Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <----------DOF2                                                        <---------DAG2--------->HSFB2a(2)                                                     <-----------GT1  <---------HSFB2a(2)                                                     <---------AHL20(2)                    <---------ALFIN1                       --------->MYB52(1)        <------------------------ANAC81           ---------- -------->GT1         <---------AHL20(2)  <---------ANAC58       <----------DOF2   <-----------GT1 ----->DOF2           --------->AHL20(2)  <---------ANAC58    <-----------GT1 <----------DOF2   aagttaaactgaatttgaaaacaattaatggcacaatgttctgtgcttatgttattaacttttttttcttttccaaaacccttttgtacttccccacata  10966500                                                                                         <-----------ARR10                                                                                         --------->ARR14(2)                                                                                   <---------ARR11(3)     --------->WOX13(1)          <-----------GT1                        <---------ANAC58 <---------ARR11(1) <-----------GT1         ---------->ID1          <-----------RAV1(1)    <---------ANAC58 <---------ARR11(3) ->RAV1(1)           <----------DOF2        <---------ICU4           <---------WOX13(1) <---------CCA1(2)   tttctaccaattacacttgttaactttgttttttttttctacttcataattttgttgttgttcagagtcagattgcttcttccaatatccatatctaagt  10966600                                                        <---------YAB1                 --------->YAB1               --------->YAB1                         ----------->GT1                  <---------ICU4           <---------AHL20(2)                      <---------GLK1(2)----------->GT1   --------->ICU4          <---------AHL20(2)                       --------->ARR14(2)          --------->CCA1(2)          --------->AHL20(2)                       <---------ARR14(2)         --------->ARR14(2)      --------->AHL20(2)                 --------->CCA1(2)  --------->YAB1    --------->ARR11(1)      <---------AHL20(2)                <---------ARR11(3) --------->ICU4     <---------GLK1(2)     -    --------->TOE2(3)                   --------->ARR14(2) <---------YAB1   ----------->ARR10     ---   tatctacattaattaaatgataaacttttaaactaacttcaagatttgaaacagatttgttattatcaaatagtgaaatagatttgcaatattgactatg  10966700                            <---------TOE2(3)                      --------->ARR11(3)                      <---------ARR11(3)                      <---------AHL20(1)                      --------->AHL20(1)                      <---------AHL20(2)                      --------->AHL20(2)                   --------->AHL20(2)                  <---------AHL20(2)                                      <---------AHL20(2)      <--              <---------AHL20(2)                                 <-----------GT1                  ---              --------->AHL20(2)                 <---------------AGL15    --------->AHL20(2)      ---            --------->TOE2(3)            <----------DOF2      --------------->AtSPL8         -------- ---------->GT1   --------->AHL20(2)   ---------->ID1     <---------RVE1(1)            <----------DOF2 ---->TEIL  --------->YAB1 ---------->DOF2   <-----------GT1  <---------AHL20(2)       ------>ZmHOX2a(1)   tatgtttaaaacaatattaattaatatattaaagtttttttgtctttaaacctattagaggtattttataccatatttaaaatttcatccttttcaacaa  10966800               --------->AHL20(1)               <---------AHL20(1)               --------->AHL20(2)                                                                   <        <---------AHL20(2)               -------->HAHB4                                           ---    <---------AHL20(2)                   --------->YAB1                                     ------>ZmHOX2a(2)   --------->AHL20(1)                   <---------YAB1                                     --------->GLK1(1)   <---------AHL20(1)                 --------->YAB1                                       <---------GLK1(1)  <---------AHL20(2)        <---------AHL20(2)                      --------->ANAC46      <---------ARR11(3) -------AHL20(2)           <---------AHL20(1)             --------->ANAC58                ------->TEIL ------>AHL20(2)  <---------AHL20(2) --------->AHL20(2)   --------->ANAC58                <---------AGP1 ------>YAB1--------->YAB1 --------->AHL20(2)           ---------->DOF2   <------------CBF--------->ARR11(3) ---->CBF  <---------YAB1  <---------AHL20(2)   <---------ANAC46  --------->ZAT6        *TSS=========   ttatatatattttatgatatattatctaataaaattcaaataataatactccttgtacaaaagccataacactccccattgctcatgcgatggatctctc  10966900                                                      --------------->AGL15                                                     <-----------------AGL1                                                 <---------AHL20(2)                                              <---------AHL20(1)                                              --------->AHL20(1)                                        --------->YAB1<---------------AGL15                           <---------DAG2  --------->YAB1                            ---------->DOF2 <-------GAMYB<---------ATHB12         <---------AHL20(2)                        ----------->GT1 -----------RAV1(1)        <----------DOF2 --------->AHL20(2)          <---------TOE2(3)     <-------TEIL --->ZmHOX2a(1)      --------->YAB1   --------->AHL20(2)               <---------TOE1(3)    --------- ====HOX2a_HOX2a    <---------YAB1    <---------AHL20(2)         <----------DOF2 <---------ANAC46   ctctgttgatggtccaacgattttcatagctttttttttttttaataatattttttctcaaaatgggctttttaaggctgatggagtaaaagagatacat  10967000                                                                                         ------>ZmHOX2a(2)                                                                                         <-----------                                                                                        --------->CCA1(2)                                                                                        <------ZmHOX2a(2)                                                                                        --------->ARR14(1)                                                                                       <---------ARR11(3)                                                                                  ------>MYB83                                                                       ------->TEIL    --------->ARR14(2)                                                                    --------->ANAC58   --------->AGP1                                                                    --------->ANAC58   <---------ARR14(2)                                                                 <---------ARR14(2) --------->HSFB2a(2)                                                                 --------->ARR14(2) <---------HSFB2a(2)                ----------------->AGL2                         --------->LBD16    ------>MYB46(1)                <-----------------AGL1                       <---------LBD16 <---------ALFIN1      ---------->DOF2                                     --------->ZAT14 --------->WOX13(1) >CCA1(2)       ----------------->AGL1                    <---------ZAT14--------->MYB46(3)   gaatacaaaaaagagaggtccaaaatgggaaccctagaaaacaaactctgaagaagacagtacaccggaaacgcatccatcaccttccagatccgatgct  10967100                      --------->ANAC58                  ------>NtERF2                                   <---------MYB52(1)                 --------->LBD16                             <---------ALFIN1                <---------ANAC46                         <-----------ARR10                <---------ANAC58                         --------->ARR14(2)                <---------ANAC58                         <---------ARR14(2)   ------>NtERF2           --------->ATHB12                             --------->GLK1(1)    --------->DEAR3(1)          --------->AHL20(1)                            <---------GLK1(1)   <------NtERF2          <---------AHL20(1)                        --------->ANAC58       ------>NtERF2          <---------AHL20(2)                        --------->ANAC58    <-----------HVH21          --------->AHL20(2)                     --------->At4g35610   <-----------RAV1(1)        ------->TEIL  --------->ANAC58           --------->ZAT2  --------->At5g28300 ----------WRI1<---------LBD16                 <------ZmHOX2a(1)----------->GT1   aacaaggatgaatttattgcggacaagactcgaagacaaacctttgggaggagctagcaaatcccaccgtaaattgtcgccgagagacttatccgaacca  10967200                            --------->AtMYB61                         <---------ALFIN1                        --------->MYB46(3)                --------->DAG2              ---------->DOF2               <---------ARR14(2)--------->ANAC58           <---------HSFB2a(2)    ------->GAMYB         --------->LBD16                     ---------           --------->HSFB2a(2)--------->MYB46(3)       --------->ANAC46                   <----------DOF2          <---------LBD16--------->AtMYB61  <---------GLK1(2) --------->ANAC46           --------->TOE2(3)          <---------ANAC46  <---------ALFIN1--------->ARR14(2)--------->ANAC58           --------->TOE1(3)       <----------DOF2<---------PCF5     <---------HSFB2a(2)---------->DOF2            -------->P      <---------DAG2  <------ZmHOX2a(1)  --------->HSFB2a(2)--------->MYB46(3)      <---------MYB52(2)   aaaacaaacctttcgggaaagggaggaccaccacaaccgagacccagaacctcttctccccaacaagcaagaagagagacatcaaaactaacctttaatt  10967300                                               ----------->RAV1(1)                                              <---------ETT(1)                                              ----------->HVH21                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                            ===================HOX2a_HOX2a                                            --------->CCA1(2)                                ------->GAMYB==================HOX2a_HOX2a                                --------->AtMYB61                       <------NtERF2                                <---------ALFIN1                       --------->LBD16                 <---------ALFIN1          --------->ARR14(2)        <---------LBD16                 --------->AtMYB61         --------->AGP1 --------->ANAC58                --------->MYB46(3)<---------ALFIN1        --------->ANAC58  <---------AHL20(2)       ------->TEIL            --------->MYB46(3) ---------->DOF2  --------->ANAC46  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------ARR14(2)   <---------ARR14(2)  <---------MYB46(3) --------->DEAR3(1)--------->ANAC46   <-----------HVH21 <------ZmHOX2a(1)   --------->AHL20(2)     >> >AHL20(2)    <-----------GT1 -------->P  <---------At4g35610   --------->ARR14(2) ------->TEIL <----   ccaccgatgaacctttgaaccactccaagagcaaccacaccttcagatccgacaaagaggaagccaaatacggcggaataaaatggatgttggctcaaac  10967400  Previous    Next  AGI:  At1g30835.1    Description:  transposable element gene Range:  from: 10966888    to: 10968832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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