Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                            ---------                                                          <-------GAMYB                  --------->TOE2(3)                                                    <---------ANAC55(2)                <---------ARR11(3)                                                    <---------ANAC58                   --------->ARR11(3)       ------>ZmHOX2a(1)                            <---------ANAC58                   <---------ARR14(2)  ------>ZmHOX2a(1)       --------->ZAT18     <---------YAB1     <---------REM1(1)    --------->RVE1(1) ---------ZAT18    <-----------HVH21   <-----------GT1  ---------->ID1               ------->TEIL<---   agtcctctccttcgatgaatacttcacgcgtactagttttttttcttcatgaatacttgtcgttgtgatgcagcattttgaaacatgaatatcttaaagc  11231900                       --------->YAB1                       --------->TOE2(3)                 ------->TEIL                     <-----------ARR10               --------------->AtSPL8                     --------->ARR11(3)          ------->TEIL                     <---------ARR11(3)       <---------ANAC55(1)                     <---------ARR14(2)       --------->ANAC55(2)                   <----------DOF2                    --------->RVE1(1)         <---------ANAC58                     <---------DAG2 --------DOF2       --------->CCA1(1)         <---------ANAC55(2)            --------->WOX13(1) ->DOF2           <---------GLK1(2)           <---------ANAC58         --------->YAB1               - ------DAG2   ---------->DOF2  <---------MYB59<---------ANAC46        <------ZmHOX2a(2)             <   cttttgcccaaaaaaaaaaagaatatcttaatgcctaatacttggattacgtatttatgtaccagtatcgcgatcaaaacaatcaccttttattcagtca  11232000                          --------->TOE2(3)                          --------->TOE1(3)                                                      <---                       <---------ARR14(2)                                                       -----                 <-------TEIL                                                                  <-----             <---------YAB1------>ZmHOX2a(1)              <----------DOF2                      ------          <---------AHL20(2)       --------->AHL20(1)  --------->ARR11(3)                     -------    --------->YAB1     --------->ARR11(3)              <---------ARR11(3)               <---------AHL20(2) -------->AHL20(2)     --------->ARR14(2)      <-----------GT1                          --------->AHL20(2) ---------AHL20(2)    <---------CCA1(2)<-----------GT1--------->GLK1(1)--------->ANAC46--------->AHL20(2)   aattaaacataatttatgattcatatatcctcaaaaacatattacaaaattaccaggtatctttgtatgctatacaccactattctaaatttaaaaatta  11232100         <---------AHL20(1)         --------->ARR11(3)                      XXXXXXXXXXXXXXXXXXXX>MIR844*   ----------->GT1                            <---------YAB1 ------YAB1                                  --------->AHL20(2)        --------->YAB1 ---->AHL20(2)                               <---------AHL20(2)       <---------ATHB12 ----AHL20(2)                              --------->AHL20(2)         --------->ICU4 --->AHL20(2)                          --------->YAB1  --------->ARR11(3) -->AHL20(2)        <---------TOE2(3) <-------TEIL     <---------ARR11(3)<---------YAB1           ---   atatagagtaatatatactattaagttttaaaaatcgagattcatattaatataaaacatcttactaaaacaatgatcaaagttttattcatatgctcaa  11232200                                            <------MYB83                                            <------MYB46(1)                                           --------->MYB59                  <-----------GT1          --------->MYB111(1)             --------->AHL20(2)            --------->MYB46(2)             <---------AHL20(2)     --------->TOE2(3)            <---------AHL20(2)     <--------HAHB4         --------->ATHB12          --------->ATHB12        <---------YAB1             <---------ICU4                             <-----------GT1    --------->AHL20(2)            <---------YAB1                      <---------GLK1(2)    <---------AHL20(2)  --------->SPL7   <---------MYB52(1)         <---------TOE2(3)            <--- ------>YAB1--------->AHL20(2)  --------->YAB1           ---------->DOF2  <---------YAB1    ---------   taacatttttatgattaaattaagcatacgtcgagcatcattagttaggttccaagtacaaaagcccatttagattattttagcccgtttaaggcccaat  11232300                                                       ------>NtERF2                                                      --------->DEAR3(1)       <---------MYB52(1)                                                     <------NtERF2          <------NtERF2                                                     --------->ATERF1(1)   --------->ABI4(1)                                                    <---------ATERF1(1)    ------>NtERF2                                                   --------->DEAR3(1)     --------->RAP2.3(2)                                                  --------->ORA47(2)      --------->DEAR3(1)                                                  --------->RAP2.3(1)     --------->RRTF1(3)                                                  --------->ATERF1(1)     <---------DEAR3(1)                                                  --------->DEAR3(2)     --------->RAP2.3(1)                                                  <------NtERF2          --------->ORA47(2)                                                 ------>NtERF2           --------->DEAR4(2)                                                 <---------ATERF1(1)     --------->RRTF1(1)                 <---------ANAC58               <---------DEAR3(1)       --------->ATERF1(1)                 <---------ANAC46            ----------->HVH21           --------->ERF1   --------->LBD16              *TSS                     --------->HSFB2a(2)     ----------->GT1<-------GAMYB        --------->REM1(1)        <---------RAP2.6(3)------>NtERF2        --------->RAP2.6(1)      <----------DOF2 <------ZmHOX2a(1)<---------HSFB2a(2) ---------->DOF2--------->RAP2.3(3)    ----      <-----------HVH21     --------->ATERF1(1) --------->DEAR3(1)      <---------ATERF1(1)<------NtERF2    --------->At4g35610     <---------MYB52(1) --------->ATERF1(1)     --------->ANAC46 <---------LBD16    <---------At4g35610   <---------MYB46(3)--------->DEAR3(2)----------->GT1--------->DEAR3(1)------ ------ARR11(3)  <---------ANAC58------>NtERF2<---------ATERF1(1)      --------->ANAC58--------->At4g35610 --->CBF<---------ALFIN1 <------NtERF2<---------LBD16--------->SPL7    --------->ANAC58<---------At4g35610   atgttctgcttcacctcttgcttaggagccgttgccgacttctgggagcgacgccgacgacgaaagggtaaacacgccgccgttgattcagccggagaat  11232400                                        --------->O2                         <------ZmHOX2a(2)                         ===================================HOX2a_HOX2a                        <-----------ARR10                        --------->GLK1(2)                        --------->ARR14(3)                        <---------ARR14(3)                        --------->ARR11(3)                        <---------ARR11(3)                   <---------TOE2(3)          --------->ANAC58------>ZmHOX2a(2)                  <---------TOE1(3)          --------->ANAC58==================================HOX2a_HOX2a                      <-------   ---------->DOF2      --------->ARR14(2)         <---------TOE2(3)                 <---------MYB52(1) ----->ATHB12           <---------ARR14(2)       ---------->DOF2  ---------->DOF2 ---------->ID1 --->GLK1(2)           <------ZmHOX2a(1)<---------O2 <------ZmHOX2a(1)       <---------GLK1(2)   <<<<   caatggaaagtgaagcaattcaagaggatcttcagaatttagacgtcgagttaaaggatgttcaaggttaaagcatttagattcttcgttttgtttttct  11232500                         <---------ANAC46                        <---------AtMYB61                     <----------DOF2                    <---------ANAC58                    <---------ANAC58                                                               <-                    <---------ANAC46              --------->WOX13(1)                   >>>>>>>>>EIN3-                 <--------P<---------ANAC46     <---------ATHB12              --------->ANAC55(2)  --                 <---------MYB52(1)    --------->TOE2(3)                  <----------DOF2   <-------- ----GT1        <-------GAMYB          <----------DOF2              <-----------GT1   <-------TEIL <- <<<<<TBF1     <---------MYB46(3)   <-----------GT1   ---------->DOF2     <---------DAG2    <--------   tcttcgaatttgtgtttcggttgcttttggtgtatatataactttagaaaatcattcaaagtctccattttttctgctttatgtaatatacattgaggtt  11232600 --------TOE1(3)                                         <------ZmHOX2a(1) ---------->GT1                                        --------->MYB59 ------->MYB59                             --------->TOE2(3)             <---------ANAC55(2) -TOE2(3)                                 ------>ZmHOX2a(2) ----------------->AGL1                 <- --------TOE2(3)                          ======================HOX2a_HOX2a  ---------->DOF2       <- -TOE1(3)                   <---------AHL20(2)     <---------ZAT6        <---------ANAC46          <-   ttaggttaattttagacttcatagccatagataattgtctctgatccttgatggtgttaggaaccagaatgggttaagtgaaagttttagtttttttgaa  11232700              --------->ATHB12             <---------YAB1                      --------->ATHB12            <---------MYB52(1)   <-----------HVH21 <---------WOX13(1)    --------->ANAC46       ------->TEIL           <---------AtLEC2  <---------YAB1    <------MYB46(1) --------ANAC46           <----------DOF2     <----------DOF2     <------MYB83                     -- --------ANAC58     <---------GLK1(1)<---------At4g35610          ----------->GT1          ---------- --------ANAC58 <---------WOX13(1)   --------->At4g35610     <---------YAB1    ---------->DOF2 ------   ttcgtgttgaatctgttgattgaaatctctttgcaggtcagataagtgctttgattgagcatcaagataggttatacgagagaaagtctgagttaaagac  11232800  Previous    Next  AGI:  At1g31360.1    Description:  RECQL2 (Arabidopsis RecQ helicase l2); ATP-dependent helicase/ protein binding. similar to ATRECQ4A/ATSGS1/RECQL4A, ATP-dependent helicase [Arabidopsis thaliana] (TAIR:AT1G10930.1); similar to DNA Helicase-related [Oryza sativa (japonica cultivar-group)] (GB:AAX95427.1); similar to ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA95536.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70786.1); contains InterPro domain DNA helicase, ATP-dependent, RecQ type; (InterPro:IPR004589); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); cont Range:  from: 11232314    to: 11237511    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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