Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <------MYB83                                                                                   --------->MYB52(2)                                                                                   <------MYB46(1)                                                                         <----------DOF2                                                                       <---------ZAT18                                                                  <---------At4g35610                                     ----------->GT1              <---------ZAT2   <---------MYB46(3)                                  --------->ZAT2          <---------ANAC58        <---------AtMYB61                                  <---------ZAT2          <---------ANAC58       <--------P ------>PCF5           <---------ANAC46<--------P   <---------At4g35610<---------ZAT14              < -ARR14(2)      --------->KAN4(2)--------->GLK1(2)  --------->At4g35610--------->ZAT14   <----------DOF2 >ARR14(2)    ------->TEIL  ---------->DOF2    <---------At4g35610--------->ZAT2<-------GAMYB    <---   gtccccttcttccatgtatattctctcgtataaagaagctggtaacttctgcttagctgttcttgtctagctgtgctcttggggttggtttcttttcttc  10759100                                                                                               ------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                         <------MYB83                                                                                         <---------ANAC46                                                                                         <------MYB46(1)                                                                                    <-----------RAV1(1)      <---------YAB1                                                                <---------MYB46(3)     <---------AHL20(1)                                                          <-----------RAV1(1)    <---------ICU4                                                              ------>ZmHOX2a(2)   --------->ICU4                               <---------ARR14(2)             <------ZmHOX2a(2)   <---------YAB1                --------->CCA1(2)                            <---------ARR14(2) --------->YAB1         <-----------RAV1(1)     --------->GLK1(2)             --------->ARR11(3) ---------YAB1        <------MYB46(1)          <---------GLK1(2)              <---------ARR11(3) -------DOF2          <------MYB83 <---------TOE2(3)                          --------->ARR14(2)   ttttcattattttttgtttgaatttggtgttggagataagattatttgagattctgggtttctagtggttttgctcaagggatctgttgttgggtttagg  10759200                                                                                                -----                             --------->ALFIN1                                                 <------        <---------ZAT6 <---------------AGL15            <---------MYB46(3)                  --------- ----->GT1            <-----------------AGL2  <----------DOF2                              <---------YAB1 ---TOE2(3)           --------->ANAC55(2)   --------->At4g35610                         <---------YAB1 -->MYB59          <---------MYB52(1)    <---------At4g35610                      ------>ZmHOX2a(2) ---TOE1(3) --------->MYB52(2)    ---------->DOF2    ------------>MYB.PH3(2)<------------CBF<--------   ttaatttctggtgttagttctgttactgaatgtggagaaaggaagcagctttaagtgtttgttagaatgtctgagtgaaattgatctgtttttattatta  10759300    ------>ZmHOX2a(2)  <---------ARR14(2)  <---------AGP1  --------->ARR14(2) ---->ARR11(3) ---YAB1                                                           <---------YAB1 >YAB1                                                       <---------TOE1(3)                  <---- -ICU4                ------->TEIL<----------DOF2            <---------TOE2(3)                  <----   tctcgatctgggttttgagggatgaatccaaagtttctttctatctgagaaactctgtacattagggttttgattttagttggagggagtttttttttag  10759400                                                                           ------>ZmHOX2a(2)                                                                    --------->TOE1(2)                                                                   <---------At4g35610                                                                   <---------ZAT2                                                                   --------->At4g35610  <----------DOF2                                                                   --------->ZAT2      <---------ANAC58                                                             <---------ANAC58          <---------ANAC58                                                             <---------AtLEC2  --------->ARR14(2)                                                             <---------ANAC58  --------->GLK1(2)                                                         <---------ANAC58 <------ZmHOX2a(2)  --------                                                         <---------ANAC46--------->ARR14(2) --------- -----TOE2(3)                      <---------GLK1(1)     <---------ANAC58<---------ARR14(2) <-------- -----TOE1(3)              <----------DOF2      ---------->DOF2   ------->TEIL <---------ARR14(2)   ggttttggaggctcaaatttccctagtttctttgttgaattctggtgagagaaagaatggcttgcatgaagctgggatccaaatctgatgctttccagag  10759500                     --------->ANAC55(2)                   <-----------GT1               <----------TaMYB80              <---------KAN4(2)           <------MYB46(1)        <---------ANAC58                              <---------ANAC58    <-----------RAV1(2)--------->WRKY12               <---------ANAC58                          <---- ->LBD16<---------ANAC58<---------WRKY18(1)         <-----------GT1             <---------At4g35610 >HSFB2a(2)<------MYB83----------->HVH21  <---------AHL20(2)                    --------->At4g35610 -HSFB2a(2)----------->GT1             --------->AHL20(2)                <---------YAB1         -----   acaaggccaggcttggtatattcacttgacctctctctgatttttatattgtattttcgttccaagtttgtgcttctaattgagcagactttggtctgga  10759600                     <---------TOE2(3)                     <---------TOE1(3)            <----------DOF2                                             <----------DOF2         <---------ARR11(3)                                   <----------DOF2    <----------DOF2 -----ARR14(2)  <----------DOF2    <----------DOF2---------->DOF2   ----------->HVH21   <----------DOF2 ---->ARR14(2)<-----------------AGL1      ----------->GT1--------->KAN4(2)  ---------->ID1   tttgagaccatggtctttcttttaaggcaaatagcagcattactgagttaaacaaagctcattcctttgtctgactttgtcttctttggtcttttgctaa  10759700                                                   --------->At4g35610           ----------->GT1                                              <---------LBD16              <-------TEIL                                     <-------GAMYB <---------At4g35610 --------->ANAC58                                    <---------ANAC46                   --------->ANAC46             -                                    <---------MYB46(3)   <----------DOF2----------->GT1            <-                             --------->ARR11(3)<---------ANAC46        --------->ANAC58            --    --------->ARR14(2)     <---------ZAT6    --------->ALFIN1  <---------At4g35610                 <- <---------TOE1(2)      ------>ZmHOX2a(1)   --------->ALFIN1   --------->At4g35610                 --   ttgcaggttttgcacaactggacttcctagtgatattgtcgttgaagttggggagatgtcttttcatctccacaaggtacaatttgttaaaacactctct  10759800                                                   --------->HSFB2a(2)                                                   <---------HSFB2a(2)                                        <---------ICU4                                        --------->ATHB12                                        <---------AHL20(2)                                        -------->HAHB4                                        -------->ATHB1                                        --------->ATHB51                                      <------                                       <---------ATHB12                              <---------ZAT14        <-----------RAV1(1)            <---------YAB1                            --------->ARR11(3) -------->ANAC46            <-----------GT1        --------->HSFC1(1)            <---------ARR11(3) --------HSFB2a(2)--------->ATHB51     --------->ICU4                           --------->RVE1(1) ------->HSFB2a(2)--------->ATHB12     <---------ATHB51                         --------->CCA1(1) --- --------HSFC1(1)<---------YAB1     --------->ICU4 <---------HSFC1(1)     ----------->GT1<---------ZAT6 ------->HSFC1(1)<---------AHL20(2) ------------>ATHB5            ------>ZmHOX2a(1)  --------->ZAT14   tctcgaaacactgtgggatattattgcatttatctggactaattattggtcttctagaatgttatgtccttcggcattgtaaatatctgtactgctaatg  10759900                                                                                               <-----        <---------YAB1                                                              <---------ANAC58        <---------ANAC46<-----------GT1                  ----------->GT1            <---------ANAC58 ---------->DOF2       <-----------GT1                  <---------ANAC46     <---------At4g35610 ---TOE2(3)  <------MYB83  <----------DOF2            <---------ANAC46  <---------MYB52(1)     <----- ---->TEIL   <------MYB46(1)                  <-----------GT1    --------->AHL20(2) <---------ANAC46   tatcaaagttgtgtttggtttctattttccttttcatacattgtgttttatcagtcttgtggataaaaaaaatcgttactgctgttccttgaaaatttgg  10760000  Previous    Next  AGI:  At1g30440.1    Description:  phototropic-responsive NPH3 family protein. Identical to BTB/POZ domain-containing protein At1g30440 [Arabidopsis Thaliana] (GB:Q9S9Q9); similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G03250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72130.1); similar to BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3 [Medicago truncatula] (GB:ABN08065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40402.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); Range:  from: 10759457    to: 10762376    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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