Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------WRKY38(1)                                                                 <<<<<<<<<WRKY6          <---------YAB1          --------->YAB1       --------->ANAC58   <---------ATHB12            --------->YAB1          --------->ANAC58                          ---- -------->RAV1(1)      ------->MYC3       --------->YAB1  ----------->RAV1(1)      --------->MYB52(1) --->ANAC58            <-------MYC3      <---------YAB1--------->ANAC46--------->ANAC58  <---------WRKY12 --->ANAC46    --------->YAB1<---------YAB1            --------->AtLEC2--------->ANAC46  <---------WRKY38(1) --->ANAC58  ------->TEIL --------->AHL20(2)        <---------ATHB12   --------->ANAC58 --------->WRKY18(1)   ccacaatcacttatgaatcaaaacacgttttattaataaaaacatcataactcaaccatgccacatagtcaacaaggaatatgaagaacggtcaacataa  10854100                   ------->GAMYB                  --------->MYB46(3)                  <---------MYB52(2)             --------->ANAC46       --------->KAN4(2)      <---------KAN4(1)      <---------HSFC1(2)      --------->HSFC1(2)      --------->HSFB2a(1)                                                              --------->GLK1(2)      --------->KAN4(1)                                                       ----------->GT1      <---------HSFB2a(1) --------->ANAC46          <---------ATHB12      <---------HSFC1(2)     <---------KAN4(2)  --------->ANAC46    ------->TEIL            ---------->DOF2--------->YAB1 ----->ZAT6 ------>ZmHOX2a(1)            <---------YAB1<---------YAB1     --------->HSFC1(2)---------   ctctaagaacattcctcacaacaaacacacatcaaaatcaactatgaatttgaaatcaagataaaaaaaaaaaagaaacatcgtaacataatctatgacc  10854200                            <---------AHL20(2)                            --------->AHL20(2)                            <---------YAB1                           --------->YAB1                       --------->LBD16                      --------->LBD16                     <---------HSFB2a(2)                      <---------YAB1                     --------->HSFB2a(2)                <---------AHL20(2)                        ---                   --------->PCF5                       --------->AHL20(2)                <---------MYB52(1)                --------->MYB59                  <-----------GT1                      --------->MYB52(1)            <---------GLK1(2)                   --------->AHL20(2)                 <<<<<<<ZML2    --- -->HVH21   --------->ARR11(3)         --------->YAB1  --------->AHL20(2)    --------->ZAT6    ------   acttggaactattagattttggtcccgaatattaatatcaaacataacaaataactatttatttctaattagtcaggtttcactagaacaccggtatcaa  10854300                                                                                         ------------                                                                                         <-----------                                                                                         <---------ICU4                                                                                      --------->ATHB12                                                                                 --------->ARR11(3)                                                                                --------->YAB1                                                                             --------->YAB1                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                        <---------AHL20(2)                                <-----------------AGL1             <---------TOE2(3) <---------YAB1                         <<<<<<<<<<GT-3b                         <---------AHL20(2)--------->YAB1 ------>YAB1          <---------ARR11(3)                         --------->AHL20(2)<---------ICU4 ------>AHL20(2)      <---------AHL20(1)            --------->TOE2(3)   --------->AHL20(2)         <- --->WOX13(1)         --------->AHL20(1)           ----------->GT1---------->DOF2--------->GLK1(2)---   ttaaaaaaaaaacaatatgcacaatatttttcttatacaatatggaaattgaaatgttaatagaaaattaaagtttaattaataatcttgattagtacta  10854400                                                                                                <----                                                                                              <------         <---------AHL20(2)     <---------ICU4                                               <-------         --------->AHL20(2)    <---------YAB1                             --------->At4g35610--------        --------->AHL20(2)   <---------ICU4                             --------->DAG2       <-------     --------->AHL20(2)     <---------YAB1                             ---------->DOF2       <-------    <---------AHL20(2)<---------ZAT18                            --------->ANAC58            --------    --------->AHL20(2)--------->ZAT18             <-------TEIL   --------->ANAC58           --------- --->AtSPL8    --------->At4g35610             --------->ICU4  ---------->DOF2       ----------->GT1 ----AtSPL8    <---------At4g35610         <-----------HVH21--------->ANAC58        --------->DAG2 --------AHL20(2)     <---------ZAT14     --------->ANAC46  --------->ANAC58       ---------->DOF2 ------>AHL20(2)      --------->ZAT14   --------->REM1(1) ---------->DOF2 <---------At4g35610--------   tataatataaattaatctgcagactgcaccatcattcttgctacatgtcatgttcatatcaaaagcaaagcaaaaaagctgacaaaaaagtcaaatatat  10854500                                                                <---------CCA1(2)          --------->HSFC1(2)                                  <---------ALFIN1          <---------HSFB2a(1)                               ------>NtERF2          --------->HSFB2a(1)                               --------->LBD16 -----AHL20(2)                                             --------->ANAC46 ---AHL20(2)                                              <---------LBD16 --AHL20(2)               <------------CBF              --------->ARR14(2)                    ------- ->AHL20(2)            <----------DOF2                  <---------ARR14(2)                  <-------- --AHL20(1)        <---------CCA1(2)                   <---------HSFB2a(1)                 --------->MYB52(1) --ARR11(3)      <---------ICU4                        --------->GLK1(1)                  <---------ALFIN1 ->AHL20(1)     ------>ZmHOX2a(1)                      <---------GLK1(1)         --------->YAB1 ----- >AHL20(2)<---------HSFC1(2)                        <------ZmHOX2a(1)         <----------DOF2-------- ->ARR11(3)--------->KAN4(2)   *TSS             --------->TOE1(2)     <----------DOF2    ------>ZmHOX2a(1)   tttttactaagaaaattcctcatttctttattgttttgttttcttataaaccgaggaatttccgccatctctctttctctctttcatcgtcctcaccgga  10854600                                                                                              <------                                                                                              <------                                                                                              -------                               ------>ZmHOX2a(1)                                              -------                           --------->ARR14(2)                                             --------->ANAC58                       <---------TOE2(2)                                                  --------->ANAC58                       <---------TOE1(2)                                              --------->ANAC46   --------->DEAR3(1)  --------->SPL7                      ----------->GT1           ------->GAMYB  <------NtERF2      <---------SPL7                       ----------->GT1          --------->ANAC58 ------>NtERF2      --------->TOE2(1)                   ----------->GT1            --------->ANAC46 -->LBD16           --------->TOE1(1)                ---------->DOF2             --------->MYB46(3) -LBD16            <---------------AtSPL3         <----------DOF2                <---------ALFIN1 ----->DOF2<----------DOF2 <---------ARR14(2)     --------->TOE1(3)            --------->ANAC46 ->ANAC46  ----------------------->TaNAC69(2)     --------->TOE2(3)    ------->TEIL--------->ANAC58   acgcgcctactctctttccacatcgtacgtttcctctctctaaattcttcaactttaaaggtgataaaaattgaatctttcccacaacccacaagaaaat  10854700                                                                     --------->ANAC55(2)                                                                     <---------ANAC58                                                                     <---------ANAC55(2)                                                                     <---------ANAC46                                                                  --------->ARR14(2)                                                                <------MYB46(1)                                                                <------MYB83                                                                <---------DEAR3(2)                                                                --------->MYB52(2)                                                                <---------MYB46(3)               ----                                                               --------->MYB111(1)               <---                                                               <---------AtMYB61                 ----     ------>ZmHOX2a(1)                                        <--------P                         <---     <----------DOF2                      --------->At4g35610<---------MYB52(1)                 <---- --------->ARR14(2)                    <------ZmHOX2a(2)   <---------YAB1                ============ <---------ARR14(2)                    ===================HOX2a_HOX2a<---------ANAC58    ---------->DOF2 ---HSFB2a(1)                    <----------DOF2       <---------ARR14(2)            <---------ZAT18 ---HSFC1(2)                  --------->ANAC58     <---------HSFB2a(2)               <---------ZAT14- -->HSFC1(2)                  --------->ANAC58     ------>ZmHOX2a(1) <---------ANAC55(1)--------->ANAC46 -->HSFB2a(1)<----------DOF2<-----------GT1        --------->HSFB2a(2)               --------->ZAT14<   tcgaatcctttctctctttctatctcttagtcacgctttcgatcagcaatctcctcgaattctggttggttccgtctctgttttctgtacacaaagccct  10854800                     <------NtERF2                    ------>NtERF2                   >>>>>>>>>AtERF-5                   >>>>>>>>>AtERF-7                   >>>>>>>>>AtERF-2                   >>>>>>>>>AtERF-4                   >>>>>>>>>AtERF-3                   --------->RRTF1(2)                   --------->RAP2.3(3)                   --------->RRTF1(3)                   --------->DREB2C(2)                   --------->DEAR3(1)                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58                   >>>>>>>>>AtERF-1                   --------->RAP2.3(2)                  --------->RRTF1(1)                  --------->DEAR3(2)                  --------->ATERF1(1)                  --------->ERF1             <-------MYC2             ------->MYC3             ------->MYC2             <-----------HVH21             <-------MYC3            =========================bZIP_DOF            =========================bZIP_DOF            --------->ANAC55(2)            <---------ANAC55(2)            --------->ANAC46            --------->O2            <---------O2        --------->CCA1(2) ---------->DOF2                                             <--------------   <-------GAMYB  --------->RAP2.3(1)                                             <xxxxxxxxxxxxxxxxxx   ===================MYC_MYB                                                    <xxxxxxxxxxxxxxxxxxx  <---------MYB46(3)<---------RAP2.6(3)                                         <xxxxxxxxxxxxxxxxxxxx ----->At4g35610 <---------At4g35610                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------At4g35610 --------->At4g35610                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->ZAT2 <---------TGA1a                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------ZAT2 --------->TGA1a                           <-------TEIL            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------RAV1(1)  <---------ATERF1(1)              --------->LBD16             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) =====================bZIP_DOF    <----------DOF2 <---------------AtSPL3     <----------------------- -------->At4g35610--------->RAP2.6(2)           --------->HSFB2a(2)      <----------DOF2           - ---------At4g35610--------->ATERF1(2)      <<<<<<<<<TBF1         ---------->DOF2<xxxxxxxxxxxxxxxxxxx   gctgctgttgatacacgtgagccgccattaatgcccctttgttttcttcttccaggtacgttttcttcaaaagggccttttttttttttttttttttttt  10854900                                                                                                  <--                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                  ===================                                                                     --------->ARR14(2)       -------             <<<<<<<<<TBF1                                           <---------ARR14(2)       <------           <------------------------ANAC81                           <---------GLK1(2)        ------- <---------ANAC58                                                    --------->ARR11(3)       <------ <---------ANAC58                                                   ================================= <---------ANAC46                                                   ================================= ----------ANAC81              <---------At4g35610                  <------ZmHOX2a(1)         ------- xxsmallRNA(le3)     <---------ARR14(2)                          <---------HSFB2a(2)          ------- xxsmallRNA(si3)     --------->ARR14(2)                          --------->HSFB2a(2)          <------ xsmallRNA(si3)     <---------MYB52(1)                           --------->HSFC1(1)          <------ZmHOX2a(1) -ANAC81<----------DOF2  <---------At4g35610                ---------->ID1        ------>ZmHOX2a(1) --------->ID1    <---------ANAC58         <<<<<<<<<TBF1<----------DOF2           =================== xsmallRNA(le3)   <---------ANAC58    --------->GLK1(1)--------->TOE2(3)<-----------GT1   --------->YAB1   ttggcgttttctttcttcttccgtttctgcttcttctgagaattcttcttcacattacctttgtcttctaggattttctatttcctctaaaatcaggatc  10855000  Previous    Next  AGI:  At1g30620.1    Description:  HSR8/MUR4/UXE1 (MURUS 4); UDP-arabinose 4-epimerase/ catalytic. Identical to UDP-arabinose 4-epimerase 1 (MUR4) [Arabidopsis Thaliana] (GB:Q9SA77;GB:Q570B0;GB:Q8H7B9); similar to NAD-dependent epimerase/dehydratase family protein [Arabidopsis thaliana] (TAIR:AT4G20460.1); similar to DUR (DEFECTIVE UGE IN ROOT), catalytic [Arabidopsis thaliana] (TAIR:AT5G44480.1); similar to UDP-galactose 4-epimerase-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAC24804.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43109.1); contains InterPro domain UDP-glucose Range:  from: 10854531    to: 10858226    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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