------GT1 --------ANAC46           <---------ANAC58                 <<<<<<<<<SARD1  --------->AHL20(2)  <----- -->At4g35610      --------->ANAC55(2)                     <<<<<<<<<CBP60g <---------AHL20(2) ------- ---At4g35610      <---------ANAC55(2)                 --------->LBD16<---------MYB52(1)  <---------YAB1   gacttatactgagagattgttaagtgatgcgagttccgacgttctaaatgttttctccccaaatttccttcctttatttttttaaaccaaatctgataaa  11244800                                                                          --------->TOE2(3)                                                                       <---------AHL20(2)                                                                 <----------DOF2                                                           <---------MYB46(3)                      --------->ANAC55(2)                --------->ALFIN1 <----------DOF2           --------->TOE2(3)                             <---------MYB52(1) --------->AHL20(2)        <-----------GT1           --------->MYB52(1)  <---------TOE2(3)<-----------GT1 <---------YAB1       <---------ANAC55(2)        <---------AHL20(2)<---------AHL20(2) ----AHL20(2)      <------ZmHOX2a(2)             --------->AHL20(2)--------->AHL20(2) -->AHL20(2)      <---------ARR11(3)            --------->AHL20(2)--------->AHL20(2)          <------   attatgttattaacctcatagatcacataatcaggctaatggccaatacatttaataacgttgggcgatttatttactttaaattctacaaatgtttcac  11244900  Previous    Next  AGI:  At1g31390.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G31400.1); similar to MATH domain containing protein [Brassica oleracea] (GB:ABD65138.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 11243172    to: 11244373    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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