Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------DAG2                  <----------DOF2         --------->YAB1       --------->AHL20(2)       --------->AHL20(1)       <---------AHL20(1)      --------->YAB1   <---------AHL20(2)  --------->AHL20(2)  <---------AHL20(2) ->AHL20(1) --------->YAB1 --AHL20(2) <---------ICU4 ->AHL20(2) -------->HAHB4                     ----------->RAV1(1)                         <---------TOE2(2) >AHL20(2) --------->ICU4                     <----------ID1            ----------->GT1    <---------TOE1(2) -ATHB12<---------YAB1                     --------->DAG2  <---------ARR14(2)           <---------ANAC58 -AHL20(2)<---------AHL20(2)              ---------->DOF2  --------->ARR14(2)           <---------ANAC58 -ATHB51<---------AHL20(2)        --------->ZAT6      <-----------HVH21 <---------ZAT6  <---------ANAC46   tgaattaaatataataatgactttttcttcgaactcacagtacataaggcaacaagtgtcagatttgatgcatagagataatagcatttttcgtagtttt  10917900                                                        ----------->GT1                                                       ------>ZmHOX2a(2)                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                   <-----------GT1                                         <---------GLK1(2)          ------>ZmHOX2a(2)     <---------At4g35610            <---------YAB1  <<<<<<<<<SARD1<---------RVE1(1)       --------->ARR14(2)      --------->At4g35610          --------->YAB1    <<<<<<<<<CBP60g    <-----------GT1    <---------ARR14(2) <----------DOF2<   tgttaaatataagtataatacaacattccaaatttctattacagatttttaactggatcggataattagatcggcatatttttcaagctttcagcaaaaa  10918000                                                       <-----------GT1                                                    <---------ARR11(3)                                           --------->ARR11(3)                                           <---------ARR11(3)                <---------AHL20(2)         <---------ARR14(2)              <---------YAB1              <------ZmHOX2a(1)--------->ANAC58            --------->AHL20(2)          <---------TOE1(3)  --------->ANAC46                       <--            <---------AHL20(2)          <---------TOE2(3)  --------->ANAC58     ---------->DOF2 -----           <---------AHL20(2) --------->ATHB12      --------->ARR11(3)   --------->DAG2    <---------AHL20(2) ------ZmHOX2a(2)            --------->ICU4--------->ARR14(2)          ---------->DOF2     --------->AHL20(2)   cgatcaccctaaaattattttttttgatggaatgatttgtttgaggatattgaatatatacactccaattccaaaaaggctataaagtatgaattaaaca  10918100                       <--------ATHB1                       -------->HAHB4                       --------->ATHB12                       <---------ICU4                      <---------YAB1                      <---------ATHB12                                                    --------->TOE2(3)                      --------->ICU4               --------->ZAT6                   <---------ICU4                     <---------TOE2(3)       <---------ICU4                   <---------ANAC46      <                    --------->YAB1          <---------ATHB51                  <---------ANAC55(2)   <                  <---------YAB1            --------->AHL20(2)                --------->ANAC55(2)   <                <---------ICU4              <---------AHL20(2)                <---------bZIP60(1)   <                --------->ATHB51            --------->ICU4                    ----------->GT1       -                <--------HAHB4         ----------->GT1                      <---------TGA2(2)   <---- -------ATHB12 --------->ICU4        ---------->DOF2 --------->ANAC46      ----------->TGA1     <---- ---->WOX13(1) <---------YAB1     ----------->GT1<-----------GT1   ---------->DOF2 --------->ICU4   <   atcaagtagtaatagccattattaatgattcgaaaatggtaaagaaataattaacactaaacaagagtcaaaagaacatgacgtaaatattacatcaact  10918200      <-----------GT1                    <-------TEIL ---------ANAC58                    <---------ALFIN1 ---------ANAC55(1)               ------>MYB46(1) ---------ANAC58                  ------>MYB83              ------->GAMYB                   --------- ---------ANAC46                  ----------->RAV1(1)       *TSS                            --------- -------->ANAC55(2)              --------->ANAC46          --------->MYB46(3)               --------- -----DAG2                     --------->ANAC46            <---------MYB52(2)              ------->GAMYB ------DOF2                  <-----------GT1           ------>ZmHOX2a(1)       --------->MYB46(3) ---------ANAC55(2)        <---------AHL20(2)    ------->TEIL               --------->MYB46(3)    <--   ttacgtataaaccccttccctctctctatttaaacccaacacatacatatgaaactcctcaacaaacacaaaaacctcacaaccactaaacaacacacaa  10918300                                          --------->ANAC58                                          --------->ANAC58     <-------GAMYB                        --------->ZAT6   <---------ANAC58                <---------ANAC58   <---------ANAC58                <---------ANAC46   <---------ANAC46                <---------ANAC58 >ANAC58                         --------->ARR14(2) >ANAC46              --------->ZAT6    <-----------GT1          <-----------GT1 >ANAC58      <---------TOE2(3)  <---------ARR14(2)         <----------DOF2    <----------DOF2 -------ICU4--------->ICU4      <---------CCA1(2)  <-----------GT1    >>>>>>>>>>>>>>>>>LFY   aaatggcgtttgtattaatgaataacacaaacgcgtttcttgtaacgctactattactatccctttcttacattccattgtctttttccacaatccaaca  10918400                               --------->HSFB2a(1)                               <---------HSFB2a(1)                               <---------HSFC1(2)                          --------->ANAC58                               --------->HSFC1(2)                          --------->ANAC58                            ------>NtERF2                             <---------MYB59================                  --------->ETT(2)        --------------------->WRI1  --------->AtMYB61  <-----------GT1                  <---------ETT(2)   <----------DOF2              --------->ANAC58   <----------DOF2        <---------bZIP60(2)----------->HVH21                      --------->ANAC58  --------->TOE2(3)        <---------ANAC46   --------->DEAR3(1)              --------->ZAT14 --------->ANAC46   agacttcgtgatgtgtctagtcgacaactccgacgcttcctttccaatggactcatcgttcttcactcacgacctaaacgcctcttcctttaaactcgcc  10918500                --------->ARR11(3)                                                           <-------               <---------GLK1(2)                                                         --------->ANAC46         --------->At4g35610                                                        ------->MYC2         <---------At4g35610                                                        <-------PIF5         <---------ZAT2                                                             ------->MYC3         --------->ZAT2                                                             <-------MYC2      --------->TGA2(2)                                                             ------->PIF5     <-----------HVH21                                                              <-------MYC4     <-----------TGA1                                                              --------->ANAC58    --------->ANAC58                                                               --------->ANAC58    <---------TGA2(1)     --------->ANAC55(2)                                     ------->TEIL<------NtERF2    --------->bZIP60(2)   <---------ANAC58                                        <---------TOE1(2)    <---------bZIP60(1)   <---------ANAC55(2)                                     <---------TOE2(2)    --------->ANAC58      <---------ANAC58                                   ---------->DOF2 <------NtERF2    --------->TGA2(1)    --------->MYB52(2)                               --------->ANAC58  ---------    --------->bZIP60(1)<---------MYB52(1)              <-------TEIL       --------->ANAC58  ---------    ==========================MYC_MYB         --------->ANAC58            --------->ANAC55(2)------>NtERF2    <---------TGA1a    <<<<<<<<<MYB98         --------->ANAC46            --------->ANAC46  <--------    --------->O2<---------ARR11(3)            --------->ANAC58        <---------DAG2<-------MYC3    <    <---------O2<-----------ARR10           ------>ZmHOX2a(1)         <----------DOF2<-----------HVH21    --------->TGA1a   <-----------HVH21    --------->TOE2(3)       --------->RAP2.3(2)<-------TEIL --   <-----------STF1  --------->ANAC46   <---------ARR14(2)    <---------ANAC58 --------->ANAC58  <--- =============bZIP_DOF<-------GAMYB     --------->ARR14(2)    <---------ANAC58 --------->ANAC58------   ttagagacgtcagctcaaaatctccgttacttgatgccttcaaatcctaagccagagttcattttcgagccgctttacgaaacgcacgttcaggccgccg  10918600     ------>NtERF2    --------->ANAC46                                                                 --------->MYB52(1)    <----------ID1                                                         <---------ANAC46 --ATERF1(1)                                                              --------->HSFB2a(2) >DEAR3(1)   --------->At4g35610           <---------AtMYB61              <---------HSFB2a(2) >RAP2.6(2) --------->GLK1(2)           --------->ALFIN1                  <---------LBD16           - -DEAR3(1)---------->DOF2      <-------GAMYB<---------MYB46(3)        --------->ANAC55(2)       <---- ----------DOF2               <---------MYB46(3) <---------YAB1       <---------ANAC58      <-------GAMYB ------->MYB52(2)            <---------ANAC46    --------->ICU4       <---------ANAC55(1) <---------ANAC46 ------MYB52(1)             <---------LBD16--------->ALFIN1           <---------ANAC58    <---------ANAC58 --->DEAR3(1)<---------At4g35610        <---------DEAR3(1)            <---------ANAC55(2) <---------ANAC58   ttctttgcgccaagaagctgaagcttcacttgcggttaagaagcggtggtcatgactacgaaggcctctcttacgtctcggagatggaaacggcgtttgt  10918700                                                            <-------TEIL                                                         <---------DEAR3(2)                                                       --------->ALFIN1                                                      ------->PIF5                                                      ------->MYC2                                                      ------->MYC3                                                      <-------MYC3                                                      <-------MYC2                                                      <-------PIF5                                                     --------->ALFIN1                                                     <---------ANAC46                          <------ZmHOX2a(2)          <---------ANAC58                          --------->ZAT14            <---------ANAC58                             >>>               --------->ZAT2                  ---------->DOF2 --------->ANAC46           <---------YAB1 ----->ZmHOX2a(2)         <---------ZAT14---------->DOF2<---------TOE1(2)           ----------->GT1 -----YAB1     <---------ZAT2 <---------ZAT6  --------->MYB52(1)       <-----------------AGL3  ------   gatcgtcgacttgtccaagcttagacagatcagtgttgatatagaaagtaacagcgcgtgggttcacgctggtgcttctattggagaggtttattacagg  10918800  Previous    Next  AGI:  At1g30760.1    Description:  FAD-binding domain-containing protein. similar to EDA28/MEE23 (MATERNAL EFFECT EMBRYO ARREST 23), electron carrier [Arabidopsis thaliana] (TAIR:AT2G34790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81654.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42589.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 10918260    to: 10920659    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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