Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                          <---------WRKY18(1)                                                                                         --------->WRKY12                                          ----------->RAV1(2)                            ----------->HVH21                                          <---------At4g35610                          --------->TOE2(3)              --------->HSFB2a(2)     <---------------AGL15 ------>NtERF2           <---------ARR14(2)     <---------ARR11(3)            <---------ARR11(3)      --------->DEAR3(1)       --------->GLK1(2)     --------->ARR11(3)            --------->ARR11(3)   --------->ANAC46            --------->ARR14(2) ->DOF2------>ZmHOX2a(2)    --------->REM1(1)--------->At4g35610          --------->TOE2(3)    ------   gacttctgatcttcttctctaacttcaccttcaccaagttcttcatctggtgactctaacgcagcctctaagagagccttagcgagaatccttgacctat  11039600        ------>ZmHOX2a(1)                           <----------DOF2    --------->ARR14(2)                             <---------DAG2    <---------ARR14(2)                          <-----------GT1 -------->ZAT6                                <----------DOF2                                      -- ----->YAB1                                   <---------DAG2                                     ---- -----ATHB12                      --------->HSFB2a(2)                 ---------->DOF2<-----------GT1 >MYB83--------->TOE2(3)          <---------HSFB2a(2)               ----------------->AG  <----------DOF2 >MYB46(1)            --------->GLK1(1) <----------DOF2    <-----------HVH21   <----------DOF2 ------   caacactatcctcatcatcttcagaactctcttcttctgcaactttcactttacctttctctgtcaagtttccaaagaaggctttgtttactctttctct  11039700                                   --------->ANAC46                                   --------->ANAC58                                   --------->ANAC55(1)                                   <---------ANAC55(2)                                   --------->ANAC55(2)                                              -                                <---------REM1(2)                                              <-----   <---------DAG2    <---------ANAC58  --------->ARR14(2)     <---------ANAC46                <------   <----------DOF2   <---------ANAC58  --------->GLK1(2)      <---------ANAC58                <------ ----->TEIL          <---------ANAC46 <---------GLK1(2)       <---------ANAC58                <------ ----->ZAT14     <---------ANAC58  --------->ANAC58      --------->ATHB12                <---------DEAR3(1) --------->AtSPL8<---------ANAC58 <---------LBD16   <---------HSFB2a(1)               <---------GLK1(2)   gtaccctttatcccaagttgcttccttgggcttcttcacggaatctacattggaatcgtcgattgggtattgactactatcgaaaacagagtcgctgctt  11039800                                           <----------CDC5                                          --------->At4g35610                                          <---------At4g35610                                        --------->ZAT18                                        <------NtERF2                                        <---------ZAT14                                       <---------RAP2.3(1)                                       <---------ERF1                                      <---------DEAR3(1)                                      <---------RAP2.3(3)                                     --------->At4g35610                                     <---------At4g35610                                  <-------TEIL----------->GT1                                --------->ARR11(1)                                --------->ARR14(2)         <---------WOX13(1)     <---------GLK1(2)       --------->ATHB12         <---------ARR14(2)                                     <---------TOE2(1)      <---------YAB1          ----------->ARR10            <------NtERF2               <---------TOE1(1) ----->ZmHOX2a(2)       <-------TEIL ----------->RAV1(2) <---------DEAR3(1) --------->ATHB12 ----WOX13(1)        <---------DEAR3(2)<---------ATERF1(1)--------->LBD16 <----------DOF2 ---ANAC58           <------MYB46(1) <---------ZAT2      <---------ANAC46<---------ANAC58 ---ANAC46           <------MYB83--------->ARR14(1)     --------->At4g35610----------->HVH21 ---ANAC58         --------->ALFIN1<---------RAP2.6(2)  <---------LBD16  <---------ANAC58   ---------   gatccgtcttcattgatggaagtgggttcgtctagattcggctgcgctgagtaaaatcggcggagaaagttttgtgcttgatggggattacgaggtgttg  11039900                                            ---------->DOF2                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                        --------->CCA1(2)                                       -----                                       --------->AGP1                                           <----                                       <---------ARR11(3)                                       <----                                       --------->ARR11(3)                                   <-------TEIL                --------->At4g35610    >>>>>>>>>GATA-1                                  <------------           --------->MYB52(2)          >>>>>>>>>GATA-4                                  <------------           <---------ANAC58     --------->ANAC46                                  <---------LBD16           <---------ANAC58  --------->ARR14(2)                                   <---------HSFB2a(2)      <------NtERF2----------->GT1     >>>>>>>>>GATA-2                           ------>ZmHOX2a(2)    <---------DEAR3(1)       <---------ARR14(2)  <----------DOF2                <------ZmHOX2a(2) >ALFIN1<---------SPL7  --------->ICU4 >>>>>>>>>GATA-3                         --------->ARR11(3)   tcttcgtcgtcgttcgtgagatggaaattagtatacgtagagatctaaaagctttcatttttgtaacaatggcgaagtagcgatctcggagaagtacaga  11040000                                                                                                    <                                                                                                    <   --------->ANAC58        --------->LBD16                                                       <---   --------->ANAC58   <---------ANAC58                             ---------->DOF2             <----- ---->ARR14(2)        <---------ANAC58<---------TOE2(3)      ----------->GT1                <-------- -----ARR14(2)       --------->HSFC1(2)                     --------->ALFIN1           <---------ARR14(2) -----GLK1(2)        --------->HSFB2a(1)             <---------LBD16           <---------ICU4 <------NtERF2 ---AtSPL8           <---------HSFB2a(1)            <---------ANAC46       ------------>CBF --------- ---AtSPL3    *TSS   <---------HSFC1(2)       <---------TOE2(3)----------->HVH21       --------->ARR14(2)   tttgaacgaaatgtaacagaagaggcttccgagggttttagaggttttgatgttttggggaagtggtgacaaagtaactcaatattacagataggcccct  11040100                                              <---------ICU4                                              <-----------GT1 ----------DOF2                            <---------ICU4 ---------DAG2                            <---------AHL20(2) ------ALFIN1                             --------->AHL20(2) ----ALFIN1                               <---------YAB1---------->DOF2       <-------TEIL -ZAT18                      <----------DOF2 --------->ICU4          ----------->RAV1(1) >PCF2                  <---------MYB59  --------->AHL20(2)         <----------ID1      --------->YAB1   cactttttgacaaatccaacgtagtccctaactttgtattcgatataattactactagcaaagtagcaatacaacaaaaattcatactaatcgtatcaat  11040200                                                                                                    -                                                                                                  <--                                                                                       <---------ARR14(2)                                                                                       --------->GLK1(2)                                                                                       --------->ARR14(2)                                                     <---------AHL20(1)                ------->TEIL<-                                                     --------->AHL20(1)           <---------ANAC58---                        ----------->GT1              <---------ARR11(3)           <---------ANAC58<--             <---------ZAT6                          --------->ARR11(3)           <---------ANAC46---   tggagtttgaatatacagttaatggaaggaatattagtcaattttgttttggcaaaatattgaacaacatggtgcaaacattttgggtgaatctgtataa  11040300                                    <---------ARR11(3)                   <------ZmHOX2a(1) -------->YAB1                      --------->ARR11(3)               ---------->DOF2 -------AHL20(1)                ---------->DOF2          ------->GAMYB  <----------ID1 --------YAB1               <----------ID1              --------->MYB46(3) ------>AHL20(2)       ---------->DOF2                  <---------MYB55(2) -------AHL20(2)  --------->At4g35610                   <---------MYB52(2)                     ------ ------>AHL20(1)  <---------At4g35610      ------>ZmHOX2a(1)--------->AtMYB61                  <-----   tataatactttgatcaattcagaagaaaaggagacaaagttcttcctccaagtctccaacgaccaaaaaaaaaaaggactaaacttctgagaaaaaacat  11040400                                    <---------O2                                    --------->O2                                    <---------TGA1a                                    ==================bZIP_DOF                                    ---                                    ==================bZIP_DOF                                   <---                                    <---------At4g35610                                          <---      ------>ZmHOX2a(2)             --------->TGA1a                                              ----     <------ZmHOX2a(2)              --------->ZAT2                                               <---    <---------ARR11(3)              ----------->RAV1(2)                                          ----    --------->ARR11(3)              <---------ZAT2               --------->AHL20(2)     --------->AHL20(2)   <---------GLK1(1)                --------->At4g35610        ----------->GT1       --------->YAB1   --------->GLK1(1)  ----------->GT1               ----------->RAV1(1)             <------ZmHOX2a(2) --->ARR11(3)         --------->YAB1============================RAV                --------->ARR11(3) ----ARR11(3)   XXXXXXXXXXXXXXXXXXXX>MIR418---------->DOF2   ---------->DOF2       <---------ARR11(3)   ctctgagatccctaaacaatgtaatggtaaactaactcacctggctaaagaatacaacagatggaaagttaataacttaaaatcagatcataaattcagt  11040500  Previous    Next  AGI:  At1g30960.1    Description:  GTP-binding protein (ERG). Identical to GTP-binding protein ERG (ERG) [Arabidopsis Thaliana] (GB:O82653;GB:Q6DBE6); similar to GTP binding / RNA binding [Arabidopsis thaliana] (TAIR:AT5G66470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41934.1); contains InterPro domain K homology-like, alpha/beta (InterPro:IPR015946); contains InterPro domain K Homology, type 2; (InterPro:IPR004044); contains InterPro domain GTP-binding protein Era; (InterPro:IPR005662); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917); contains InterP Range:  from: 11037593    to: 11040014    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g30970.1    Description:  SUF4 (SUPPRESSOR OF FRIGIDA4); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor. similar to late embryogenesis abundant protein-related / LEA protein-related [Arabidopsis thaliana] (TAIR:AT3G19430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41935.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, BED-type predicted; (InterPro:IPR003656); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 11040262    to: 11043732    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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