Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC58                  --------->ANAC46                  --------->ANAC55(2)                  <---------ANAC55(2)                  ----------->GT1                --------->CCA1(2)               --------->ARR14(2)               <---------ARR11(3)        --------->At4g35610  <---------ANAC46      ==================HOX2a_HOX2a      <------ZmHOX2a(1) <---------ICU4      =================HOX2a_HOX2a                                                 --------->AHL20(2)  --------->LBD16------>ZmHOX2a(2)                                                 <---------AHL20(2) ---------At4g35610    --------->ICU4                                             --------->AHL20(1) ---------LBD16<---------ARR14(2)                                                 <---------AHL20(2) -------->At4g35610--------->LBD16                                                <---------AHL20(1) ------NtERF2 <---------GLK1(1)                                            ------>ZmHOX2a(2) ------->MYB52(1)<-------TEIL<---------ANAC58                            <---------ARR11(3) ----->ATERF1(1)<------ZmHOX2a(2)                                      ----------->ARR10  <---------TOE2(3) ---NtERF2   ----------->ARR10              <---------ANAC58         <----------DOF2   <---------AHL20(2) ------ABI4(2)<---------HSFB2a(1)           <---------ANAC58  <---------ANAC46    --------->AHL20(2) -----ATERF1(1)--------->ARR11(3)       <----------DOF2      <-------TEIL--------->ARR11(3)        --   gcaccggaggagcagaagatccgtaacaattgcctatacatgctttgccttccctagcctcgattcgtatgctttgatcttcaatttattttaagaaaaa  11167100                --------->ZAT18                  --------->YAB1         ---------->DOF2                <---------ZAT14               --------->TOE2(3) ------>ZmHOX2a(2) <---------TOE2(3)               <---------------AGL15        --------->ARR11(3)                <---- -------->DOF2  --------->ZAT14  --------------->AGL15        <---------ARR11(3)                -----   acaaaggtatcaaattagtatactgtatatgttttcaaaaactagaaacattaatcacatatatgatctgtagtaaaagaaaaattccaaatgttttttt  11167200            ---------->DOF2      --------->AHL20(2)                                                                     -------- -----AHL20(2)              <---------YAB1                                   <-----------GT1--------- ---->AHL20(2)  ---------->DOF2 ----------->GT1               --------->TOE1(2) <----------DOF2   aaatccaaaaatataaaagaaagatagattatagtagtaaaaatagcttaagtttaacttagaacatgtgagtttttttttactttgtttttaaaacggc  11167300                                                                                                   --                                              <---------WOX13(1)                                 ----                                            --------->ATHB51                                     ----                                            --------->ATHB12                                    -----                  --------->AHL20(2)       <---------AHL20(2)                                --------                --------->TOE2(3)          <---------YAB1                                 --------->ARR14(2)    <-----------GT1             --------->ANAC58                                          <---------ARR14(2)  --------->AHL20(2)  <-----------GT1  ----------->GT1 --------->YAB1                <-----------GT1 ->ANAC46----------->GT1        --------->ANAC58       --------->AHL20(2)   --------->ZAT14  -------- >RAP2.6(3)    --------->YAB1   --------->ANAC46----------->GT1        <XXXXXXXXXXXXXXXXXXXXMIR417<--   agaatttaacatggtaaacataaattacatttccacacaacttgtataattggttaattatacaaaaatgtgaacaacttcactattttacgaattcgca  11167400 ------->YAB1                                               ---------->DOF2 ----->ANAC58                                              ------>ZmHOX2a(1) ----->ANAC58                                      --------->ANAC58 ---->WOX13(1)                                     --------->ANAC58 ->ANAC58                   --------->CCA1(2)    ---------->DOF2 ->ANAC58    <---------AHL20(2)      ------------------------>ANAC81 -------ATHB12             <----------ID1---------->DOF2  --------->TOE2(3)   atcaaaaattcacatttacttacaagagagagacaagaagaggcaaagaagaaaagccatcctaaagtattggtttgccatagctaaacaatgttttggt  11167500                                                     --------->AHL20(2)             <---------DAG2                   <----------DOF2                 <-----------TBP                  <---------------AGL15              <---------MYB52(1)                 --------->AHL20(2)                 <----------DOF2 <             <-------GAMYB                   <---------ANAC58                       --------------->AGL15            <---------MYB46(3)               <---------ANAC46                      <-----------------AGL3      <---------ANAC58                       <---------ANAC58               <----------DOF2       ---      <---------ANAC58             --------->STY1(2) <---------AHL20(2)     <---------DAG2    <------     --------->ATHB12       *TSS   <---------STY1(2) <-----------TBP       <---------GLK1(2)  -------   attggaatgcttgatggttagcttttgtgagagaactagctactcttgcgtttatttatatatcggatgaaaaaacagcttttccactttatttggaatg  11167600                                    <---------YAB1                                  <---------ICU4                                  --------->YAB1                               <--------HAHB4                               <---------ICU4                              --------->ICU4     --------->YAB1                           <---------YAB1     --------->YAB1 ----------DOF2           <-----------GT1--------->ANAC55(2) ---->TEIL  <---------GLK1(2) <---------YAB1 <---------YAB1   <---------ARR14(2) ---KAN4(2) <------------CBF--------->YAB1--------->ICU4      <---------GLK1(2) -------->AtSPL8<---------ANAC46 <---------YAB1 <---------YAB1--------->ARR11(3)   tactttaagtttcagattgtgtctatattttcattattatgacacttattatcatgaaatttcagattttgtctatatttcatattggattttgtctata  11167700                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                            <---------AHL20(2)                                                                           --------->AHL20(1)                                                              <---------------AGL15                                                              --------------->AGL15      --------->AHL20(2)             <-----------GT1                                  =======================================         <---------RVE1(1)                                  ---------->ID1 <---------AHL20(2)        --------->ARR11(3)                          <---------AHL20(2)     <---------AHL20(1)    <---        <---------GLK1(2)      --------->ARR11(3)   --------->AHL20(2)     --------->AHL20(2)    ----        <---------ARR11(3)     <---------GLK1(2)  <----------DOF2   --------->YAB1       <---------AHL20(2)   tttcatattagattttttctatatttcatattagattttgtctatatacagactttaattttgtcttcaattagaaatttatttcgtctatatatataga  11167800                             --------------->AGL15                            ----------------->AGL3                            ----------------->AGL2                            <-----------------AGL3                            ----------------->AG                           <------ZmHOX2a(2)                         ------->GAMYB                      --------->MYB52(1)                    --------->MYB46(3)          <---------YAB1--------->MYB46(3)         --------->LBD16         <-----------GT1<---------ATHB12    <---------ARR14(2)        --------->YAB1------>MYB83          --------->ARR14(2)    <---------ZAT14                  <-       <---------YAB1 ------>MYB46(1)       <---------ARR11(3)    --------->ZAT14           <--------   <----------DOF2  <---------MYB55(2)      --------->ARR11(3)  <---------YAB1           <-----------GT1 =============================================MADS_MADS   <---------AHL20(2)         <----------DOF2 ------At4g35610   --------->ANAC46        <---------CCA1(2)  <-----------GT1        <---------DAG2<- ----->At4g35610 <---------WRKY18(1)   ----------->GT1   --------->AHL20(2)   ---------->DOF2   <----   gcagactttattatcagtttgacccaacgatccaaaatagggagtatatcttccacagataaaattactatacagtttttcaaagtgcttttttctttct  11167900                                          <---------ANAC55(2)         <---------DAG2                   --------->ANAC55(2)         <----------DOF2                  <---------ANAC58                        ------>ZmHOX2a(1)      ------->TEIL                        <---------ANAC58                        <----------DOF2     <-----------GT1                    <---------AHL20(2)                   <---------CCA1(2)     ---------->ID1                 <---------AHL20(2)                  <-----------GT1  --------------->AtSPL8            --------->ICU4                    --------->DOF5.7(2) <---------MYB52(1)                 --------->AHL20(2)         --------->TOE2(3) --------->TOE2(3) --------ANAC58                ----------->GT1                 <----------DOF2<---------ARR11(3) --DOF2 <---------DAG2    --------->AHL20(2)      --------->AHL20(2) --------->TOE1(3)         <----- --------ANAC58    <---------AHL20(2)   <-----------GT1  ------->TEIL--------->TOE2(3)      <-------- ------DOF2        --------->AHL20(2)<---------ICU4   ----------->GT1<----------DOF2  --------->ZAT6   ttcgtttgtacctttttgtattaaaaaataaaacagaaaaaattacttgatataaaatgtatatactttaactttaactatatcctttacactactgttg  11168000  Previous    Next  AGI:  At1g31250.1    Description:  proline-rich family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22485.1); similar to hypothetical protein NEMVEDRAFT_v1g69077 [Nematostella vectensis] (GB:XP_001618238.1); contains domain PRICHEXTENSN (PR01217) Range:  from: 11166538    to: 11167528    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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