Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->YAB1                                                           --------->ANAC58                                                           --------->ANAC58                                                      ---------->DOF2                                                <---------HSFB2a(1)                                                --------->HSFB2a(1)                                                --------->HSFC1(2)                          <--------                         --------->WOX13(1)     <---------HSFC1(2)                     --------->ALFIN1   agtctagtttcttcaatttgtcaagagcaatccaaactcaatttcaaagaattttccaaagaagcaattgtaaacttaagagccaacaagtgttgagatt  10789600                                                                           --------->ICU4                                                                           <---------YAB1<---------LBD16                                                                           <---------ATHB12--------->LBD16                                                                      --------->ANAC46  --------->MYB52(1)                                  <---------O2               <---------ZAT18  <---------WOX13(1)                           --------->GLK1(1)                 --------->ZAT18--------->ATHB12       --                           <---------GLK1(1)                <---------ANAC58<--------ATHB1<---------ATERF1(2)                          --------->ARR11(3)                <---------ANAC58--------->YAB1--------->ATERF1(2)                          <---------ARR11(3)   <-------TEIL<---------------AtSPL8   <---------ICU4 <- -TOE2(3)             ---------->DOF2 <------ZmHOX2a(1)    --------------->AtSPL8  <-------TEIL   <--   tagaagagacataccattactcgtaaaagatttctcacgaggagcgaggtacaccgatgtttgtgtaccaatacacaatgatggattcattaccggcata  10789700                                                                                                  <--                                                                                               <-----                                                                                               ------                           <-----------GT1                                                  <--------                        <----------DOF2                                                     ---------         ----------->RAV1(1)                                                                --------- ------------->AGL15   <---------ICU4               --------->AHL20(2)                     --------->AHL20(2) --------------AGL15 --------->GLK1(2)             --------->AHL20(2)   --------->YAB1----------->GT1 --------ID1        --------->YAB1          ----------->GT1--------->AHL20(2)       ----------->GT1   actacaaacagcaacaaaacaataatctttaacctatttcacaagggagaaaaataaaaaaaaaaatcaatttctcataaatcgaatagagaaaaaaatt  10789800                                                                  <---------RVE1(1)                                                                 <---------ARR11(3)                                                                 <---------GLK1(2)   <-------TEIL                                                  --------->ARR11(3)              <--- -------TOE2(3)                                                ----------->ARR10                <---- ----ATHB51                 -------->HAHB4                    <--------P                        <---- --->ICU4                   --------->YAB1            ---------->DOF2                         <------ -AHL20(2)                 <---------YAB1           <------ZmHOX2a(2)                         <------ >AHL20(1)                <---------TOE2(3)         =================================HOX2a_HOX2a<---- >AHL20(2)               --------->YAB1       --------->CCA1(2)<-------TEIL   <------ZmHOX2a(1)<-----   atggattcatcaattttgaaattcgattaatgataaaaacccatagagatttggatcaaagcaggtagattttttgtcgaggaaaaatttgggattttgg  10789900                   --------->YAB1         <---------HSFB2a(1)    ------>ZmHOX2a(1)            ----------->GT1    <---------HSFB2a(2)   <------ZmHOX2a(1)    =====================HOX2a_HOX2a    <---------AHL20(2)    --------->HSFB2a(2)  <----------ID1<---------AHL20(2)                                           - -----P  --------->HSFC1(2)      --------->ANAC46                                     ----------->RAV1(2) -----ANAC58      ===============HOX2a_HOX2a                                          --------->At4g35610 -----ANAC58      <------ZmHOX2a(2)    --------->AHL20(2)                             --------->ZAT2< ---TOE2(3)   <---------HSFB2a(2)--------->ANAC58       <----------ID1     ----------->GT1          - ---YAB1 <---------HSFC1(2) --------->ANAC58          <---------------AtSPL8          <---------At4g35610 ---GAMYB--------->HSFB2a(1)--------->ANAC58----------->GT1    ---------->DOF2       ------->TEIL   - ----MYB46(3) --------->HSFB2a(2)--------->ANAC58  --------->YAB1       <------ZmHOX2a(1)           -   ttgctcctcgaagcttctcgatcatagaggacgaaacgcaaataaatagtttataagaagaacaaaaaagatgaggaacgtgaatcgcacctgaagacta  10790000                         <------ZmHOX2a(2)                        <---------ARR14(2)           ----------->GT1          --------->ANAC58          --------->ANAC58 <----------DOF2         <---------------------WRI1     ---------->DOF2    --------->ARR14(3)    *TSS--------->MYB52(1)------>ZmHOX2a(2)                                                <---------GLK1(2) -------->ANAC58        --------->ARR11(3)                                    <---------ANAC58 ----------ID1          --------->ARR14(2)                                <---------MYB52(1)--------- -------->ANAC58        <---------ARR14(3)                          ---------->DOF2      --------->ANAC58 -------->ANAC46        <---------ARR11(3)                       --------->YAB1          --------->ANAC58 ---------->GT1     ---------->DOF2      ----------->GT1    <---------ATHB12  <---------ANAC58   aaacgcaaaaagacggaaaaaacaaagatctttcttagggtttatgtaaaattctcgcacaaatcaattttaaagcgttggcttctattgcaagaatcta  10790100                            <---------AHL20(1)                                           <---------ICU4                            <---------ARR11(3)                                           --------->YAB1                            --------->AHL20(1)                                        <---------AHL20(2)                      <------ZmHOX2a(1)                                          <---------AHL20(2)                     <----------ID1                    <---------AHL20(2)<---------YAB1 <---------YAB1                  ---------->DOF2                 <---------MYB52(1)    --------->ARR11(3)       <---            --------->AHL20(2)                  <---------DEAR3(2)     --------->YAB1<---------AHL20(2)            --------->AHL20(1)                ---------->ID1   ----------->RAV1(1)   --------->AHL20(2) >GLK1(2)   <---------AHL20(2)        <----------DOF2 <---------AHL20(2)<---------ARR11(3) <---------YAB1   aatagcccagaaaataaaataaaaggacaaaatatttctcctttgtttgtcggttttttattttccaacaaaatgatatttgttttatttattattacta  10790200                                                                                                <----                                                                                      ----------->GT1                                                                                     --------->RAP2.3(1)                                                                                     <------NtERF2                                      ------>ZmHOX2a(2)                             ------>NtERF2                                     <------ZmHOX2a(2)                              <---------ORA47(2)                                    <---------ARR14(2)                              <---------RAP2.3(1)                                    <---------ARR14(3)                              <---------DEAR4(2)                                    <-----------ARR10                               <---------ERF1                                    <---------AGP1                                  <---------ATERF1(1)                                    --------->AGP1                                 <---------DEAR3(1)                                    --------->ARR14(2)                             <---------RAP2.3(2)                                    <---------ARR11(3)                             --------->ATERF1(2)                                    --------->ARR11(3)                             <---------ATERF1(2)                                    --------->ARR14(3)                             <---------RAP2.3(3)               <---------AHL20(2)  <---------CCA1(2)                               --------->DEAR3(1)           <---------AHL20(2)      <---------ARR14(1)                             --------->ATERF1(1)           --------->AHL20(2)   --------->At4g35610         <---------MYB52(1)    <---------ABI4(1)<-           --------->ICU4       <---------At4g35610        --------->At5g28300  <---------ATERF1(2)<-      ----------->GT1 --------->TOE1(3)          ---------->DOF2                --------->ATERF1(2)<-     ------>ZmHOX2a(2)--------->TOE2(3)<----------DOF2     --------->LBD16     <---------LBD16  <---- ------TOE2(3) --------->AHL20(2) ----------->ARR10       ----------->GT1  <----------DOF2     ------   aggctgatcggaaaaaattaaaaaccctaatttgagcagatctttccaattgaaagcgaaccgtgaattttgagtctctttaccggcggcgaaaaaatgc  10790300                             ------>MYB83                            --------->ORA47(1)                            --------->MYB55(1)                           --------->MYB46(3)                           <---------MYB55(2)                           <---------MYB46(2)                           --------->DEAR4(1)                           ------->GAMYB                           ----------->HVH21                           --------->DEAR3(1)                           --------->DREB2C(2)                           <---------MYB111(2)                       --------->MYB46(3)                      ------>ZmHOX2a(1)                 ------>ZmHOX2a(2)                =============HOX2a_HOX2a                <------ZmHOX2a(2)               <---------ARR11(3)               --------->ARR14(3)               <-----------ARR10               --------->ARR11(3)                                 <---------MYB52(1)               --------->ARR14(2)                               <---------ANAC58               <---------ARR14(3)                               <---------ANAC58          --------->ANAC46--------->DEAR3(2)                    <---------ANAC46                   <-         <---------LBD16<---------ALFIN1  --------->GLK1(1)------>ZmHOX2a(1)                       -- -----ANAC58   <---------ARR14(2)    <---------YAB1   --------->HSFB2a(1)         <---------MYB59 --- -----MYB46(1)<---------GLK1(1)    --------->YAB1     <---------HSFC1(2)  --------->ANAC58        --- -----MYB83   --------->GLK1(1)   --------->ICU4      <---------HSFB2a(1) --------->ANAC58        --- --------ANAC46--------->AGP1------>MYB46(1)          --------->HSFC1(2) --------->WOX13(1)     <---- -----ANAC58 ----------->ARR10    <---------ATHB12  <---------ARR14(2) --------->WRKY18(1)      ----- --->ATHB12--------->LBD16--------->MYB46(3)        --------->ARR14(2)<-----------HVH21      <-------   ttggtggattatacggagatcttcctccaccgaccgatgatgagaaacccagtggaaactcctcttccgtctggtcaagcagtaccaaaatggctccacc  10790400                                                                                          <---------ATERF1(1)                                                                                      --------->ANAC58                                       --------->YAB1                                 --------->ANAC58                                       --------->TOE2(3)                              --------->ANAC46                                      <<<<<<<<<ARR2                              --------->LBD16            --------->MYB52(1)        <<<<<<<<<ARR1                              <---------SPL7           --------->AtMYB61     --------->ANAC58                               <---------ANAC46        --------->ANAC58     --------->ANAC46                                 ------>NtERF2 --------->ANAC46            --------->ANAC58                                ------------------>SPL14 --------ALFIN1              --------->ANAC58              --------->TOE1(3) <---------ARR14(2) ------->REM1(1)             --------->LBD16               --------->TOE2(3) --------->ARR14(2) --->MYB83<---------MYB55(2)<---------LBD16                <---------MYB59  <---------At4g35610    -- --->MYB46(1)         <---------At4g35610              ------->GAMYB       <---------RAP2.3(1)  ----- ----->P--------->ANAC58  <---------ALFIN1            --------->MYB46(3)  <---------RAP2.6(2)  <----- -----MYB111(1)   <----------DOF2--------->ANAC58     <---------MYB52(2) --------->RAP2.6(3) ------>ZmHOX2a(1) ---->AtMYB61 <---------ALFIN1--------->LBD16<---------ARR11(3)    ------>MYB46(1) --------->SPL7  -- --ALFIN1 --------->MYB46(3)--------->LBD16  --------->ARR11(3)    ------>MYB83<------NtERF2<--------   tacacttcgcaaaccaccagcttttgctcccccgcaaacaatcttaagacctctcaacaaacctaaacctatcgtttcggctccgtacaagcctcctcct  10790500  Previous    Next  AGI:  At1g30475.1    Description:  similar to EMB1303 (EMBRYO DEFECTIVE 1303) [Arabidopsis thaliana] (TAIR:AT1G56200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45180.1) Range:  from: 10788208    to: 10789925    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g30480.1    Description:  DRT111 (DNA-damage-repair/toleration protein 111); nucleic acid binding / nucleotide binding. Identical to DNA-damage-repair/toleration protein DRT111, chloroplast precursor (DRT111) [Arabidopsis Thaliana] (GB:P42698;GB:Q9S9Q1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40417.1); contains InterPro domain Splicing factor, SPF45 (InterPro:IPR016967); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain D111/G-patch; (InterPro:IPR000467); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 10790004    to: 10792557    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version