Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                <----                                                                                                -----                                                                                            ---------                                       <---------ZAT2                                       <--------                                       --------->ZAT2                            <------NtERF2  <----                                    <---------ANAC58                            ------>NtERF2  ------                                    <---------ANAC46                          --------->ATERF1(1) --- ------>ZAT2                     <----------DOF2                              <------NtERF2 <-------- -------At4g35610              ------>ZmHOX2a(1)                     <----------DOF2   --------->ZAT14 -------ZAT2           <<<<<<<<<TBF1<---------ANAC58  --------->At4g35610   <-----------RAV1(1)------ ----GT1       <------------------------ANAC81        <---------At4g35610   <---------REM1(1)  ------   agctcttgagtcttctctgtgattcttcttctcctctttcgtgctgcgatgctctgagcagatagctctcgcttcttggtgtcgccttgttcagtccacc  10879800      ------->TEIL --------->TOE2(3) --------->TOE1(3) ---->MYB46(1) ------>P ---->MYB83 --->MYB83 -----MYB111(1)                                                    --------->GLK1(2) ---->MYB46(3)                                              <---------bZIP60(1) >ZAT14                                                     --------->bZIP60(1) -ZAT14                                                     ----------->GT1 -----MYB55(2)                                              <---------REM1(1) --->ANAC58             <------ZmHOX2a(1)         --------->HSFC1(2) --->MYB46(1)        <-----------RAV1(2)          <---------HSFB2a(1) -ZAT18  <---------------------WRI1               <---------At4g35610 --->ANAC58       <---------GLK1(1)               --------->HSFB2a(1)                 <-------TEIL --->ANAC46       --------->GLK1(1)               <---------HSFC1(2)       ----------->GT1   caaccttgaacgtcgatgagaaatcaggagcttgaaacttggaaatgttggaagcttctgtgatgtaagaatccaagaggtaattagattcagggctagg  10879900                                                           --------->ALFIN1                                             <---------ANAC46                                           <---------ARR14(2)               <-------GAMYB          <---------ATHB12   <---------ANAC58              <---------MYB46(3)    --------->WOX13(1)   <---------ANAC58          ----------->HVH21<---------At4g35610           <---------ANAC55(1)        <---------ANAC58   --------->At4g35610<-----------RAV1(1)                ----------->HVH21        <---------ANAC58   <---------ZAT2  --------->GLK1(2)         --------->GLK1(2)  --------->DAG2           --------->ZAT2  --------->ARR14(2)--------->ALFIN1   <-----------HVH21 ---------->DOF2      <XXXXXXXXXXXXXXXXXXXXMIR773B       <---------ANAC46      ------>ZmHOX2a(1)   ggaaaaagggtcgtgactgttgaaatggaagctggagtcaatgagtttctggtgttttggcgtgtggaaggaatctaattcctgtgactcgttgaagact  10880000                         <---------ANAC58                         <---------ANAC58                      <---------GLK1(1)                        <---------ZAT6                   <----                      --------->GLK1(1)                   --------->YAB1                    <--------                     --------->ARR11(3)                 <---------ARR11(3)              ---------->DOF2                     <---------ARR11(3)                 --------->ARR11(3)           --------->At5g28300                    <---------HSFB2a(1)                --------->YAB1               ----------->GT1                    --------->HSFB2a(1)               --------->ICU4               <---------DEAR3(1)             <------ZmHOX2a(1)         --------->MYB52(1)<---------YAB1   --------->LBD16   ---------   cgggtcttagggctaggaaggaagatttcttgagatggaagaaacgactcgtagaaatgatcatagtgatcaaacccgaagagagacggtgaaagagctt  10880100                         <--------P                                <---------ARR14(2)           <----                        <-------GAMYB                              --------->ARR14(2)           -----                       <---------MYB46(3)                    --------->YAB1                     -----                      <---------ANAC58                  --------->LBD16              ------------>CBF                      <---------RAP2.6(2)              <---------LBD16   <-----------HVH21      <----     --------->CCA1(2)<---------ANAC46                <---------LBD16   --------->bZIP60(2) ------>ZmHOX2a(1)    --------->ARR14(2)<---------ANAC58         <---------MYB52(1) <---------CCA1(2) --------->ANAC58  <------NtERF2      <---------LBD16          <-----------HVH21 <---------ICU4      --------->ANAC58 ---TEIL         <---------REM1(1)          <------------AtMYB77--------->YAB1     --------->DAG2 -ARR11(3)       <-----------RAV1(1)      --------->GLK1(2)<---------KAN4(2)      ---------->DOF2 >ARR11(3)   <---------ANAC46         >>>>>>>>>TBF1 <-----------HVH21   --------->ANAC46  -----------   cgtcgggatacaatggctgatgttgcggttgctcttggaagaagaaactgtcagtttcagggataatcatatccacatcagggataaagcaatcctgaag  10880200                                                                                             --------                                                                                            <------ZmHOX2a(1)       <---------At4g35610                                                               <-----------RAV1(2)       --------->At4g35610    <---------At4g35610                                        --------->YAB1 -----At4g35610          <---------ANAC58                                             --------->WOX13(1) ---->At4g35610          <---------ANAC58                                           ------------>CBF ---->ZAT2              --------->At4g35610                ------->TEIL            --------->ANAC58 -----ZAT2          <---------REM1(1)                   <---------YAB1             --------->ANAC58 >RAV1(2)       <---------HSFB2a(2)         <---------TOE2(3)          <---------ATHB12 <---------ATHB12   ctggattacatctgagttggagaagtagcttaagcagtccatagttaagaaatagatgatgaatttttagcaaatgaagaatgtgaagcaatcaggagca  10880300                                                                                             --------           <------MYB46(1)                                <---------At4g35610      --------->ANAC46           <------MYB83          <---------ICU4      <---------WOX13(1)           <------------------          <---------AtMYB61  --------->AHL20(2)     <------------CBF             <---------DOF5.7(2)     --------->ALFIN1        <---------AHL20(2)   <---------AHL20(2)            <---------ARR14(2) ---->AtMYB77            ----------->GT1        <----------DOF2<---------ATHB12 --------->ARR14(2)---   gttacagatggggaggttttgagtaaatggtttaattaagacttaattagctttaattgctgctaatcaagcttagagagagtaaacgcagaaaacaaag  10880400                --------->CCA1(2)       <------ZmHOX2a(1)    <-----------RAV1(2)                 <----------DOF2   <---------ZAT14  <------ZmHOX2a(1)              --------->GLK1(2)        --------->ZAT14                      <----- -->DOF2      --------->CCA1(2) --------->ARR14(2)        --------->ZAT18<---------TOE2(3)<---------ANAC46 ---WRI1     <---------ARR11(3) <---------GLK1(2)      <---------ANAC46 <-----------RAV1(2) --------- ------->DOF2--------->ARR11(3) <---------ARR14(2)<----------DOF2 ------------>CBF   ----------->GT1-   gaaaggacaggagaagatatatgagagaagcagggattctgtcttttgttttcttttgagtgaagtaagacaattcaggtagtaagtttgtaacttgtaa  10880500             --------->AHL20(2)        --------->ANAC58        <---------ANAC55(2)        --------->ANAC55(2)                                  <------ZmHOX2a(1)        --------->ANAC58                              <------ZmHOX2a(1)    <------MYB83    <-----------HVH21---------->DOF2              <---------ANAC46         <------MYB46(1)   ------->GAMYB--------->ICU4                    <---------ANAC58   <---------ZAT14           ------ ------GT1   <---------AHL20(2)                   <---------ANAC58  <----------DOF2 <----------DOF2 -->GT1 --------->ANAC46                 <---------TOE1(3) <---------TOE1(3)     <-----------GT1----- -------->MYB52(1) <---------YAB1        <---------TOE2(3) <---------TOE2(3)    <-----------GT1<-----   cttaactgtcacgaaataaatatgaaagagagagggagaagttagggttttggcgaggattaaggaagggctatagtgggttttaacttttagatttagc  10880600                                                                  --------------->AGL15                                                                  ===================================                                                            --------->AHL20(1)                                                            <---------ARR11(3)          <------------            --------->ICU4                                  --------->ARR11(3)          --------->MYB59         ------>ZmHOX2a(1)                            --------->ANAC58                  -------------     ------->GAMYB                             ===================================MADS_MADS   -------->P                                  <---------------AGL15                    -------------  ------->GAMYB                                --------------->AGL15              <---------MYB52(1) <---------MYB111(2)                          ----------------->AGL2           <---------TOE2(3) <--- --------->MYB46(3)               <----------DOF2     --------->ANAC58         ---------->ID1    <--- --->At4g35610                 <---------AHL20(2)     --------->ANAC46     <---------ANAC58      ---- ---->TOE1(3)                  <-----------GT1----------------->AGL1       <---------ANAC58 <-------TEIL ----At4g35610        <------NtERF2    --------->TOE2(3)   --------->AHL20(2)----------->TGA1    ----   ttaacaacctcctaaatattaggcctcgtttattttctttttcttaattccatttcaagaaatatatacttatattagcttgacgttattttggtacatt  10880700  Previous    Next  AGI:  At1g30670.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G34820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46758.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 10879155    to: 10880170    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version