Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------>MYB83                                 ------>MYB46(1)                               --------->AtMYB61                              <---------HSFB2a(1)                              --------->HSFB2a(1)                            ------->GAMYB                           <------------MYB.PH3(2)                           <---------MYB111(2)                           --------->MYB46(3)                       <---------ARR11(3)                         <-----------GT1                     ------>ZmHOX2a(1)          <---------ANAC55(2) <---------HSFC1(2)       --------->ANAC58          --------->ANAC55(2) --------->HSFC1(2)   --------->MYB52(1) -------DOF2          <---------ZAT6             <---------MYB52(2) --------->ARR11(3)     ---------- ->DOF2  <-------TEIL ----------->GT1   --------->YAB1 --------->ANAC58               --------->ATHB12   ttttagagcgatacgtttctcttagagtaacaaccttcccaagagtaatgaactaacaagctccttcaaagatttcaactaaaatgaatgattcagttaa  10993700                  --------->TOE1(3)                 --------->At4g35610        --------->TOE2(3)     --------->GLK1(2)                      --------->TOE1(3)----------->GT1    <---------ARR14(2)                      <---------DAG2  --------------->AtSPL3    <---------GLK1(2)                   --------->DOF5.7(2) --------------->AtSPL8                 --    --------->ARR14(2)                  <---------MYB52(1)------>MYB46(1)    ----------->GT1 <------NtERF2 ->GT1   ---------->DOF2    <---------GLK1(2)             ------>MYB83  ---------->DOF2   <------ZmHOX2a(1)   atttcagattctaaagcttagcttaaattcgattcttcaagcgttaccttatctaaaaccaaatcgtacaaaatcaaagaggcaaatttagaggaggcat  10993800                                                            --------->HSFB2a(2)                                                            <---------------AGL15                                                            <---------HSFB2a(2)                                                            --------------->AGL15                                                  --------->ATERF1(1)                                                  <------NtERF2                 <---------ANAC58                                                 <---------ATERF1(1)       --------->ALFIN1    <-----                                                 <-----------HVH21      --------->GLK1(2)    <-------                            --------->At4g35610 <---------ANAC58        <---------ARR14(2) ----------                <---------ZAT14<-------TEIL<------ZmHOX2a(1)--------->TOE2(3)   <---------ANAC58          <------NtERF2  <------NtERF2  --------->At4g35610----------------->AGL3      <---------ARR14(2)        <---------DEAR3(1)  <---------At4g35610 <---------DEAR3(1) ----------->GT1 <---------WRKY18(1)    <---------YAB1  --------->ALFIN1  <-----------RAV1(2)  ----------------->AGL1<----------DOF2  <-- ------->ZAT6<-------GAMYB<-----------RAV1(2)   <---------ANAC58--------->MYB52(1)----------->HVH21   accactatcgttggcgattgtagtggaggcagatgcagactcagaggaaggcgtcgcaacttccataaacggagaaactggggcttgacgaactggtaac  10993900                                       <------NtERF2                                     <---------ANAC58                                     <---------ANAC58                                     <---------RAP2.6(2)                                     <---------ANAC46                               --------->ARR14(2)                              <------NtERF2                            <---------ANAC46                           <------NtERF2                          <---------RAP2.3(1)                         <---------RAP2.6(2)   --------->At4g35610   <---------RRTF1(3)   --------->ZAT2        <---------RAP2.3(2)   <---------At4g35610   <---------DEAR3(1) ----HSFC1(2)<---------DEAR3(1)<---------ARR14(2)           --------->ATHB12 -P<---------ZAT2        <---------RRTF1(2)                 <---------ICU4 ->GT1     --------->ALFIN1<---------LBD16                <---------WOX13(1) -------LBD16<---------RAP2.6(2)    ---------->ID1   <---------ZAT6                  <---------YAB1   ttcggagcagcgagtgcggcttcaatagcggcggatttggcgtcttctctcgttagagtgaatgattccttctccactatttctcttcttattgctctca  10994000                                                   --------->CCA1(2)                <---------AHL20(2)                                                  <---------ARR14(2)           ----------->GT1                       --------->ATHB12         ----------->ARR10           --------->DAG2                <---------At4g35610      <---------ANAC58                  --------->DAG2               ------->TEIL              <---------ANAC58            <---------TOE2(3)    <-----------GT1  <---------WOX13(1)<---------YAB1   <---------GLK1(1) ---------->DOF2     <------   atctcttcaccctcttgcatctcattgatttcgccattgttgtgcttggggagatttgaaatcagggttttgaggcaaaaggggttttaatttctgcgtc  10994100                                                               <---------ANAC46                                                               <---------ANAC55(2)                                                          <------MYB46(1)                                  ---------->DOF2         <------MYB83                              <------ZmHOX2a(1)           <---------MYB46(3)                        <------------CBF               <---------MYB52(1)                       ------>MYB83                  <---------YAB1             ------>ZmHOX2a(1)                       ------>MYB46(1)            <---------ARR14(2) --------->AHL20(2)                     --------->TOE2(3)            --------->ARR14(2) <---------AHL20(2)       --------->YAB1--------------->AGL15      --------->LBD16--------->ANAC55(2)                ---      *TSS---------->DOF2   <---------TOE2(3) <---------LBD16  <---------ANAC55(1) ----------------->AGL3    <----------DOF2  <---------MYB59    <------------CBF --------->MYB59    ------->TEIL          <-- -----HVH21          ================================================================================MADS_MADS   ggacttcttttataaagtctaaacctaattgaggaacaaaggaattgctccggttctgtttggttacgagtttaaatgtatcctatccaagtttagagcc  10994200          <------------CBF         --------->ATHB51         -------->ATHB1         <---------ICU4                                                                       =======         --------->ATHB12                                                                     <------ZmHOX2a(2)        <---------AHL20(2)                                                                   <-------        <---------ATHB51                                                                    ---------        <---------YAB1                                                                      <--------        --------->ICU4           <---------AHL20(2)                                      <---------ZAT14        --------->AHL20(1)      --------->AHL20(2)                                    <---------ANAC58  ----------->GT1      --------->MYB59                                                <---------ANAC58 ------>ARR14(2)------------>CBF<---------AHL20(2)                    <-----------GT1 <---------ANAC46 -------ARR14(2)<-----------------AGL1                              --------->YAB1 <---------DEAR3(1)   tattcggaaaattattggcccaatttaggcccaaataaatagagaagaacgcttcgaatggaaaacccgataatacccttcttcgtctgcgtgcagatca  10994300                               <---------------AGL15                               --------------->AGL15                              ----------------->AGL2                              ----------------->AGL1                              ----------------->AGL3                    >>>>>>>>>>>>>>>>>LFY                   --------->ARR14(2)  *TSS <---------GLK1(1)    <-----------GT1                                                     ----- =====================HOX2a_HOX2a                                                             <------ --ARR11(3)        --------->GLK1(2)                                  <---------At4g35610  --------->LBD16 >At4g35610        <---------ARR14(2)                            <----------DOF2  <----------DOF2 -At4g35610    <------ZmHOX2a(1)                   <----------DOF2    --------->At4g35610<---------LBD16   cactgtttgatttctgaggagaatccattgtttccatttgaagaaaactctaactttctcgttgaagctttgagctctctacctctttatctccgggtta  10994400                                                                                              <------                    <---------MYB46(3)                                                     ----------              --------->ARR14(2)                                                      ------>ZmHOX2a(2)           --------->ALFIN1                                                          <------ZmHOX2a(2)         <---------ANAC46                                                           --------->ARR11(3)       <---------ANAC46                                                             --------->ARR14(2)       <---------ANAC58                                                             <---------ARR11(3)       <------MYB83 --------->MYB52(2)                                              <-----------ARR10       <------MYB46(1)                                                              <---------ARR14(2)       <---------ANAC58                                    <---------MYB46(3)       --------->AGP1  --------->ATHB12<---------MYB52(1)              <---------ANAC58                  <---------AGP1 <---------YAB1 ------>ZmHOX2a(2)                 <---------ANAC58                 <---------CCA1(2) ---->MYB52(2)<---------ARR14(2)                  <---------ANAC46             --------->GLK1(2) --P  <---------AtMYB61       <-----------GT1<----------DOF2        --------->HSFB2a(2)<----------DOF2   gttttgatttggtgtggatcggtagtggaattttgctcttcgtcttgctatttcgtatgcgttgttgtttctcgattagcgaatcagatctttgttcttt  10994500                                                                                            <--------                                                                                           <---------ANAC58                                       <---------ANAC58                          ------>ZmHOX2a(2)                           <---------TOE1(3)                                     <-----------------AGL2                           <---------TOE2(3)                                    <------ZmHOX2a(2)                      --------->ARR11(3)                                       <---------ARR11(3)                      <---------ARR11(3)   <---------ZAT6                      --------->AGP1   <----                <---------YAB1         <---------ANAC58                        --------->ARR11(3)<--- ----DOF2 <---------AHL20(2)          --------->ATHB12                         <---------AGP1   <---- >ID1     --------->AHL20(2)        <---------WOX13(1)                    --------->YAB1   <---------ANAC58   tgttagatttgataaatttcgatagattttaggtttggattgattgtgttattgaacttgaatgcttctggttgaatcatagatctagttttggctttgc  10994600  Previous    Next  AGI:  At1g30880.1    Description:  unknown protein Range:  from: 10993176    to: 10994106    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g30890.1    Description:  integral membrane HRF1 family protein. similar to integral membrane HRF1 family protein [Arabidopsis thaliana] (TAIR:AT3G59500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64820.1); contains InterPro domain Hrf1 (InterPro:IPR005578) Range:  from: 10994302    to: 10996115    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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