Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ------>ZmHOX2a(2)                                                                   ==================HOX2a_HOX2a                                                                   <------ZmHOX2a(2)                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                                                  <---------AGP1                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                ----------->ARR10                                                             --------->ANAC58                                                          <---------ZAT2                                                          <---------At4g35610                                                       --------->TGA2(2)                                                      <-----------HVH21                                                      <-----------TGA1                                                     --------->ANAC58                                                     --------->O2 <-----------ARR10                                                     --------->ANAC46                       <---------CCA1(2)             --------->REM1(1)                 <---------ZAT18                     --------->ANAC58<----------DOF2                 --------->ZAT18                     --------->TGA1a=================HOX2a_HOX2a              <---------ANAC58                       <---------O2<---------CCA1(2)              --------->ANAC55(2)                    --------->bZIP60(1)         <---------ANAC58              <---------ANAC58     <------ZmHOX2a(1) <---------bZIP60(1)         <---------ANAC58             ------->TEIL     <-----------HVH21      ===========================bZIP_DOF         <---------------AtSPL3 <-----------RAV1(2)  --------->bZIP60(2)         <---------ANAC46 ->TEIL------->TEIL  <---------CCA1(2)    --------->MYB52(1) --------->ANAC58 ------>ZmHOX2a(1)   atggccatgaacctgtacgtgccctatctcttggtcaggagtctcaacggatgctacgtcagcacgtagatctttccttcctgacttggtgaagacgctg  11176900                                                            ----------->GT1                                                         ---------->DOF2                            --------->ANAC55(1)       <------NtERF2                            --------->ANAC58          --------->RAP2.3(1)                         <---------REM1(2)           <---------ATERF1(1)                       --------->REM1(2)             ------>NtERF2                    <---------ANAC58                 --------->LBD16                    <---------ANAC58                <---------ATERF1(2)            --------->TOE1(3)              --------->YAB1--------->ANAC46        --------->DEAR3(1)             --------->TOE2(3)             <---------ATHB12                       <---------DEAR3(1)           <---------TOE1(3)           --------->WOX13(1)                      <---------LBD16               <---------TOE2(3)          <---------WRKY12  --------->ANAC58   ---------->DOF2                   <---------YAB1     -          <---------WRKY38(1)         <---------ICU4--------->ATERF1(2) <-----------RAV1(2)     -----   gtggtaatagagtcaaccatgagcgtgaacacggcagacatcatggctacaaagccggcgaaaggaaacttgtgccaggggttatcgttaagacaaggag  11177000                                                              <------NtERF2                                                            <---------DEAR3(1)                                                          --------->LBD16                                                         <---------HSFB2a(2)                        --------->ANAC58                 --------->HSFB2a(2)                        --------->ANAC58                 <---------ANAC46           ---------->DOF2     <---------AtLEC2         <---------LBD16        --------->HSFB2a(2)   <-------TEIL          --------->HSFB2a(1)        <---------HSFB2a(2)  --------->AtLEC2       <---------HSFC1(2)            <------ZmHOX2a(1) <  --------->ANAC58  --------->ANAC58                --------->HSFC1(2)    <---------TOE2(3)     <----  --------->ANAC58  --------->ANAC58                <---------HSFB2a(1)  <-----------GT1       <----- --------->DOF2   <-----------RAV1(2)              <---------YAB1    --------->ARR11(3)    <---------GLK1(1) ---->At4g35610 --------->GLK1(2)                <------ZmHOX2a(1)   <---------ARR11(3)    --------->GLK1(1)   atgaaagcatctcgaaagaatcaggcaagacatgcatgaaaccagtggaaaggatgattccggaggcgaaagattttacgatgaggaagtgagatttctc  11177100         --------->LBD16                                                                           <-    ---------->DOF2                --------->ANAC58                                        --------->CCA1(2)  <------MYB46(1)           --------->MYB52(1)                                             <------ZmHOX2a(2)  <------MYB83            <---------MYB52(2)                                              --------->ARR11(3) --------P              ---------->DOF2 --------->MYB46(3)                                <---------ARR11(3) -----LBD16        ------>ZmHOX2a(2)<------NtERF2                           --------->YAB1--------->AGP1 ----LBD16      --------->ATHB12   --------->ANAC58     <---------ZAT6    <---------WOX13(1)------>ZmHOX2a(2)   gggttggaaagcgggaattgatcgggcaaagaacgggaggcaaacaccgattagactagtgatgagaattgagaagattgataagagtttgagatctaat  11177200                                                                         <---------GLK1(1)                                                                         --------->GLK1(1)                                                                        --------->ARR14(2)                                                                      --------->LBD16                                                                     --------->LBD16                                                                    --------->LBD16                                                                    <---------LBD16                                                    XXXXXXXXXXXXXXXXXXXX>MIR159C                                             <---------YAB1         <---------HSFB2a(2)                                            <----------DOF2         --------->HSFB2a(2)                                           --------->YAB1          <---------LBD16                                           <---------ICU4      --------->ZAT2                                          <---------ATHB12     <---------ZAT2                                   <---------WOX13(1)          --------->At4g35610                                 --------->ATHB12   XXXXXXXXXXXXXXXXXXXX>MIR319A/B                                <---------YAB1--------->ATHB12 --------->GLK1(1)                      <---------MYB46(3)--------->WOX13(1)     <---------GLK1(1)               ------ ---------DOF2        --------->MYB111(1) --------->ICU4       <---------At4g35610          <------ZmHOX2a(1)   gctttgtttttgtctatacatgagtagttggattttgattggcaatctttattggattgagagagagctcccgggaaatgcgagatggagagtaggagaa  11177300                                                      <---------ANAC58                                                      <---------ANAC46              <------NtERF2                           <---------ANAC58               <-------TEIL ---->DOF2 <------NtERF2                 <----------DOF2                        ---------->DOF2   agagagcgatggaggcagagaaaatgacatgagatttagtcatctttctatttgtttcttgtggagttttttgagtttgatacaaagtacattatgtctt  11177400                                                    <---------DDF1                                                   <---------bZIP60(1)                                        ---------->DOF2          --------->WOX13(1)                                       --------->YAB1           <---------AHL20(2)               <---                                      <---------ATHB12          --------->AHL20(2)             ------                                  ------------>CBF <<<<<<<<<<bZIP23                            <-----                                 --------->TOE2(3) <<<<<<<<<<bZIP19   <------------CBF         ------                              <---------ALFIN1     --------->ETT(2)<---------ATHB12            <-----                        ------->TEIL--------->WOX13(1)       <---------ICU4                    <-----           <----------ID1 --------->TOE1(2)        <---------ETT(2)------------>CBF            ------   aatcttcttatataagacaagacttgaaccctcgacctcaatcaaagtaagtgtcgacattactaattaatcaattgtcaacatgttttgtttagaagat  11177500                                                                                             --------                                                                                            <--------                                                                                          --------->YAB1                                                                                          <---------ICU4 ---------CBF                                          <---------ANAC46                  <---------ATHB12 --->ARR11(3)                                          <---------ANAC58               --------->AHL20(2) ----ARR11(3)                                          <---------ANAC58               <---------AHL20(2) --->ARR14(2)                                        --------->ARR11(3)              --------->AHL20(2) ----ARR14(2)                                   --------->AHL20(2)               --------->AHL20(2) ----ARR14(3)                                   <---------AHL20(2)               <---------AHL20(2) --->ARR14(3)---------->DOF2                    ----------->TBP                  --------->AHL20(1)   attgaaatactcaaaaaaagtctaaactaattctaggcatacacacacatataaatttcttgaatatgttctcacttgcaaaataaaataaatcatgata  11177600                                                                                            <--------                                                                                        <---------AHL20(2)                                <-----------TBP                                <----------DOF2                              --------->CCA1(2)                             <---------ARR11(3)                             <---------ARR11(3)                             --------->ARR11(3)                             --------->ARR11(3)                          --------->AHL20(2) --------- --------->ARR11(3)      ---------->DOF2                      --------->AHL20(2)       --------->AHL20(2) ->YAB1                --------->ARR11(3)  ---------->DOF2  <---------------AGL15   <---------ZAT6 -YAB1             ---------->DOF2   ----------->GT1    --------->AHL20(2)<---------AHL20(2)---------   gtagttcttggttataacttataaagataaagatatatatagagaaaaagaaattcaatttcatatatatagtcattaaatctttagtattaaataaaat  11177700         --------->ANAC55(2)         <---------ANAC55(2)         <------MYB46(1)         <---------ANAC46         <------MYB83                                                    <---------AHL20(2)         <---------ANAC55(1)                                           <---------CCA1(1)        --------->MYB111(1)                                           <---------ARR11(3)        --------->MYB59                                         ----------->GT1      --------->ICU4                        --------->AHL20(2) --------->DAG2  --------->At5g28300             --------->ANAC46             <---------TOE2(3)                    < ----------->GT1                 <---------LBD16             ---------->DOF2                        - -AHL20(2)                     --------->ARR14(2)  --------->DAG2     --------->ARR11(3)     <------- >AHL20(2)                     <---------ARR14(2) ---------->DOF2   ----------->ARR10        <------- >AHL20(1)           <-----------GT1  ----------->GT1     --------->YAB1 <---------YAB1    --------->ARR11(3)   gaactgtaattaggtgttatatttttctcgttgtatacgggagtaataaactaaaagtaatcaaaaaggttagatattattgtataggtcaaatttcttg  11177800  Previous    Next  AGI:  At1g31260.1    Description:  ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter. Identical to Probable zinc transporter 10 precursor (ZIP10) [Arabidopsis Thaliana] (GB:Q8W245;GB:Q9SHF4); similar to IRT1 (IRON-REGULATED TRANSPORTER 1), cadmium ion transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G19690.2); similar to iron transporter protein IRT1 [Nicotiana tabacum] (GB:BAF48330.1); contains InterPro domain Zinc/iron permease, fungal and plant; (InterPro:IPR004698); contains InterPro domain Zin Range:  from: 11175540    to: 11177343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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