Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ALFIN1                                       <---------ANAC46                                     <---------MYB46(3)                                    <---------AtMYB61                                    --------->ALFIN1                                  <---------ZAT2                             <------NtERF2                            <---------MYB46(3)               <---------LBD16    <---------At4g35610             --------->ARR14(2)   <---------O2             --------->GLK1(2)<-----------HVH21        ---------->DOF2    --------->ALFIN1      --------->At5g28300  <---------ANAC58       <---------At4g35610     ----------->GT1       <---------ANAC58    <------ZmHOX2a(1)                                   <-  --------->MYB52(1)       <---------ANAC46 <------ZmHOX2a(1)          <---------LBD16           ---- ----------->TGA1--------->LBD16 --------->MYB111(1)   --------->GLK1(1)                        ----- ----------->HVH21 ----------->HVH21<---------DEAR3(1)--------->ARR14(2)    <--------P ---------->DOF2 --->MYB52(1)<---------ARR14(2) <-----------RAV1(2)   <---------ARR14(2) --------->LBD16        -----   cggatgacggtaaagaatccggtgaagaggcgggtcaggtggtggaggaggaagcggataccattttgaagaaaccgggttgaaacacataaaccggact  11222400                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                <----                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                           --------->ABI4(2)                                                                                           ------>NtERF2                                                                                           <---------RAP2.3(1)                                                                                          --------->DEAR3(1)                                                                                          --------->ANAC46                                                                                          --------->PCF2                                                                                         <------NtERF2                                                                                         --------->RRTF1(1)                                                                                         --------->RAP2.3(1)                                                                                         --------->ATERF1(1)         ----------->HVH21                                                              <---------ORA47(2)         <---------ETT(1)                                                               <---------RRTF1(1)        --------->MYB46(3)                                                              <---------ATERF1(1)        --------->DEAR3(2)                              <---------ARR14(2)     ---------->DOF2------>NtERF2     <---------WRKY18(1)                                --------->ARR14(2)  ----------->GT1<---------ATERF1(1)    ----------->HVH21                                <---------ANAC46     <---------ANAC46<---------DEAR3(1)    --------->WRKY45                                 <---------ANAC55(2)------>NtERF2   <---------RAP2.3(1)    --------->WRKY12                               --------->MYB52(1)   --------->LBD16 <---------DEAR4(2)    --------->WRKY38(1)       --------->DEAR3(2)  ----------->HVH21    <---------LBD16 --------->ANAC46   <--------P    --------->ARR14(2)               ----------->TGA1    <---------LBD16  <---------RRTF1(3) --------ANAC46  <---------ARR14(2)             <---------ZAT6      --------->GLK1(2)  <---------RAP2.3(2) ----->MYB52(1) <---------CCA1(2)           <---------ZAT14         <---------ARR14(2) <---------RAP2.3(3) ------>TGA1  <---------ANAC55(2)          <---------ANAC46 --------->TOE1(2)  ====================== ------>HVH21 --------->ANAC55(2)    ---------->DOF2<-----------------------TaNAC69(2) <---------DEAR3(1)   gacgggttgacccgacccgtatccgatgttgaatcgacgaaaagagcgtagagtgacggaaacgaaggaaattccggcgagtaaagaagacggcgccacc  11222500      --------->O2      <---------TGA1a      --------->TGA1a      --------->ANAC58      --------->ANAC46    --------->ANAC46 --------->ZAT14 <---------ZAT18 <---------REM1(2)                                              <---------HSFB2a(2) <---------ZAT14                                                --------->HSFB2a(2) --------->ZAT18                                               ------>ZmHOX2a(2) --------ZAT14                                                 =================HOX2a_HOX2a ------->ZAT14                                             ----------->HVH21 ------->REM1(2)                                 ------>ZmHOX2a(2) -----ANAC46                  <---------WRKY12  <---------GLK1(1) -NtERF2<---------LBD16       <---------WRKY38(1)===============================HOX2a_HOX2a ->DEAR3(1)            <---------SPL7           <------ZmHOX2a(2) --ALFIN1          --------->MYB46(3)           --------->GLK1(1) >ATERF1(1)      --------->MYB52(1)             ================================HOX2a_HOX2a -ABI4(2)<---------ANAC46 <---------DEAR3(1)   <---------ARR14(2)                                   - -->HVH21<---------DEAR3(1) --------->At5g28300--------->ARR14(2)                                   < >RAP2.3(1)<------NtERF2 --------->SPL7        <---------ARR11(3)                                 <-- >ERF1--------->ANAC58 ----------->HVH21       <---------AGP1  <---------LBD16  ---------->DOF2 ----- ===============bZIP_DOF <---------ORA47(1)    --------->ARR11(3)        ------>ZmHOX2a(1)      <----   gtgtacacacggcggagagtaacgacggacggtgaacgagagacagacagatctctgagatgtgatcgggaagtccttcgattaaagcggagttttcatt  11222600                                         --------->ALFIN1                                         <---------ANAC46                                         <---------AtMYB61                                         <---------DEAR3(1)                                        <------NtERF2                                        <---------ABI4(1)                                        ------>NtERF2                                       <---------RRTF1(1)                                      <---------DEAR3(1)                                     --------->At4g35610                                     <---------At4g35610                                     <---------LBD16                             --------->At5g28300                             <------NtERF2                            <---------MYB46(3)                           <---------DEAR3(1)                          <------NtERF2------>NtERF2                          <---------ABI4(1)                          --------->ATERF1(1)   ----------->HVH21                         <---------ATERF1(1)   <---------WOX13(1)                         --------->LBD16--------->ATERF1(1)                         ------>NtERF2<---------RRTF1(2)                         <---------DEAR4(2)   <-------GAMYB                         <---------RAP2.3(1) --------->MYB55(2)            <<<<<<<<<TBF1<---------ERF1<---------RAP2.3(1)          --------------------->WRI1<-----------RAV1(1)  ----------->HVH21     <---------RAP2.3(2)  <---------MYB46(3)  --------->WRKY38(1)   --------->ATERF1(2) --------->ALFIN1 <---------MYB52(1)     <---------ATERF1(2) <---------AtMYB61 -------->LBD16         --------->DEAR3(1) <-------GAMYB                                    <-------- ---------At4g35610     <---------DEAR3(1) <------NtERF2                                   <--------- -------LBD16          --------->ATERF1(1)<---------MYB46(3) --------->ANAC58             <---------- ---->ARR14(2)         <---------LBD16<---------RAP2.3(2)    --------->ANAC46      <---------CCA1(2) -----ARR14(2)        <---------RAP2.3(1)<---------DREB2C(2) --------->ANAC58 <-----------GT1   tccggtgactgttcttcttcgtttcgccggcggtgattctgcggcggtggttgacattgattcacgccgtttcagttttttttccatctctctctttttt  11222700                                              <---------ANAC46                                            --------->REM1(2)                                            <---------ZAT14                                           ----------->HVH21                                         <---------ANAC46                       <---------ANAC46                                         <---------ANAC58                       <---------ANAC58                                  --------->DAG2                                <---------ANAC58     ---------->ID1              ---------->DOF2                    ----------->GT1  <------ZmHOX2a(1) ----------------ANAC81---------->DOF2   <---------ANAC58         ---------->DOF2 <------NtERF2 -DOF2            --------->ICU4--------->CCA1(2)    <---------YAB1--------->DAG2<---------SPL7 --------------ANAC81<---------YAB1     <------NtERF2--------->ICU4*TSS    ---------->DOF2          -   tgtttttgtttttttttggagttattaaagagagataaaggaggcgtgaagtgtaatgaatgagagggaaaagtaagtaaaggcgtaggagccatacata  11222800                                                       --------->DAG2                                                      ---------->DOF2                                                   --------->ANAC58                                                   --------->ANAC55(2)                                                   --------->ANAC55(1)                ---------->DOF2                    <---------ANAC55(2)        --------->AHL20(2)              ----------------->AGL1               --------->ANAC46       <---------YAB1            <----------ID1                         --------->ANAC58      <---------AHL20(2)           --------->DAG2                         <-------TEIL           --------->AHL20(2)          ---------->DOF2   <---------ZAT6   <---------YAB1             --------->AHL20(2)         ---------->DOF2---------->DOF2    --------->YAB1           <---------AHL20(2)     <---------------------WRI1<-----------GT1<---------ICU4        --------->AHL20(2) -------->YAB1----------------->AGL2      <---------YAB1           --------->AHL20(2) --------->YAB1<   tatcaaaatcgaaaaggccaaagttggaaagtgttaccatctctatcataaatacgtaaagctaacttataaaattaaaattatacatttatagcatcac  11222900                                              --------->AHL20(1)                                             --------->AHL20(2)                                             --------->YAB1                                           --------->AHL20(2)                                       <                                          --------->YAB1                                            -                                     ----------->GT1                                             <---                                    --------->ZAT6               <---------ARR11(3)      <---------At4g35610    --------->YAB1                 <---------YAB1                --------->ARR11(3)      --------->At4g35610   <---------YAB1               <---------AHL20(2)          <---------AHL20(2)         <---------HSFB2a(2) ---------YAB1 <---------O2    --------->AHL20(2)       <---------YAB1                 --------->HSFB2a(2)   atatgattatagtattcaagtggctatagagaattttatcagtaaaataatattagttatatttgattatcttatacagtattttagtttcagaagccta  11223000                      <---------ANAC46                      <---------TGA1a                     <------MYB46(1)                      --------->O2                        --------->MYB52(2)                      ===========================================MYC_MYB                      <---------O2   <---------RVE1(1)    <------MYB83            --------->AHL20(2)      --------->ARR11(3)    <---------MYB46(3)        --------->MYB46(3)          <---------ARR11(3)   <---------AtMYB61        <---------ATHB12    --------->ZAT6              <--------P       -------->P===============bZIP_DOF              --------->MYB55(2)       =========================MYC_MYB               <---------MYB46(3)                       ------      --------->WOX13(1) --------->REM1(2)           <---------YAB1                           ------- ---------ANAC55(2)   <---------ANAC55(2)      --------->ICU4                  --------->AHL20(2) --- -------->ANAC55(2)  <-----------------------TaNAC69(2)<-------GAMYB    <------ZmHOX2a(2)     <------ ------ATHB12    ---------->DOF2    <---------GLK1(2)<---------TOE2(3) <---------ARR11(3) ---------->DOF2   tcaagtatcaaccattaaacaaagacgtgaagactagagatttttagtaagaattgtggttggtttccatcgagatcaatttttaatatcgaaaaagaac  11223100                 <---------AHL20(2)           --------->AHL20(2)           <---------AHL20(1)           --------->AHL20(1)           <---------AHL20(2)                                                  --------->AHL20(2)     ----------->GT1  ----------->GT1                                         <---------AHL20(2) <---------ZAT14 --------->AHL20(2)                                           --------->AHL20(2) --------->ZAT14--------->AHL20(1)                     --------->AHL20(2) ------>ZmHOX2a(1) --->MYB52(1)   <---------AHL20(1)                 <----------DOF2<---------bZIP60(1) -->ARR14(2)    --------->AHL20(2)          <---------ANAC58      --------->bZIP60(1) ------>LBD16   <---------AHL20(2)          <---------ANAC58 <---------ANAC55(2) ---ARR14(2)<---------AHL20(2)        <-----------RAV1(1)    --------->ANAC55(2)         --------->YAB1   cggtgaacagaaataaaatttattttgtaaaaacttagttttgttggcttaagcttttaaaatatgtgacttcatcctatttaaaatatactcatgaaaa  11223200                                                                                         <---------YAB1                                                                                        <---------AHL20(2)                                                                                        <---------AHL20(1)                                                                                      <---------YAB1                                                                                    -------->HAHB4                                                                                    -------->ATHB1                                                                                    --------->ATHB51                                                                                    --------->YAB1                                                                                    <--------HAHB4                                                                                    <---------AHL20(2)                                                                                    <---------ICU4                                                                                   <---------ATHB51                                                                                   --------->ICU4                                                                                   <---------YAB1                                                                                 -------->HAHB4                                                                                 <--------ATHB1                                                                                 --------->YAB1                                                                                 <--------HAHB4                   <---------ZAT6      --------->LBD16                           --------->ATHB51                   ----------->GT1    <---------ANAC58                           <---------ICU4                  <---------TOE1(3)   <---------ANAC46                          <---------ATHB51                  <---------TOE2(3)   <---------ANAC58                          --------->ICU4           --------------->AGL15     <---------LBD16                            <---------YAB1           <---------------AGL15<----------DOF2           --------->DAG2      --------->YAB1     ----        <-----------GT1        <---------DAG2            ---------->DOF2     <---------YAB1    <-----       --------->AHL20(2)<----------DOF2     ----------->GT1    ----------->GT1 --------->AHL20(2)   aaacaagaattaactatattagggttactttagcctttttgcggatgagataaaaaaaaaaaagcagagaaaaatcaccataataattattattttttaa  11223300  Previous    Next  AGI:  At1g31350.1    Description:  F-box family protein. Identical to F-box/Kelch-repeat protein At1g31350 [Arabidopsis Thaliana] (GB:Q8GX29;GB:Q9SHE6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G55270.1); similar to F-box family protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD53653.1); similar to Os06g0711700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058552.1); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPr Range:  from: 11221316    to: 11222767    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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