Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->AHL20(2)              --------->YAB1    <---------AHL20(2)                                                                <----------DOF2    --------->AHL20(1)       <------ZmHOX2a(1)       <---------At4g35610            --------->At4g35610    --------->AHL20(2)     <---------TOE2(3)      ---------->DOF2         <---------YAB1          ---   ttgaaataaaatataagcataaaatgaataaggaagagagagagcaaaaccagaaagctcatggattgaagaagtcatgactcatgagcttaatgtccga  10805900                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  ---                                           ------>ZmHOX2a(1)                                      <--                                           --------->LBD16                                       <---          ---------->DOF2                ------>ZmHOX2a(2)                                   --------   <---------GLK1(1)                   --------->ARR11(3)<---------AHL20(2)           --------->ARR14(2)   --------->GLK1(1)          --------------->AtSPL3    <---------AHL20(2)            <---------ARR14(2) ------>At4g35610 ---------->DOF2      <---------ARR11(3)--------->AHL20(2)  --------->AGP1--------->ANAC46   agcagaattctgaaaagttccaaagaacagagtcagtacatgatcctggtaaacctattttaaataaactcaagaaccagaactatcaaatccccacaaa  10806000      --------->TOE2(3)   <-----------GT1 -------->TOE2(3)             --------->ANAC58 --------ICU4                 --------->ANAC58          ------>MYB46(1) ------->ATHB12            --------->WRKY18(1)  --------->ANAC46 ------->YAB1            --------->ANAC58  <---------ICU4 ------>ICU4             --------->ANAC58  --------->YAB1 -------ATHB12<---------AHL20(2)          --------->KAN4(1)                  --------->YAB1     <---- ------ARR11(3) <-----------GT1          <---------KAN4(2) --------->YAB1 <----------DOF2  ---------- ->ANAC46     --------->AHL20(2)        --------->YAB1  ------>MYB83--------->ANAC46  <----------ID1   atcattaacctcatatttaaactaaacaagtcaagctacttagaataatcacagaaccaaatcagaacatccacaactttcataaataacaacaaaagat  10806100                   --------->YAB1                  <---------ATHB12          --------->AHL20(2)       <--------HAHB4       <---------ICU4       --------->ATHB51      <---------YAB1    --------->YAB1<---------YAB1                      --------->ANAC58    --------->TOE2(3)                                 --------->ANAC58                    <---------GLK1(2)    --------->TOE1(3)                      ------>ZmHOX2a(1)                              <---------ICU4 -----YAB1<---------AHL20(2)              --------->TOE2(3)                     ---------->DOF2 >DOF2--------->ICU4             ------>ZmHOX2a(1)  ---------->DOF2           <---------ATHB12   gataaaccataattaaacctataattctcacagtcctactaaatcctaaaacagcaaagcaaaattctaacaaaaaacaaatcaaaggctaagaatttca  10806200               <-----------GT1          <---------AHL20(2)                                                                       *TSS         --------->AHL20(2)                                                                    <-----     <---------AHL20(1)               <---------ETT(2)                                         <-----     <---------ARR11(3)            ----------->HVH21                                           <-----     --------->AHL20(1)            ----------->TGA1                                         ---------   aaaccaatatataaaatttacctctctgcaattttctctgacgacgattagagagcctcttcttgaaaatgaagaacagagagagagcgagagagtgtcg  10806300                                  <---------ARR14(2)                              <---------ANAC58                                  --------->ARR14(2)                              <---------ANAC46                                  --------->ARR11(3)                           ----------->TGA1                        <---------ALFIN1                                       ----------->HVH21                       <---------ZAT18                                     <-----------TGA1                       --------->LBD16                                     <-----------HVH21 ----ANAC46          <---------LBD16  --------->LBD16                     --------->ANAC58 ----ANAC58     <---------ARR11(3)<---------ARR11(3)                      --------->ANAC46 ----ANAC58------>ZmHOX2a(1) --------->AHL20(2)                    --------->YAB1 <---------ANAC58  - >ALFIN1  --------->TOE2(3)<----------DOF2              ------>ZmHOX2a(1) --------->ANAC58          -   ttttcttcccttcctcaagttattccgcacttttaatatccccaaacttcagagcgtccttctcaactagcataaaacgtcatgacgttttcagtcttca  10806400                                      --------->ANAC58                                      --------->ANAC58                                              <               <------NtERF2          --------->ANAC46                                              <          --------->ANAC58           --------->SPL7                                            ------          --------->ANAC58        <---------ANAC58                                          <--------        --------->MYB52(1)        <---------ANAC58                                      --------->ANAC58       --------->ARR11(1)        <---------LBD16                                        --------->ANAC58   ---------->DOF2       --------->ICU4                    ----------->GT1              --------->ANAC46 -------->ANAC58       <-----------GT1--------->RAP2.6(2) --------->ALFIN1       <<<<<<<<<RAP2.2    < -------->ANAC58    ----------->GT1 ------>NtERF2 ------>ZmHOX2a(2)             <---------TOE2(3)   <   gcaagtaaagaaacggcagagtttgtaacaattgatgcggacgcaatatcgatcgtacaagtggagaattagagaagcgttttagattgcacgtagcaga  10806500         ------>ZmHOX2a(2)                                         --------->MYB52(1)        <------ZmHOX2a(2)                                          ------>MYB83       --------->ARR14(2)                                          ------>MYB46(1)       <---------ARR14(2)                                        <---------MYB59       <---------ARR11(3)                                        <---------MYB52(2)       --------->ARR11(3)                                        --------->AtMYB61       <---------AGP1                                            <---------MYB46(2)       --------->AGP1            <---------ZAT18                 <---------MYB111(1)      <---------YAB1      --------->At4g35610      <---------At4g35610         --------->LBD16            <---------GLK1(2)      <---------CCA1(2)        --------->ZAT2              ------->PIF5         --------->WRKY12 ---------ANAC58               --------->At4g35610         <-------PIF5         --------->WRKY38(1) ---------ANAC46               <---------ZAT2            <---------LBD16       <---------MYB52(1) --->At4g35610              <---------At4g35610        --------->ZAT18--------->TOE2(3)--------->GLK1(2) -At4g35610       --------->At4g35610                  <---------WRKY38(1)    <-----------HVH21 ---------ANAC55(2) ----------->HVH21         --------->ICU4  ------>NtERF2  --------->ANAC46 ---------ANAC58  <---------At4g35610   --------->ZAT6 <---------WRKY12   -------->P  --------->ARR14(2)   ttacgggcagatctaaaatttgctgaccgaagcagctcgcttacactactgattaagtccacggggacctaacctctacccgttgcccgattcttattgg  10806600         <---------ANAC58         <---------ANAC58              --------->ARR14(2)                                    ------->TEIL         <---------ANAC46              <---------ARR14(2)                             <------MYB83---       <---------ANAC46            <-------TEIL              --------->At4g35610      <------MYB46(1)      <---------MYB52(1)         <---------MYB52(1)          <---------At4g35610      <---------ANAC46     <-------GAMYB          <---------ARR14(2)       <---------HSFB2a(2)             --------->MYB59    <-----------RAV1(1)     --------->ARR14(2)       --------->HSFB2a(2)           <---------MYB52(1)   tattttctgttgtgtgagtcatcgatagcgaaaccggttcgtatttgtttgaattctagagacatcagacaagagagtaatctcggttcggtatgaatct  10806700                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                      --------->ATHB12                                                                                     <---------YAB1                                ------>MYB46(1)                                    --------->YAB1                                ------>MYB83                                      <---------YAB1                              <---------MYB59                                   <---------ICU4                              ------->GAMYB                                    --------->ICU4                           --------->MYB52(1)                                  <---------YAB1                        --------->REM1(1)                                    --------->YAB1                       <-------TEIL ---------->DOF2                         --------->ICU4      <---- --------->ZAT6     <---------At4g35610  --------->RAP2.6(2)                <---------YAB1--------->ATHB12 -------->HVH21     --------->At4g35610  ----------->GT1                    <---------ATHB12  -------   atgacactaattcgaattgttcagctacataaccgaacaaaagccgaaaattcaaaatacttatgttttggtaaaccgatgattattatgatttattgat  10806800  Previous    Next  AGI:  At1g30500.1    Description:  CCAAT-binding transcription factor (CBF-B/NF-YA) family protein. Identical to Nuclear transcription factor Y subunit A-7 (NFYA7) [Arabidopsis Thaliana] (GB:Q84JP1;GB:Q9S9P9); similar to CCAAT-binding transcription factor (CBF-B/NF-YA) family protein [Arabidopsis thaliana] (TAIR:AT2G34720.1); similar to YA6 [Antirrhinum majus] (GB:CAM12544.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) Range:  from: 10804434    to: 10806299    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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