Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <-----------ARR10                                           <---------RVE1(1)           <---------AHL20(2)                                           <---------CCA1(1)           --------->AHL20(2)                                ---------->DOF2                    <---------RVE1(1)                            --------->ANAC58                      <---------ARR11(3)                            --------->ANAC58                      <---------GLK1(2)                           --------->DAG2 <---------GLK1(2)       --------->ARR11(3)        ---------                          ---------->DOF2 --------->ARR11(3) --------->TOE2(2)   --------->GLK1(2) ----->DOF2    >>>>>>>>>>>>WRKY18         <---------ARR11(3) --------->TOE1(2)  <---------GLK1(2)   aagagatagcattcttgacatttgacaaaaaagcaaaagcagaagattttttagtttagaaaacataagatttttaattagagaatctatacaatcttca  10894900                                                                   <-------TEIL                                                       ------>NtERF2                                                       --------->LBD16           --------->ANAC58                                                      <---------LBD16         <------ZmHOX2a(2)                                                      <---------ETT(1)--------->At4g35610                                                     <---------LBD16  <---------At4g35610               ------>ZmHOX2a(2)                   <-----------GT1--------->CCA1(2)              <------ZmHOX2a(2)              <---------AHL20(2)  --------->ARR14(2)             <---------ARR14(2)            <---------AHL20(2)   <------ZmHOX2a(1)--------->ANAC58             --------->ARR11(3)           --------->AHL20(1)    =====================HOX2a_HOX2a             <---------ARR11(3)           <---------AHL20(1) --------->DAG2  <---------ARR11(3)  ----    ------->TEIL                         <---------AHL20(2) ---------->DOF2  --------->ARR11(3)  ---- >YAB1       --------->ARR14(2) <----------DOF2<---------AHL20(2)<---------ARR14(2)             <----   atattgaatctatacgatcttcaaaaattcaagtctttcttatatatattttttttccggcaaaaaggatacagatgaagatcatgccatttgttttaga  10895000                                                                                 ====================                                                                                 --------------->AGL15                                                                                 <---------------AGL15                                                                                ----------------->AGL2                                                                            ------->TEIL                                                                 --------->CCA1(2)                                                                <---------ARR14(2)                                                      ----------->TBP    <---------YAB1                                                    <-----------TBP    --------->CCA1(2)            <---------TOE2(3)             <---------AHL20(2)    --------->ARR14(2)     --------->YAB1           ---------->DOF2          ----------->GT1 --------->AHL20(2)<---------ARR14(2) ----->GLK1(2)                    ---------->DOF2<------ZmHOX2a(1)    --------->ARR14(2) ----->ARR11(3)               ----------->HVH21 <---------YAB1  --------->ARR11(3)  --------->YAB1  - -----GLK1(2)       --------->AHL20(2)    --------->AHL20(2)    --------->ARR11(1) --------->ICU4 ---   atcttgtttctattaaagttcaaaaaatagaccggacaaagttataaattaggattatataaaacagatatggatatgaatcgccataataagcattaaa  10895100                                                  --------->CCA1(2)                                               --------->DAG2                                              --------->DAG2             <---------WOX13(1)      <---------ARR11(3)            <------------CBF         --------->ARR11(3) <---------------AGL15               --------->ARR14(2)                  --------->GLK1(2)         -- --------------->AGL15               --------->GLK1(2)                  <---------GLK1(2)         <-- ================MADS_MADS           <---------ARR14(2)                 <---------ARR14(2)        --- ---------------->AGL2              --------->RVE1(1)  ------->TEIL     --------->ARR14(2)       ---- ------>TOE2(3)              --------->YAB1  ---------->DOF2    --------->YAB1             <---------   cctccatattgagtaattgactaatttacaaagataaaaaatctgcaaaaaggtatgcatttacaagaatagccgattctattcatgtcaaatttacaaa  10895200                                                                                       <---------ICU4            <---------ARR14(2)                                                         --------->YAB1 ------->CCA1(2)                                                                      <---------ATHB12 -------AHL20(1)                    <---------ATHB12                                  --------->ICU4 ------>AHL20(1)                  --------->WOX13(1)                             --------->TOE2(3) ----->AHL20(2)                 ------------>CBF                                 --------->TOE1(3) --GT1      --------->ARR14(2)<-----------GT1 ---------->DOF2          --------->MYB46(3)         <--   tatataagaatacaaatcccctaaacacatcttaaccaattactcaacaaaagagaagaaaatgacatctctaacaactcaaaccctaatcatcaccatt  10895300                                                                            <-----------GT1                                                                ----------->HVH21                                                               <-----------HVH21                                                               <-----------TGA1                                  --------->AtMYB61           <---------ANAC58                               <---------ALFIN1               <---------ANAC55(2)           <--------                              --------->MYB46(3)              <---------ANAC58 --------->TOE1(3)     <-----------GT1 ------>ZmHOX2a(1)            --------->ARR14(2)       <-----------GT1  --------- ---------GT1    <---------ARR11(3)<-----------HVH21          --------->ANAC46 --------->TOE2(3) <---   tttcttcttacaatcccaacatccttcgcatcaccaccatcactcgaagacgttttcgcacaatgcgtcaccgattttaaaccttcaaatccaaaatccc  10895400                                                                    --------->TOE2(2)                                                                    --------->TOE2(3)                                                              <---------ANAC55(2)                   -                       --------->ANAC46                       --------->ANAC46              ---------                     --------->MYB52(1)                       --------->ANAC55(2)           ---------                  --------->ANAC58              ------>ZmHOX2a(1)  <---------HSFB2a(1)      <--------                  --------->ANAC46             --------->TOE1(3) --------->ARR14(2)         --------- -ARR14(2)        --------->ANAC58             --------->TOE2(3)<---------MYB52(1)          --------- >ARR14(2)   --------->ARR14(2)        ------>ZmHOX2a(1)     <-------TEIL              ----------->HVH21 ------ALFIN1<---------ARR14(2)    <-----------GT1  --------->MYB46(3)   <---------MYB52(1) ---------   caatccaaaactacatatacactcaacgaagccctaatttcctcacaatccttaacaactacgtccgtaaccttcgttacttcaacaacatgacacgtaa  10895500                         <-----------HVH21                                            --------->LBD16                        --------->bZIP60(1)                                         <---------LBD16                        <---------bZIP60(1)                                         =================                     --------->LBD16                                                ------>ZmHOX2a(2)                    <------NtERF2                                                  ==================                    <---------ANAC46                                               <------ZmHOX2a(2)                   <---------At4g35610                                            <---------GLK1(2)                   <---------LBD16                                                --------->ARR14(2)                   ------>NtERF2                                                --------->LBD16                   --------->LBD16                                          --------->ARR14(2) --------->LBD16  <---------ANAC46                                          <---------ARR14(2) -------->ANAC46  --------->DEAR3(1)                                       <---------At4g35610 >ANAC46         --------->ATERF1(1)                                       --------->At4g35610 >ANAC55(1)     ------>NtERF2                                            <---------ALFIN1 -ANAC55(2)  --------->ZAT2                                  <---------GLK1(2)<---------LBD16 >ANAC55(2)  --------->At4g35610                           --------->ANAC58<---------ZAT2      <----- >ANAC58     <---------ZAT2                    <---------ATHB12     ------>NtERF2 <---------ARR14(2) >ANAC58     <---------At4g35610       --------->ANAC46    --------->ANAC58--------->ZAT2 --------->ALFIN1   acccgtagcgattgtagctgccgcggatgtcactcacatccaggctacaatcacttgtgccaagaaactcggcctccagctccggatccgcagtggagga  10895600                                                                                               ------                                                                                   ------>ZmHOX2a(1)                                                                                  --------->TOE2(3) <                                                                                 ------>ZmHOX2a(2) --                            <---------ATHB12                                    <------ZmHOX2a(2) <--                            --------->MYB46(3)                                 <---------ARR11(3) ---                           -------->P         <---------HSFB2a(2)              --------->ARR14(2)----                          --------->WOX13(1)  --------->HSFB2a(2)        <---------YAB1      ------>NtERF2                <---------ANAC58         --------->WRKY12              --------->YAB1       <-------- =HOX2a_HOX2a   <---------ANAC58       <-------GAMYB                --------->WOX13(1)   --------->ANAC46 =HOX2a_HOX2a   <---------ANAC46 --------->ATHB12             <---------LBD16  <---------ARR14(2)<--- -ZmHOX2a(1)   ---------->ID1--------->ATHB12 ------>ZmHOX2a(1) --------->LBD16--------->ARR11(3)<---   catgactacgacggtatgtcgtatttatcaaccattgatttcgttgtcctagacatgttcaatctccggtctatcaatatagatcctaaactcgacaccg  10895700                                                                                   <---------ARR14(2)                                                                                   --------->GLK1(2)                                                                                   --------->ARR14(2)                                                                                  --------->ARR14(2)                                                                                  <---------GLK1(2)                                          --------->ATERF1(1)                   --------->LBD16       --------->ARR14(2)                <---------ATERF1(1)                    <---------RAP2.6(3)       <---------ARR14(2)           <---------LBD16                            --------->RAP2.6(2)  <---------PCF2              --------->CCA1(2)                                --------->LBD16  --------->TCP15(1)          <------ZmHOX2a(2)                                --------->HSFB2a(2)  --------->TCP20            <---------ARR14(2)                               <---------LBD16 <---------DEAR3(2)          --------->AGP1                                  --------->MYB52(1) --->DEAR3(1)                --------->ARR14(2)                             ------>ZmHOX2a(1) ---------MYB46(3)           >>>>>>>>>GATA-1                              <---------ANAC58 ------->ALFIN1              >>>>>>>>>GATA-4         --------->ANAC58     <---------ANAC58 -----MYC3                   >>>>>>>>>GATA-3         --------->ANAC58  --------->GLK1(1) ---->MYC3                   <---------ARR11(3)    ---------->DOF2     <---------GLK1(1) ----->O2                    >>>>>>>>>GATA-2   ------>NtERF2          --------->ARR14(2) -ALFIN1   --------->LBD16   --------->ARR11(3)----------->RAV1(1)--------->LBD16 <---------ARR14(2) ------ANAC46 --------->ABI4(2)------>ZmHOX2a(2) --------->MYB46(3)   <---------ARR14(2)   ------>ZmHOX2a(1) ------O2<---------LBD16    --------->GLK1(1)<------NtERF2       <---------ANAC46<------NtERF2      <   cgtgggtccaatccggtgctacgcttggagagatctactacggagtcgccaacaaaagcaatgacctccgtggatttcctgccggaatctgtcctggttt  10895800  Previous    Next  AGI:  At1g30710.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G34575.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42593.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 10895262    to: 10897091    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version