Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(1)                                                                      <---------AHL20(1)                                                                   --------->YAB1            --------->ARR11(3)                                   --------->AHL20(2)            <---------ARR11(3)                                   <---------AHL20(2)            <---------GLK1(2)                                    <---------YAB1        <---------ZAT18     ------->TEIL                           --------->ANAC58    --------->TOE2(3)      --------->ZAT18 ------->GLK1(2)                            --------->ANAC58  <---------AHL20(1)       --------->ZAT14 ------->ICU4                       --------->ARR11(3)        --------->AHL20(1)       <---------ZAT14 ->DOF2   ----------->ARR10     ---------->DOF2            --------->AHL20(2)       <---------ZAT6   gattatgagcctaagattttgaatttgtattggtaaaagaaattgaacgaaaatttcagaaaaaaatattaataaattgaacgatagagttcacttacta  10892200                                                                               <---------YAB1                                                                       --------->bZIP60(1)                                                                       <---------bZIP60(1)                                                                       <---------TGA2(1)                                                                    ----------->HVH21                                                                   <-----------HVH21                                                                  <---------ANAC58                                                                  <---------ANAC55(2)                                                                  <---------ANAC58                                                                  <---------ANAC55(1)   <---------WRKY45                                               --------->ANAC55(2)   <---------WRKY38(1)         ---------->DOF2         <---------MYB52(1)--------->ICU4   <---------WRKY12  --------->YAB1               --------->GLK1(2)--------->LBD16  <<<<<<<<<WRKY6    <---------YAB1         <----------ID1         <---------ANAC46   <---------YAB1   catagtcaactagtgcctagctataatagtttcaaaagacaaaaaaaaacaaaatcggttaactacttccgtgacataattctcattttgatttttgaat  10892300                                                       --------->YAB1                                                    --------->YAB1   --------->ANAC58                                         <---------TOE2(3)           <---------ANAC55(2)                         <---------ARR11(3)<---------ICU4            --------->ANAC46                         --------->ARR11(3)-------->HAHB4            --------->ANAC55(2)                         --------->GLK1(2)<---------YAB1             --------->ANAC55(1)                     --------->YAB1     --------->YAB1<---------YAB1 --------->ANAC58              <-             ----------->GT1  --------->AHL20(2) <----------DOF2   <---------ALFIN1     <---------YAB1           ---------->DOF2  <----------DOF2--------->YAB1     --------->WRKY12   <-----------GT1   --   ccagtctaatttgaaaagtatattcaaaatctttaaatccattaatgataacttttataatacgttgacacacgcaattgtatatacaatattcttgaat  10892400                           <------ZmHOX2a(2)                  <---------AHL20(2)                  <---------AHL20(1)        --------->ARR11(3)                  --------->AHL20(2)        --------->GLK1(2)                             <---------AHL20(1)            <---------HSFB2a(2) --------->ZAT14                                     <<<<<<<<<<WRKY26            <---------HSFC1(1)  <---------ZAT14                                     <<<<<<<<<<WRKY38            --------->HSFB2a(2)<---------ALFIN1                                <---------ANAC58            --------->HSFC1(1)--------->ANAC46                                 <---------ANAC58   ----------->GT1--------->ARR11(3)        <---------ARR11(3)          <-----------GT1   --------->AHL20(1) --------AHL20(2) --------->AHL20(1)    --------->YAB1           ----------->RAV1(1)<<<<<<<<<<WRKY43 ------->AHL20(2) <---------ARR11(3)   <---------ATHB12       ------->TEIL <----------DOF2--------->ARR11(3)   tttaaatgtaaattctagaatatattgcgatcaccacactaatcaaaatctttgggacaacttgaacccacatttgacttttcttggtcaaatattttgg  10892500                                                                    <---------YAB1                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                              <---------YAB1          ------>ZmHOX2a(2)                                  <---------AHL20(2)        <-----------ARR10                                    --------->AHL20(2)        <---------ARR11(3)                                   --------->AHL20(1)        --------->ARR11(3)                   --------->YAB1  <---------AHL20(1)    <---------AtLEC2                   ------->GAMYB        --------->AHL20(2)    --------->YAB1         ---------->DOF2  <-------TEIL   <---------YAB1  <---------YAB1   --------->YAB1     --------->ANAC46   --------->YAB1   ---------->ID1<-------TEIL  --------->AtLEC2----------->TBP <------NtERF2     *TSS<---------ATHB12<-----------RAV1(1)   catcatgcatgatcttctctataaaaaccaaaaggcctcaacgacattcataaactcagtcattatatttatttttgttgtatttcaacgttcaatctct  10892600                                                     ---------->DOF2                                                   --------->ANAC58                                        <---------------AGL15      <---------At4g35610                                        --------------->AGL15   --------->At4g35610                --                                       <-----------------AGL3 --------->YAB1          --------->ANAC58                                   ---------->ID1  --------->ANAC58--------->At4g35610--------->ANAC58                            <----------DOF2       --------->WOX13(1)                  --------->ANAC46                <---------GLK1(2)<-----------RAV1(1)<---------ATHB12     <---------LBD16      <------   --------->AHL20(2)  ---------->ID1  <-----------------AGL1 <---------ICU4     <----------DOF2   --   gaaaatgaaatatgcattgattcttgttctcttttttgttgtcttcatatggcaatcaagctcatcatcagcaaactcggagactttcacacaatgccta  10892700                                                                                            ---------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                         <---------MYB52(1)                                                            ------>ZmHOX2a(1)          --------->ANAC46                                               <---------HSFB2a(2)                     --------->ANAC55(2)                                               --------->HSFB2a(2)               ----------->RAV1(1)         ------>NtERF2                         --------->ANAC46              --------->ANAC58      <-        --------->DEAR3(1)                    <---------LBD16                --------->ANAC58    ----        <---------ETT(1)        --------->ANAC58  --------->ARR14(2)         --------->ANAC46-------- ------->TOE1(3)                --------->ANAC58  <---------ARR14(2)     <-----------GT1--------->LBD16 ---MYB59<---------ATERF1(1)    --------->ANAC46--------->LBD16   ------>ZmHOX2a(1)--------->MYB46(3) ------->TOE2(3) <---------ATHB12             <-----------------AGL1 --------->LBD16   <---------ANAC55(2)   acctcaaactccgaccccaaacatcccatctcccccgctatcttcttctccggaaatggctcctactcctccgtattacaagccaacatccgtaacctcc  10892800                                           ----------->RAV1(1)                                         ------>NtERF2                                         <------NtERF2                                      <--------                                         --------->LBD16                       <---------ANAC46     -                                        --------->DEAR3(1)          ------>NtERF2     --------->ANAC46                                        --------->RRTF1(2)          --------->LBD16   --------->ANAC58                                        --------->RAP2.3(2)        --------->RAP2.6(2)--------->ANAC58       --------->AtMYB61                --------->RAP2.6(2)      <---------ZAT2<---------ANAC58     <       <---------ALFIN1                 --------->ANAC46        --------->ANAC58   --------->ARR14(2)    --------->ANAC46                   <---------LBD16     ------->MYC2        <---------ANAC58   <-- --------->REM1(1)                     --------->RAP2.3(1) <-------MYC2       <---------LBD16   <---- >MYB46(3)--------->TOE2(3)      <---------YAB1            <-------MYC3    <---------ANAC58<---------ALFIN1 ---------DOF2                 --------->YAB1<---------ALFIN1   --------->ANAC58   <---------ARR14(2) ----->At4g35610  --------->ANAC46<---------ICU4           ------->MYC3    <---------ANAC58--------->MYB46(3) ->TOE2(2)--------->AtMYB61   ------>ZmHOX2a(1)     ------->TEIL--------->ANAC46--------->LBD16------   gcttcaacaccacctcaactccgaaacccttcctcataatcgccgcaacacatgaatcccatgtgcaagccgcgattacttgcgggaaacgccacaacct  10892900                                                  --------->ANAC55(2)                              <-                                                  <---------ANAC55(2)                              <-                                                  <-----------------AGL1                           <-                                             --------->ANAC58                                     ---                                             <---------ANAC55(2)                                  <--                                             --------->ANAC55(2)                                  ---                                             --------->ANAC55(1)                                  <--                                             --------->ANAC58                                     ---                                             --------->ANAC46                              --------->TOE2(2) -ALFIN1 --------->YAB1             <---------ANAC46                                      --------->MYB46(3) -------->At4g35610                 <---------ANAC58                               --------->ICU4<--- ---------At4g35610     --------->ANAC58    <---------TOE1(2)                 --------->ANAC46   ---- ---------RAV1(2)       --------->ANAC58    <---------TOE2(2)                 ----------->HVH21 <---- -------HVH21       --------->ATERF1(1)<-----------HVH21                     ------>ZmHOX2a(1) <----- --->TOE1(3)   --------->ALFIN1     <---------ANAC58               <---------MYB52(1)   <-----------GT1   tcagatgaaaatcagaagtggaggccacgactacgatggcttgtcatacgttacatactctggcaaaccgttcttcgtcctcgacatgtttaacctccgt  10893000           --------->TGA1a           <---------TGA1a        <---------ETT(2)        --------->ETT(2)       --------->DDF1  <---------MYB46(3)             --------->TCP20 -----MYB46(1)                   --------->TCP15(1) --------ANAC46                  <---------PCF2 -----MYB83<---------bZIP60(2)  <---------DEAR3(2) ------>MYB55(2)               <---------MYB46(3)                    <---------------AGL15 -------DEAR3(1)              --------->ALFIN1                       --------------->AGL15 ------>MYB46(2)             ------->MYC3                           ----------------->AGL3 -------MYB46(3)             <-------MYC3                           <-----------------AGL2 ------>MYB52(2)            <---------ANAC46                      <-----------GT1 ------MYB55(1)   --------->ANAC58                  <---------LBD16 <-----------------AGL3 ----->SPL7--------->O2     <---------O2      <------NtERF2      <---------YAB1 -----MYB52(1)    --------->ANAC58            ----------------->AGL1----------------->AGL2       <--- ----SPL7  <---------O2     --------->O2     ------>NtERF2 ----------->GT1                       <---   tcggtggatgtcgacgtggcaagtaagaccgcgtgggtccaaaccggtgccatactcggagaagtttattactatatatgggagaagagcaaaaccctag  10893100  Previous    Next  AGI:  At1g30700.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20830.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42604.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60572.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80091.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 10892552    to: 10894554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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