Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------------->AtSPL8                                                     --------------->AtSPL3                                                     <---------------AtSPL3                                                     --------->ANAC58                                                     --------->ANAC58          --------->ANAC58                          --------->SPL7         ------->TEIL                             <---------SPL7        <---------DOF5.7(2)                      <------MYB46(1)       <---------WRKY38(1)                       <---------DEAR3(2)    <------MYB83 --------->WOX13(1)              <------MYB83    <------MYB46(1)                             --------->MYB46(2)    <---------MYB46(3)                          --------->MYB111(1)   --------->MYB111(2)                          <---------------AtSPL8   <---------AtMYB61--------->AHL20(2)          <---------AtMYB61   <---------MYB46(3)                           --------->MYB111(2)                --------->DEAR3(1)   --------->MYB46(2)                           <---------MYB46(3)                 ----------->HVH21   <---------DEAR3(1)                           <---------------AtSPL3           ------>ZmHOX2a(1)   --------->MYB111(1)                          --------->MYB59              <---------ALFIN1   --------->MYB55(2)<---------AHL20(2)        <---------MYB55(1)          <---------ATERF1(1)  -----  <--------P   --------->MYB46(3)              <--------P                ------>NtERF2          <----  <---------MYB55(1)<---------AHL20(2)  <----------DOF2  --------->SPL7 --------->ANAC46        ----- ----ZAT14--------->ANAC46              ----------------------->TaNAC69(2) <---------ALFIN1     <---- --->ZAT14--------->ANAC58     <---------ZAT6 <-------GAMYB        <-----------HVH21------>NtERF2   actggttggtgaacgtaaccaattaaatctatagagttcgcgattttgggttggtacggtacctccatcggtctcggccactcctccgacgatttctcag  11056700                          <---------RAP2.6(2)                     <---------------AtSPL3                   --------->LBD16                   ------>NtERF2                 <---------LBD16             ------>ZmHOX2a(1)                                                                 ------         <---------ALFIN1--------->SPL7  --------->LBD16                                  --------->HSFB2a(2)       ------>ZmHOX2a(1) --------->RAP2.6(3)                                        <---------ARR11(3) ---->ZAT2  <---------ALFIN1            <---------ANAC58                          <---------YAB1 -----At4g35610 ------>ZmHOX2a(1)       <---------ANAC46                ---------->DOF2   <---------HSFB2a(2) ---->At4g35610<---------ALFIN1         <---------ANAC58        <---------ANAC46  <---------ATHB12 -----ZAT2------>ZmHOX2a(1)         <----------DOF2       --------->ARR11(3)      --------->ICU4   ctctgtttcctcctcctcctccgcgagtacggctactactttccgtagaagaagttgaaagaaattgctgagaagaaagaacccatgattttctagcagt  11056800                                                     <---------ANAC58                                                 <----------DOF2                 <---------TOE1(3)                                        --------->ANAC46            <----------DOF2                                        --------->ANAC58      <-------TEIL  <----------DOF2           --------->ARR11(3)           --------->ANAC58     --------->CCA1(2)   <---------TOE2(3)           <---------ARR11(3)     ------>ZmHOX2a(2)  <---------ANAC55(2)   --------------->AGL15     <---------TOE2(3)          --------->ARR11(3)   <---------ANAC46      <---------------AGL15  <-- --->At4g35610                  <---------ARR11(3)   <---------ANAC58   <-----------GT1        ------   tgaatttaacgaaggtcttatcgatttcgaaattgatcttccaagaaactgcatttcgtgaagattcaaacttttagccttttagggtttatggggtttg  11056900                                                           --------->ARR14(2)                                                           <---------ARR14(2)    --------->At5g28300                              --------->GLK1(2)         <---------ANAC58         <------NtERF2                      <----------DOF2                   <---------ANAC58        --------->LBD16                   ------>NtERF2 <---------LBD16        <---------ANAC46       --------->ANAC46                  --------->ANAC58        ------------>CBF<---------MYB52(1)  <---------LBD16          ---------->DOF2    <---------GLK1(2)  --------->MYB52(1)           <---------ANAC46  *TSS---------->DOF2<---------DAG2    <-------TEIL    <------NtERF2         <---------ANAC58 --------ID1      --------->ANAC58 <---------TOE1(2)  --------->ABI4(2)      <---------ANAC58       < ----->HVH21      --------->ANAC46<---------LBD16     ------>NtERF2---------->DOF2                  <   acgacaaaaaaagaaagactacgcctttttagattctcgggttcgtcaataaacggtgccgtttcttcacaaagtcgtttcgcggcaaaaaactaaacga  11057000          ------------>CBF          --------->SPL7       <---------ANAC58                                                                        <-----       <---------ANAC46  --------->ANAC46                                                    --------       <---------ANAC58  --------->ANAC55(2)                                                ---------     <---------ANAC58    --------->ANAC58        <---------At4g35610           <-------GAMYB<--------     <---------ANAC46    --------->ANAC58    <---------O2            <----------DOF2        <--------     <---------ANAC58    <---------ANAC55(2) <---------bZIP60(2)    <---------ANAC58  *TSS  --------- ---------ANAC58  <---------ZAT18           <---------LBD16         <---------ANAC58  ----------->GT1 ---------ANAC58  --------->ZAT18         ----------->HVH21       ------->TEIL----------->GT1<-------   tgtcgtttcgcgtacaatagtgcccttacgaaacgatgctgtttttgacggggctgatttagaaaacgtagcttttgtgagggttattttgtaatttatt  11057100                              <------NtERF2                             ------>NtERF2                             <---------MYB46(3)                             --------->LBD16                            <---------ANAC46                           <---------LBD16                           <------NtERF2                        <---------LBD16                       <---------ANAC58                       <---------ANAC58                      --------->SPL7                     --------->ALFIN1             ---------->DOF2                    <---------SPL7            <------NtERF2 ----YAB1<-----------HVH21 ------>NtERF2     --------->LBD16 ->AHL20(2)        <---------ANAC58         <---------ANAC46 >AHL20(1)         <---------ANAC58        <------NtERF2                                ---------->DOF2 -AHL20(1)         <---------ANAC46       ------>NtERF2<---------GLK1(1)      ---------->DOF2       < -AHL20(2)         --------->DEAR3(1)    <---------DEAR3(1)                --------->TOE2(3)     <--- >AHL20(2)   <---------O2 <---------ATERF1(1)----------->GT1               --------->TOE1(3)     ---- --AHL20(2)  --------->O2<---------DEAR3(1)<---------LBD16              --------->GLK1(1)--------->DAG2   tttgtttagtttgtcacttcgccgtgcgcggcgggagagaacgctggcggaaaaaagaaatcggaaaactggagaaaccctaaatcgacgaaaaggagag  11057200                                                                                                   --                 <---------ANAC46                                                             -------                 <---------ANAC58                                                             -------           --------->HSFC1(2)                                                            <---------ALFIN1           <---------ZAT2                                                               --------->LBD16           <---------HSFC1(2)                                                          --------->ANAC58           --------->ZAT2                                                    --------->ARR11(3)    -- ----------DOF2  <---------ANAC58                                    <----------DOF2   --------->ANAC58 ------ARR11(3)<------MYB83           <---------WRKY38(1)      <-----------GT1 ------>ZmHOX2a(2)   <- ----->ARR11(3)<------MYB46(1)        <---------WRKY12  <-----------RAV1(2)  <---------ARR11(3)    --   acctttgaatcgaagcttggtgtgtttatactatgaagagtcaatggtctaattttcatcaggtttttcatctttctctgatcttagacccccaattccg  11057300                                                                            <---------ANAC58                                                                            <---------ANAC58 ------->MYB46(3)                                                           --------->ANAC55(2) -------->AtSPL3                                               ----------------------->TaNAC69(2) -------->AtSPL8                                           <---------ZAT2  <---------TOE2(3) ------->HSFC1(2)                     --------->ARR14(2)   <---------At4g35610 --------HSFC1(2)                     <---------ARR14(2)   --------->At4g35610 ------->HSFB2a(1)        <---------MYB52(1)        <----------DOF2       <-----------GT1   aaccatctctgattctattcccaaactcgttgtttttgcagattgggagaaactctttcttagctgcttctactgtttacgtttcaaacgaattcaactt  11057400                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                <-------GAMYB                                                                <---------ANAC58                                                        <---------------AGL15                                                        --------------->AGL15                                                       <---------ANAC58                                                       <-----------------AGL2                                                       <---------ANAC58                                      --------->HSFB2a(2)       <---------ANAC58                                      <---------HSFB2a(2)      <------MYB46(1)                          <---------HSFB2a(1)          <-----------------AG                          --------->HSFB2a(1)          <-----------------AGL3                          <---------HSFC1(2)  ----------->GT1  <------MYB83                          --------->HSFC1(2)<------ZmHOX2a(1) --------->MYB59  <---------YAB1   cttaaacacttctcttcttaatcgaagaagcttctgttttgcagaaggaggtaaattgcttaatttggttgtgtgttaattctaattgttcttgcatagt  11057500                                         <---------MYB46(3)                                     <---------AHL20(2)                                    <---------AHL20(2)                                <---------AtMYB61                                <---------AHL20(2)                             <---------TOE1(3)                       <---------HSFB2a(2)                                 <----------DOF2<---------MYB46(3)                       --------->HSFB2a(2)                   ----------->GT1   <---------TOE2(3)  ---   acatgaattggttcaagggtattgtctagatgattttttttatttgttgagaaacgaattgaatcgaaaaatatgagctttaagcttgatggtggtacaa  11057600  Previous    Next  AGI:  At1g31010.1    Description:  OSB4 (ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 4); single-stranded DNA binding. similar to OSB2/PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE9), single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G20010.1); similar to mitochondrial SBP40 [Solanum tuberosum] (GB:AAX34397.1); contains InterPro domain Primosome PriB/single-strand DNA-binding; (InterPro:IPR000424); contains InterPro domain Nucleic acid-binding, OB-fold (InterPro:IPR012340); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 11054712    to: 11056902    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g31020.1    Description:  ATO2 (Arabidopsis thioredoxin o2); thiol-disulfide exchange intermediate. similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1) [Arabidopsis thaliana] (TAIR:AT2G35010.2); similar to ATO1 (ARABIDOPSIS THIOREDOXIN O1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT2G35010.1); similar to putative thioredoxin [Pisum sativum] (GB:CAJ84246.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thio Range:  from: 11057086    to: 11058848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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