Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                                <----                                                                        --------->ATHB12        -----                                                                       <---------ATHB12         -----                                                                       ----------->HVH21      -------                       --------->ICU4                             <------ZmHOX2a(2)          ------>MYB46(1)               <---------ICU4                                    --------->ARR14(2)         =========               --------->YAB1                    <----------ID1  <---------ARR14(2)         ---------              --------->ICU4          --------->ANAC58        --------->MYB46(3)            ---------              <---------ATHB12        --------->ANAC58      --------->MYB52(1)   ------->TEIL------>MYB83            --------->GLK1(1)         --------->ANAC46   --------->ANAC46   ----------->GT1--------->AtMYB61   ttatatggattcagaaatcatggcgattatgtctcagtacatgccattagagagccaaaacacaaccgatccaatgactggtgaatctcaacaccaacag  11000500     <-----------GT1 -----ZAT2 ------>RAV1(2)        <---------AHL20(2) -----At4g35610       --------->AHL20(2) ---->ZAT2            <---------AHL20(2) ---->At4g35610  <---------MYB59                                ---------->DOF2 -->MYB46(3)   ------>NtERF2 <---------ARR11(3)              --------->At4g35610 =======RAV --------->ZAT14  --------->ARR11(3)              <---------At4g35610             -------- -->RAV1(1) --------->At4g35610       --------->ICU4  ---------->DOF2            <----------DOF2 >MYB52(1)  <---------At4g35610     ---------->DOF2--------->TOE2(3) ----------->GT1   <---------AHL20(2)   ctgagattaacttctgcagcctaattttataaatcttgaaaagatgaaatttttcttaaagagagctaaagatgaaaaaatttctttgtttaatcttgaa  11000600                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                                 --------->CCA1(2)                                                                <---------ARR11(3)                              <----------DOF2                   --------->ARR11(3)                    <---------YAB1                            <---------TOE2(3)                    <---------AHL20(2)                        <---------YAB1                   ------                   --------->AHL20(2)              --------->CCA1(2)                        ---------      <----------DOF2    <-----------GT1          <---------ARR11(3)                       ---------- --->GT1         --------->ICU4     <---------YAB1--------->ARR11(3)  ---------->DOF2 ---------->DOF2   aaatacttctttttgggtcatttttattgactcttttcattcttgtagataagatatatgcattaagatttaaaaaggaaattgtattgaaagtggtaaa  11000700                                                                      --------->YAB1                                                                 <---------AHL20(2)                                         <---------ANAC46    <---------RVE1(1)                --------->At4g35610     <------MYB83         <---------CCA1(1)                <---------At4g35610     <------MYB46(1)     --------->ARR11(3)             <<<<<<<<<<WRKY43         <--------P            <---------ARR11(3)        <----------DOF2              <---------ANAC58      <------ZmHOX2a(1) --->WOX13(1)<<<<<<<<<<WRKY38        <---------ANAC58     ----------->GT1                <----------DOF2 >At5g28300  <<<<<<<<<<WRKY26       <---------MYB46(3)   <---------TOE2(3)   ---------->DOF2 ->GT1<----------DOF2               --------->ATHB12--------->ZAT6   <---------YAB1  <---------TOE2(3)   tcaaacagctctttggtcatctcatacagagaatgaattggttggggaaatgtaacagtaaggatatttttatcataaacaaagtttgaggctttaatag  11000800                                                                     <---------TOE1(3)                                                                   <---------WRKY38(1)                                                                   <---------WRKY45                                                                   <---------WRKY12                                                                *TSS<---------DOF5.7(2)                                                           --------->LBD16                                                          <---------HSFB2a(2)                                      <------------CBF    --------->HSFB2a(2)           >>>>>>>>>CBP60g           <---------ICU4      <---------LBD16                            <           >>>>>>>>>SARD1           <---------YAB1  --------->ARR11(3)          ---------->DOF2 <----   --------->TOE1(2)            --------->AHL20(1)  <---------ARR11(3) --------->TOE2(3)   ----------   --------->TOE2(2)      --------->YAB1--------->YAB1  <---------LBD16--------->TOE1(3)--------->CCA1(2)   aaaaacataagaaatttggggacataaatgaaaatatactaattgtaagattaagttcttcgggagaagtcaacgttagagaaaaagaagagatggagaa  11000900                           --------->ANAC58                           --------->ANAC58                           --------->LBD16                           ------>NtERF2                          --------->ATERF1(2)                          <---------ATERF1(2)                          --------->DEAR3(1)                         <------NtERF2                         <---------LBD16                         --------->ATERF1(1)                         --------->RAP2.3(1)                        ------>NtERF2                        <---------ATERF1(1)                        <---------RAP2.3(1)                       --------->DEAR3(1)                       <---------DEAR3(1)           <---------MYB46(3)          <---------MYB52(1)<------NtERF2         <-------GAMYB--------->ATERF1(1)                                       --------->YAB1       <------NtERF2 <---------ATERF1(1)                                        <---------ICU4    ---------->ID1<---------At5g28300                    --------------------->WRI1      <------ZmHOX2a(1)  <-----------RAV1(1)<-----------HVH21             <---------ARR14(2)          <---------ATHB12 ----------DOF2  <-----------GT1           ------>NtERF2 <----------DOF2  <------ZmHOX2a(2)        <- -----ARR14(2) <-----------HVH21  --------->ZAT14  --------->ARR14(2)     ======================HOX2a_HOX2a ->GT1------>NtERF2 --------->DEAR3(1)  --------->At4g35610         <-----------GT1  <---------ANAC46   tactttgtcgccgttgttgtcaccgtcgccggcaagtgaagtcgctgcgagagtatcgtctttgttcgtttatccgatcaaatcatgtcgaggaatttct  11001000                     --------->MYB52(1)                    <---------ALFIN1                   --------->MYB46(3)         <---------ZAT2         --------->ZAT2         <------NtERF2                        <---------HSFC1(1)                              <------         --------->At4g35610                  --------->HSFC1(1)                     ---------->ID1         <---------At4g35610                  --------->HSFB2a(2)                   <-----------GT1   <-----------RAV1(2)   <---------MYB52(1)   <---------HSFB2a(2)          <---------ARR14(2) <------ ----------HVH21   <---------MYB55(2)        <---------ANAC46              --------->ARR14(2)<-------   ctgtctcaggcagctctcactcccaccggtatcaacaaaaactagtttcgagaaaaatttctcattttttggtttcgaattcgatttttccttcttgggt  11001100                                                                                --------->WOX13(1)                                                                               <---------ICU4                                                                            --------->YAB1          <                                                                            <---------ICU4          <        <---------At4g35610           <-----------GT1      <-------GAMYB<-------TEIL                < ---ANAC58          <---------At4g35610    <---------CCA1(1)       <---------TOE1(3)               <- ---ANAC58          --------->At4g35610    <---------RVE1(1)       <---------TOE2(3)              <-- --TOE1(2)          ----------->RAV1(2)   --------->ARR11(3)<---------MYB52(1)<---------YAB1    <----   ttcatattagagctgtttcttcatctgggtttaagtcttcttacgatattttcgattagcccgttgtttaagggttcatcatcattcagtgagactcctt  11001200    <------MYB46(1)    <------MYB83   <---------MYB46(3)                                                               <---------GLK1(2)   --------->MYB55(2)                                                              <--------ATHB1 ------MYB46(1)                                                                    --------->YAB1 ------MYB83                                                                      --------->ICU4 ---------MYB46(3)                                          <---------WOX13(1)    <---------ATHB12 --------AtMYB61                                  <---------ANAC46     <---------At4g35610   -------- ------P              <---------ZAT6    ---------->DOF2   --------->ATHB12    ------>ZmHOX2a(1) -------RAV1(1)  <----------DOF2      ----------->HVH21  --------->ICU4--------->At4g35610  ---------   gttggtgggtctaagttgtctttagtgtgactctgagtctctgaaagttattaagtggaaagattgatttttgtgctgtcctcaatgattctctaaaagt  11001300                                                                                   <---------YAB1                             <---------ZAT14                                    --------->ICU4                        <---------ANAC55(1)                           <---------ZAT2                   --------->ATHB12                                   --------->At4g35610                   --------->YAB1                             --------->ICU4    <---------YAB1 ->DAG2           --------->ICU4                  <---------TOE2(3)   <---------At4g35610<---------ANAC46 ->DOF2          <---------WOX13(1)         ----------->GT1<---------YAB1    <---------YAB1   gtataagacttggaatgtgaatgattaagtgtgaagtaatccaaaacagtttaatgaagttgtcattgtgagagctgatgtgattattttggtgtgattt  11001400  Previous    Next  AGI:  At1g30900.1    Description:  vacuolar sorting receptor, putative. Identical to Vacuolar-sorting receptor 6 precursor (VSR6) [Arabidopsis Thaliana] (GB:Q9FYH7); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT4G20110.1); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G34940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41919.1); similar to Vacuolar-sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protein) (GB:P93484); similar to unnamed protein product [Vitis vinifera] (GB:CAO63969.1); con Range:  from: 10997256    to: 11000524    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g30910.1    Description:  molybdenum cofactor sulfurase family protein. similar to molybdenum cofactor sulfurase family protein [Arabidopsis thaliana] (TAIR:AT5G44720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41924.1); contains InterPro domain MOSC, N-terminal beta barrel (InterPro:IPR005303); contains InterPro domain Pyruvate kinase, beta-barrel-like (InterPro:IPR011037); contains InterPro domain Molybdenum cofactor sulphurase, C-terminal; (InterPro:IPR005302) Range:  from: 11000864    to: 11002917    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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