Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                          --------->ARR11(3)                                    ----------->GT1                                 <---------O2                                 <---------ZAT2                      --------->ANAC55(2)   --------->DEAR3(2)            <---------At4g35610                 <---------ANAC55(2) <---------PCF5                 --------->MYB111(1)             ----------->GT1  ------->TEIL ----->DAG2                  <-----------HVH21                  <---------ZAT6--------->ANAC58 ---->DAG2                  <---------bZIP60(1)                <---------TOE1(3)<---------ALFIN1 ---->DOF2      --------->SPL7 <-----------RAV1(2)      <---------ANAC58      --------->ANAC46     <- >TOE2(3)   <---------------AtSPL8 --------->ALFIN1     <---------ANAC46      --------->ANAC58 <----- ------->AGL1   <-------TEIL--------->bZIP60(1)         <---------ANAC58   <---------SPL7    <-------   aggggaccgaagttttggtacgttgttctgaggtcaggtggtaagatcgcatattgtctcgtgctagggttacatatcgcacgcacttcatcgtcccact  11007800                                                                                               ------                                                                                               <-----                                                                                               <-----       ------>ZmHOX2a(2)                                                                      <------      --------->CCA1(2)                                                                       ------>NtERF2      <------ZmHOX2a(2)                                                                       <------     --------->ARR11(3)                                                                       <------     --------->ARR14(2)                                                                       <------     <---------ARR11(3)                                                                       <------     <---------ARR14(2)                                                                      <-------     --------->AGP1                                                                          <-------     <---------AGP1     --------->ARR11(3)                                                   <-------    <---------GLK1(1)   --------->AHL20(1)                                                  <-------- ---------DOF2          <---------AHL20(1)                                              --------->ARR14(2) ----ALFIN1       ----------->GT1      --------->YAB1                                   --------->GLK1(2) --ALFIN1----------->GT1<---------ARR11(3)     --------->REM1(1)   <----------DOF2      <---------ARR14(2)   cctttgagatctggataatagggaaatatatcaaactagaagcataactacaactgtttgggcttatgtctttggagaatttcatatgaaaatcggcggc  11007900    --------->ANAC46 --->ATERF1(1)                                                                         <---------bZIP60(2) ----At4g35610                                                                         --------->TGA1a -NtERF2                                                                               <---------TGA1a ---MYB46(3)                                                                           <---------ANAC58 ---ERF1                                                                               <---------ANAC46 ---ATERF1(1)                                                                          <---------O2 ---DEAR3(2)                                                                           --------->O2 ---RAP2.3(1)                                           --------->ANAC46               <---------ANAC58 --RAP2.6(2)                                      --------->At4g35610                 <-------------- --DEAR3(1)                               <------ZmHOX2a(1)                     --------->YAB1 --RAP2.3(2)                         <------ZmHOX2a(1)  <---------ALFIN1       <---------ATHB12 -LBD16--------->CCA1(2)           <---------TOE2(3)  <---------ALFIN1       --------->WOX13(1)    <-   tactacaagagacgacttccctagtgattctgaggctaaggagaggagaagaagctccactccccttcttgtacaatcccaatcaagagacgtggattag  11008000                                                                                       --------->MYB52(1)                                                                                     --------->TOE2(2)                                                                               <---------MYB52(2)                                                                               --------->ANAC58           --------->ALFIN1                                                    --------->ANAC58         <---------ANAC46     <---------ICU4                                 --------->MYB52(1)         --------->ALFIN1   <---------ARR11(3)                            --------->ANAC55(2)       --------->ZAT2       --------->ARR11(3)                            --------->ANAC55(1)     <-----------RAV1(2)   <---------GLK1(1)                              --------->ANAC58    <-----------------AGL1 --------->GLK1(1)  <---------ZAT18             --------->ANAC58  <--------  <---------WRKY18(1)<---------LBD16       --------->MYB52(1)             --------->ANAC46<------ZmHOX2a(1) ---------TaNAC69(2)--------->ALFIN1      <---------ATHB51     <---------CCA1(2)------->GAMYB -----ZmHOX2a(1)--------->MYB46(3) <----------ID1      <---------ALFIN1<---------REM1(2)<---------TOE2(3)   aggatgaccaggtgtggaacaactgggggaaatcttgacgacgaataatggactccctcactcccatagcttctacacgcaacgaaacctaaggattgat  11008100                                    <------NtERF2                                    --------->At4g35610                                   <---------ATERF1(1)                                   ------>NtERF2                                   <---------DEAR3(2)                                  <---------ATERF1(2)                 --------->YAB1                                  --------->ATERF1(2)            <---------WOX13(1)                                  <---------RAP2.6(2)--------->ARR14(3)                                  --------->RAP2.6(2)<---------ARR14(3)            ----------->GT1   --------->ANAC58              --------->ATERF1(1) --------->ARR11(3)         <----------DOF2   --------->ANAC46      <------ZmHOX2a(1)  <----------DOF2 <---------At4g35610<---------ANAC58   ---   --------->ANAC58    >>>>>>>GRF7<---------DEAR3(1) <---------ARR11(3)<---------AHL20(2)<-----------GT1 -WOX13(1)          <-----------HVH21       <---------DAG2  --------->At4g35610<---------ANAC58   <--   tttgcaggcaatctcgagagtatgtcaggaacagggccggctcaaactttttgaagaccttgtgctgatttataaaaattggctttagttaatactgttt  11008200                                                <------------CBF             --------------->AtSPL8     ----------->GT1        <---------ZAT14    --------->ATHB12         --------->ARR11(3)            ----------->GT1       --------------->AtSPL8 <--------P         <---------GLK1(2)           <------------CBF      --------->GLK1(2)      <---------MYB46(3)         <---------ARR11(3)    ----------->GT1<---------AHL20(2)             ------>ZmHOX2a(1)        <---------RVE1(1)  --------->TOE2(3)  --------->AHL20(1)            --------->TOE2(3) ------>AHL20(2)         <---------ARR11(3)   --------->AHL20(2) ------->TEIL------------>CBF <------ -------AHL20(2)   *TSS  --------->ARR11(3)  --------->AHL20(2)--------->ZAT14   <---------ATHB12   ttaattacagagatttttggaccctaaaatcttaagtaaaattggaaaaaaattgacagagactctgtacttaaaattcctcaatggttgctaaaacttt  11008300                                                                              ---------->DOF2                                     <---------YAB1                     --------->ARR11(3)                                --------------->AGL15    --------->ANAC58  --------->HSFB2a(2)                              -------->P                 --------->ANAC58  <---------HSFB2a(2)      -                    <---------AHL20(1)          ---------->DOF2        --------->At4g35610     ------                    <---------AHL20(2)   <---------AHL20(2)      ---------->DOF2               <----- ----DOF2           --------->AHL20(1)   --------->AHL20(2)    --------->TOE2(3)    <------ZmHOX2a(1)   tgcatttgttctatggctatattatattcagttaccagtataattaaactgaaaggcataagaaacctaaagaagctctcgaaagaggaacgaaggctac  11008400                                                                                   --------------->AGL15                                                                                 <<<<<<<<<TBF1                                                                           <---------At4g35610                                                                       --------->ARR14(2)                       ----------->GT1              --------->MYB46(3) <---------ARR14(2) -------->YAB1      <---------ANAC55(2)            -------->P       <---------ANAC46 --->ZAT14          --------->ANAC55(2)----------->HVH21            <---------ANAC58               -- ----ZAT14          ----------->GT1  --------->AtLEC2------->GAMYB  <---------ANAC58  <----------DOF2   agtgatactaagatgaatagtcaagtgataaaaatcgccatgtaacagagagcaaccatcttcaaaatttgcgtctctgcttcttcttcttttggtttta  11008500                                                                           <------NtERF2                                                                           --------->RAP2.3(1)                                                                          <---------ATERF1(1)                                                                          <---------ORA47(2)                                                                          <---------RAP2.3(1)               --------->ANAC46                           <---------ANAC55(2)               --------->ANAC58                       --------->GLK1(2)   <---------DEAR3(2)               --------->ANAC58                       --------->ARR11(3) <---------DEAR4(1)          --------->ANAC46                      --------->LBD16          <---------RRTF1(3)     --------->ARR14(2)                         ----------->GT1          <---------DREB2C(2)     <---------ARR14(2)                        --------->ANAC58          <---------DEAR3(1)  <---------ANAC58                             --------->ANAC46          <---------RAP2.3(3)  <---------ANAC46                             --------->ANAC58        <-----------HVH21  <---------ANAC58                       --------->AHL20(2)   --------->DAG2           ---------->DOF2 <---------TOE2(3)      <---------AHL20(2)    <---------LBD16---------->DOF2 ------>NtERF2    ------- --------->HVH21    --------->YAB1      <---------YAB1<---------ARR11(3)<---------ORA47(1)   --------   tttgacgtatacactgcaagaaacataatattgctgaagtttattatatacggaaaaatctcgtaaagttcaaggtcggcgctaacctataaagcccgag  11008600                                                                         <---------AHL20(1)                         --------->ANAC46                    --------->TOE1(3)                         <---------ANAC58        <---------ICU4          --------->AHL20(2)                         <---------ANAC58       --------->ICU4  --------->MYB52(1)                         --------->ANAC55(2)  <---------At4g35610        <---------AHL20(2)             ------->GAMYB   --------->MYB52(2) <---------YAB1  -------->P       <----------DOF2  <-------TEIL   <---------DAG2        <---------DAG2 -->LBD16   --------->MYB46(3)         <----------DOF2<---------YAB1<---------MYB52(1)   <---------ZAT6 ->LBD16  <-----------GT1<---------ANAC55(2)  --------->YAB1 --------->TOE2(3)<---------AHL20(2)   aaacatgggctttaaccatctaaatatacgtgagtttctcactttctctgatgattatgctaaccttaccggtattttattttatagattagtgttttct  11008700  Previous    Next  AGI:  At1g30921.1    Description:  pseudogene, hypothetical protein Range:  from: 11007093    to: 11008219    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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