Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->AHL20(2)                                                     --------->GLK1(2)    --------->AHL20(1)                                                         <---------GLK1(2)    <---------AHL20(2)                                                         --------->ARR14(2)    --------->AHL20(2)                                                         <---------ARR14(2) --------->YAB1                    --------->ARR11(3)                        ----------->ARR10 -->ARR11(3)                     <---------YAB1                    --------->ANAC58 -->GLK1(2)               <------MYB46(1)                          --------->ANAC46         --------- ---ARR11(3)              <------MYB83         <----------DOF2     --------->ANAC58         <-------- ->RVE1(1)---------->DOF2 ----------->GT1 <<<<<<<<<MYB2  ----------->GT1 --------->ZAT6  <---------AHL20(2)   taaaaataaaataaaagaatgtaatggatggttttatgattttggttttctttgaaaaattgttaaaacactcaaacactagattctctattttttagaa  11181300                               <---------AHL20(2)                              --------->AHL20(2)                     <---------AtLEC2                                      --------->AtMYB61               <---------ARR11(3)                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ARR14(3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               --------->ARR14(3)    <---------ARR11(3)                 <-----------GT1  <---------ARR11(3)         <-----------GT1   --------->CCA1(2)                    ----------->GT1          --------->ARR11(3)      <---------AHL20(2)----------->GT1  ----------->GT1    --------->GLK1(2)<---------ALFIN1 >HSFB2a(2)    --------->GLK1(2)     --------->ARR11(3)     <---------ARR11(3) --------->ANAC58 -HSFB2a(2)    --------->ARR11(3)    <---------GLK1(2)      --------->ARR11(3) --------->ANAC58   aaacttatttttttcaaaatcttgaatggatataaaatagattttgaaaaaaactaaaccaaaatctagtttaaaaaccacacccattcaaggtcttaaa  11181400                                       <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(2)      ----------->GT1                                      <---------AHL20(1) ---------->DOF2          --------->ANAC55(2)    <---------ARR11(3)<-------GAMYB    --------->AHL20(2)           --------->ARR11(3)<---------At4g35610   <---------AHL20(1)           --------->YAB1     --------->At4g35610            ------->TEIL   <---------AHL20(2) <---------AHL20(2)          ----------->GT1     --------->DAG2   --------->AHL20(1) --------->AHL20(2)       <------ZmHOX2a(1)     ---------->DOF2          <------   actaaaatatttatgtattagttttaaattacaaagataataaaattgaggacagttgaaaaagaagaaaaaaaagtttgtatgtatttggaagttattt  11181500                                                                 <---------HSFB2a(2)                                                            --------->HSFB2a(1)                                                            <---------HSFB2a(1)                                                            --------->HSFC1(2)                                                            <---------HSFC1(2)                                                            --------->KAN4(1)    <---------ICU4                                                       --------->ANAC58     <---------AHL20(2)                                                   <-----------HVH21   <---------DAG2                                                  <---------ANAC46  <---------ARR11(3)                                               <---------MYB52(1)--------->HSFB2a(2)                                              <-------GAMYB <---------KAN4(1)<---------AHL20(2)                                            <---------TOE1(3)--------->KAN4(2)   <-----------GT1                                            <---------TOE2(3)--------->TOE1(2)--------->YAB1<--------                                           <---------At5g28300   <---------HSFC1(1) --------------->AGL15                                          <-----------GT1  <---------KAN4(2)--------->AHL20(2)     <- ---YAB1         ---------->DOF2    <---------MYB52(1) --------->ANAC58<----------DOF2 ------>ZmHOX2a(1)   ttctcaagtagaatactgtgaaagacgattcaacatcccttattttacggttgtgtcaaggaacattcgagaactttttttaataactccttaagggaca  11181600                                                                       <---------ARR14(2)                          <---------GLK1(2)                            --------->ARR14(2)                   ------------>CBF   <----------DOF2             --------->TOE2(2)              <----------DOF2   ----------->HVH21          --------->YAB1  <------MYB46(1)            ---------->ID1<---------ANAC58       <----------DOF2  --------->TOE1(2)            ------ --ID1     <-----------GT1<---------ANAC58   <----------DOF2   <-----------GT1              --------- --------ARR11(3) <-----------GT1     <---------DAG2      <---------YAB1   <------MYB83     *TSS  ---   agttctctctgtttttcttttttcaatagcttctctgacactttattctttctttctgatattataaacctccgatttggtttagttcaaaactagaagc  11181700                                                       <---------ATHB12                                                  <------ZmHOX2a(2)                                                  =================================HOX2a_HOX2a             --------->ANAC58                    --------->ARR14(2)             <---------ANAC55(2)                 <---------ARR14(2)             --------->ANAC55(2)                 --------->AGP1                  <---------ANAC46             --------->ANAC55(1)                --------->At4g35610              <---------ANAC58             --------->ANAC58                <------ZmHOX2a(2)               <---------AtMYB61 ------    --------->GLK1(2)                       <-----------HVH21               <------ZmHOX2a(1)<------- --->At4g35610  ---------->DOF2           --------->LBD16          <-------GAMYB--------->ALFIN1 ->DOF2      --------->ANAC46            <---------HSFB2a(2)      <---------MYB46(3)         <------- ------>At4g35610    <----------DOF2     --------->HSFB2a(2)     --------->ALFIN1<---------ANAC58   agcaaaattctgaacacgtaaagctttgtttcactcagtgtttcccgatcagatccaatggagagaggtggttatcgaggaggtcgtggtgatggccgtg  11181800                                                                     <------NtERF2                                                                    --------->LBD16                                                                   <---------ANAC46                                                                   <---------DEAR3(1)                                                                  <---------At4g35610                                                                  <---------LBD16                                                                  --------->At4g35610                                                                  --------->ATERF1(1)                                                                  <---------ABI4(1)                                                                  <------NtERF2                                                                 <---------RRTF1(1)                                                                 <---------RAP2.6(1)                                                                 <---------ATERF1(1)                                                                 <---------DEAR4(2)                                 ===========================HOX2a_HOX2a                               --------->ALFIN1                  <---------ERF1                               <---------------------WRI1        <---------ORA47(2)                              <------ZmHOX2a(1)                  ------>NtERF2                            --------->ALFIN1                     <---------RAP2.3(1)                           --------->ATERF1(1)                  --------->DEAR3(1)                           <------NtERF2                        <---------RRTF1(3)                         <---------ANAC46                       <---------ATERF1(2)                         <---------DEAR3(1)                     <---------DREB2C(2)                         --------->ALFIN1                       <---------RAP2.3(3)                      --------->ALFIN1                          <---------DEAR3(1)                      <---------DEAR3(1)                        <---------RRTF1(2)                     --------->ATERF1(1)                        <---------RAP2.3(2)                   <---------ANAC58                             <---------RAP2.6(2)        <---------ANAC58<------NtERF2                         <---------RAP2.3(1)            --------        <---------ANAC58--------->ATERF1(1)                  <---------DEAR3(1)            <---------ANAC46      <------NtERF2<---------ANAC58             ----------------------->TaNAC69(2)    <---------MYB46(3)    --------->ALFIN1 <------NtERF2  <------ZmHOX2a(1)       --------->SPL7            <---------ANAC58    <---------RAP2.6(2)<---------ATERF1(1)     <---------ANAC58<---------ABI4(1)<---------ANAC46 <---------AtMYB61 <---------DEAR3(1)          <---------ANAC58--------->ATERF1(1)    <---------ANAC58 --->ALFIN1        <---------ANAC46 ========================HOX2a_HOX2a         <---------ANAC58 --ANAC58         <---------LBD16<------ZmHOX2a(1)   ------>ZmHOX2a(2)          <---------ANAC58 --ANAC58  <---------MYB46(3) ==============================HOX2a_HOX2a        --------->ALFIN1   gtagaggtggccgtggttatggcggaggcggaggaggaggagaacaaggtcgtgatcgtggctacggcggcggagaacaaggtcgtggtcgtggctcaga  11181900          --------->GLK1(1)          <---------GLK1(1)         <---------ARR14(2)       --------->LBD16      <---------ANAC46     --------->ATERF1(1)     --------->RAP2.3(1)     --------->At4g35610     <---------LBD16                                                        --------->TGA1a     <---------At4g35610                                                    --------->bZIP60(2)     <------NtERF2                                                      ------>NtERF2    <---------ERF1                                                      <-----------HVH21    <---------DEAR4(2)                                                 --------->ANAC46    <---------ORA47(2)                                                 --------->ANAC58    ------>NtERF2 --------->WRKY18(1)                                  --------->ANAC58    <---------RRTF1(1)                                               <---------ATERF1(1)    <---------RAP2.3(1)                                             --------->AtMYB61    <---------ATERF1(1)                                       --------->LBD16               ---------    <---------RAP2.6(1)                                      <---------ANAC46             --------->ALFIN1   <---------RRTF1(3)                                       <---------ZAT2  --------->At4g35610   <---------DREB2C(2)                                    ---------->CDC5   --------->O2<---------ANAC46   <---------RRTF1(2)                                     <---------WRKY12  =========================   <---------RAP2.3(3)                           --------->ANAC58  <---------HSFB2a(1)  <---------ANAC58   --------->ATERF1(2)                           --------->ANAC46<---------PCF5         <---------ANAC58   <---------ATERF1(2)                           --------->ANAC58------>NtERF2        <------NtERF2   --------->ALFIN1<---------WRKY38(1)    <---------GLK1(1) --------->At4g35610      ------>NtERF2   <---------DEAR3(1)                    <---------ARR14(2) <------NtERF2 <-----------RAV1(2)   <---------RAP2.6(2)            --------->MYB46(3)      <-----------RAV1(2) ----------->HVH21   <---------RAP2.3(2)   <---------ANAC58<---------GLK1(2)============================MYC_MYB  <-----  <---------ABI4(1)<---------WRKY12----------->RAV1(1)  <-----------HVH21<---------MYB52(1) <--------  --------->ATERF1(1)    <---------ANAC58--------->ARR14(2) <---------LBD16 <---------At4g35610------ <---------ATERF1(1)     <---------ANAC46<---------ARR11(3) <---------At4g35610     --------->ALFIN1 -->CDC5<------NtERF2   --------->ALFIN1<------ZmHOX2a(1) <---------WRKY38(1)<-----------HVH21-------   gcgaggcggcggaaatcgtggtcaaggtcgtggtgaacaacaggattttcgaagccagagtcagcggggacctccgccaggtcacggtggccgtgggacg  11182000                                   ------>NtERF2                                   <---------ATERF1(1)                                  --------->DEAR3(1)                                 --------->ERF1                                --------->LBD16   ------>NtERF2                                --------->At4g35610                                <---------At4g35610                               --------->ANAC46   --------->LBD16                                  <-                              <---------LBD16   <---------LBD16                                ------                              <------NtERF2     --------->ATERF1(1)                            ------                            <---------ARR14(2)  <------NtERF2                                  <-----                            <---------PCF2     <---------ATERF1(1)                             ------                            --------->ARR14(2)--------->ARR14(2)                               <-----                           --------->ATERF1(1)<---------ARR14(2)                               <-----                          <---------ATERF1(1)--------->ATERF1(1)                              <------                       --------->O2<---------At4g35610                                        -------                       <---------TGA1a <------NtERF2                                          <------                       <---------ZAT2  --------->ATERF1(1)                                    -------                       --------->ZAT2--------->DEAR3(1)                                       =======                   ----------->RAV1(1)<---------ATERF1(1)                                     <------   --------->ARR14(2)  --------->TGA1a<-----------HVH21                                       <------NtERF2   <---------ARR14(2)<-----------RAV1(2)    <---------ATERF1(1)                               <------  --------->GLK1(1)--------->AtMYB61--------->ATERF1(1)                                     <-------- -->HVH21 =======================MYC_MYB   <---------TOE1(2)                                <-------- =================MYC_MYB--------->ALFIN1 <-----------RAV1(2)     <-------TEIL        <--------P----- ----DEAR3(1)      <---------ALFIN1--------->ZAT2<---------DEAR3(1)      <------ZmHOX2a(1)  <-------- -SPL7    ------->GAMYB<---------O2--------->At4g35610            --------->ZAT14     =============== ----->HVH21      --------->MYB46(3)--------->RAP2.3(1)        <---------DEAR3(2) <---------ANAC46 <- -->SPL7 --------->MYB46(3)<------NtERF2  --------->ATERF1(1)<---------LBD16<------ZmHOX2a(1)------>NtERF2   acgcagttccaacagcctcgaccacaggtggctccgcagccgtcgcaggctccggcgagttatgccggttcagtaggaggagtcgctggtagaggcgcgt  11182100      --------->ANAC58      --------->ANAC58      --------->ANAC46     --------->SPL7   <---------SPL7 --------ANAC46 ->MYC2 ->PIF5 --MYC3 ->MYC3 --MYC2 --PIF5 ---ANAC58 -->ALFIN1                                       --------->AtMYB61 ---ANAC46                                       --------->DEAR3(1) -->TGA1a                                        <---------ALFIN1 =========================================bZIP_DOF  --------->DEAR3(1) ---TGA1a         <---------ANAC58              <---------ABI4(2) ---ANAC58        <---------ANAC58           --------->At4g35610 -ANAC46          <---------ANAC55(1)       --------->ANAC58           <---------ANAC58     <-------- -ANAC58          <---------ANAC46          --------->ANAC58           --------->MYB52(2)  <---------AHL20(2) ---->ALFIN1   <---------ARR14(2)          --------->AtMYB61           <---------ANAC58    --------->AHL20(2) -ANAC58 ----------->RAV1(1)   <----------DOF2<---------ALFIN1  ------->TEIL   --------->ARR14(2) ===MYC_MYB<-----------RAV1(2)<---------GLK1(2) --------->MYB46(3)   <---------MYB52(1)   --------->YAB1 --------PCF2  --------->ARR14(2)      --------->SPL7  <---------MYB46(3)      <---------ARR14(2)   ggggtcgtaagccacaggttccgtctgattcggcttctccgtccaccagcaccaccgtggtttctgaacccgttcgtggtatatatgctcaattttaatt  11182200  Previous    Next  AGI:  At1g31280.1    Description:  AGO2 (ARGONAUTE 2); nucleic acid binding. similar to PAZ domain-containing protein / piwi domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G31290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62291.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66699.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44446.1); contains InterPro domain Argonaute and Dicer protein, PAZ (InterPro:IPR003100); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Stem cell self-renewal protein Piwi (InterPro:IPR003165); contains InterPro domain Regio Range:  from: 11181692    to: 11185325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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