Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <---------CCA1(2)                                       --------->YAB1                                      <---------ATHB12                                   <---------ALFIN1                                  <---------ZAT18 >TEIL------>ZmHOX2a(1)         --------->ANAC58                                                 ---- ---ARR11(1)                    --------->ANAC46                                                ----- -->ARR14(2)                  <---------ALFIN1            ----------->GT1                       <---- ---ARR14(2)           <---------ANAC55(2)            <---------YAB1                <---------MYB52(1) --ARR14(1)            --------->ANAC55(2)         --------------->AGL15    --------->YAB1     <----- --CCA1(2)       <-----------GT1--------->ANAC58<---------ALFIN1           <---------YAB1 <---------GLK1(1)   ttcaactccttcatacttgtaacttacttaatccaccccactcataactcccacttaaaattgtaaaaaacaaaactttgatagtcgtttgggtttctcc  10690400             ------>NtERF2            ------->GAMYB            --------->DREB2C(2)            --------->RAP2.6(2)            --------->ANAC46                                                           --------->ARR14(2)           --------->MYB46(3)                               --------->MYB52(1)         <---------ARR14(2)         <---------ALFIN1                                 <---------MYB59             <---------MYB52(1)         --------->DEAR3(1)                              <---------At4g35610        <---------ANAC46         --------->AtMYB61                          ------>ZmHOX2a(2)               <---------ANAC58        <---------MYB55(2)                         <------ZmHOX2a(2)                <---------ANAC58        --------->MYB46(3)                         --------->GLK1(1)               <------NtERF2       ------>MYB83                               <---------ARR11(3)           --------->At4g35610       ------>MYB46(1)                ---------->DOF2    --------->At4g35610  --------->ALFIN1      --------->ANAC46     --------->ANAC58       --------->AGP1              <-----------RAV1(1)     --------->MYB46(3)  <---------At4g35610      --------->ARR14(2)        --------->ZAT2 ----->LBD16--------->DEAR3(1)  --------->ANAC58  <---------AGP1            <---------ZAT2 ---->HSFB2a(2)          --------->At4g35610      <---------ARR14(2)       --------->GLK1(2)    <---- -----HSFB2a(2)  ---------->DOF2--------->ANAC58  --------->ARR11(3) ----------->RAV1(1)   <<<<<<<<<TBF1 ----LBD16--------->ABI4(1)--------->ANAC58      <---------CCA1(2)  <----------ID1------>NtERF2 -----   agaaaaacccaccaccgccaaaagctcagaagccaagaaaaaaagaaacacagatctcgagctaactaaaacgacagaagctggtgccgtttcttcttct  10690500                                                                                     <-------PIF5                                                   --------->LBD16                   ------->PIF5                  ------>ZmHOX2a(2)               --------->HSFB2a(2)              ------->TEIL                 <------ZmHOX2a(2)               <---------LBD16                --------->ANAC58                 <---------GLK1(1)               ------>ZmHOX2a(2)              --------->ANAC58                <---------ARR14(3)              <------ZmHOX2a(2)             <---------ANAC58       <----------DOF2                         ------------------------>ANAC81<---------ANAC58      <---------ANAC58                         <---------ARR14(2)        --------->ALFIN1      <---------ANAC58                         --------->ARR14(2)      --------->CCA1(2) --------->ZAT2 --------->ARR14(3)           ----------->ARR10        --------->ARR11(3) --------->At4g35610             <---------YAB1--------->ARR11(3)     --------->ARR11(1) <---------At4g35610<-----------RAV1(2)    ---------->DOF2            <---------ARR14(2)           -- -----HSFB2a(2) --------->ARR11(3)      --------->AtLEC2              --------->ARR14(2)           <- ---->HSFB2a(2) <---------ARR11(3)  <---------YAB1<---------HSFB2a(2) <---------ARR11(3)      <------   ataagctggcttaatcgagatctcaggcgaagtatatgattaatgcaaagatcgggaaatgagaaacagagagatatggggcatgcacttgctcaactgt  10690600                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                <----           <---------ZAT14                                                                      -----           --------->ZAT18                                                                     ------           --------->ZAT14                                                       --------->ATHB12 <--           <---------REM1(2)   --------->CCA1(2)                      <-----------RAV1(1)     -------           <-------TEIL   ---------->DOF2       ---------->DOF2      <---------TOE2(3)     <--------- ------->HSFB2a(2)    --------->YAB1---------->DOF2               <---------AHL20(2) <---------AHL20(2) --------HSFB2a(2)   --------->KAN4(1)      ---------->DOF2     <---------YAB1--------->YAB1 <------- -----RAV1(1)       <---------KAN4(2)    --------->CCA1(2)    <---------AHL20(2)--------->ICU4<------   tgcagaacatgggtacacagagaataatcaaagatagacaaagatagaaagaaagagactgtttttatttttatgttgaagaatgattttttttttccgg  10690700                     <---------bZIP60(2)                     <---------DEAR3(1)                   --------->MYB52(1)                  ----------->HVH21                ======================bZIP_DOF                <---------O2                <---------ANAC58                --------->bZIP60(1)                <---------TGA1a                --------->ANAC55(2)                <---------ANAC55(2)                <---------ANAC46                <---------bZIP60(1)                --------->TGA1a                --------->O2             --------->DEAR3(1)            --------->RAP2.3(1)            <------NtERF2            --------->ATERF1(1)           <---------ATERF1(1)           ------>NtERF2           <---------RAP2.6(1)           <---------ORA47(2)           <---------RAP2.3(1)           <---------ERF1           <---------RRTF1(1)           <---------DEAR4(2)          <---------DEAR3(1)          <---------RAP2.3(3)          <---------ANAC46          --------->DEAR3(1)     --------->AHL20(2)          <---------RRTF1(3)     <---------AHL20(2)         <---------ABI4(1)       --------->ATHB12         --------->ATERF1(1)     --------->ATHB51 -------->ANAC58<---------ANAC58 <---------ICU4 -------->ANAC58<---------bZIP60(2) ------>MYB52(1)--------->bZIP60(2) -----MYB52(1)------>NtERF2     <---------YAB1 ---->DOF5.7(2)<------NtERF2  <--------HAHB4 --->LBD16<---------RAP2.3(2)<---------YAB1 -------DOF5.7(2) ----------->TGA1 -->HSFB2a(2)<---------DEAR3(1) --------->ICU4           ---------->DOF2 --GT1 --------->ANAC46      --------->ICU4           <---------At4g35610 --LBD16<---------RAP2.3(1)<----------DOF2--------->KAN4(2)     <-----------GT1 ---HSFB2a(2)----------->HVH21--------->YAB1          --------->At4g35610        *TSS              --   taacgaaatacggcggcgacgtgacggtgctataattatttgtttattcttctctctgctaaagttttacttacttctctctctctctctcttatttgaa  10690800                       <----------ID1                             <----------DOF2                 ---------->DOF2                               --------->ARR14(2)           >>>>>>>>>TBF1 ------------>CBF                      <---------ARR14(2)       --------->At4g35610                                  <---------ANAC58                     ----     --------->YAB1    --------->ANAC58               --------->SPL7                             <---   --------->GLK1(2)   --------->ANAC58              --------->MYB52(1)           --------->ANAC58   ------------------------>ANAC81               <------------------SPL14         --------->ANAC58 -- ------->YAB1 >>>>>>>>>TBF1                     ------->TEIL<---------ANAC58    ---------->DOF2  <---   atgagaatcagaagaagaagaaagaacgacaatggctgttttttgacccgaacccgaacggagcgggtctttgattttcttctaaagcaacttgttgttc  10690900       --------->ANAC55(2)       <---------ANAC55(2)                                                            --------->LBD16       --------->ANAC55(1)                   <---------At5g28300                     --------->HSFB2a(2)   <------ZmHOX2a(1)        <---------MYB52(1)                            <---------AHL20(2) ----->HSFB2a(2)       <---------At5g28300  <-----------GT1           --------->AHL20(2) ------HSFB2a(2)      <-----------GT1   <---------AHL20(2)            <---------AHL20(2)<---------GLK1(2) -------->DOF2<-----------GT1       <----------DOF2             <----------DOF2     <---------LBD16 ------YAB1  --------->AHL20(2) <-----------GT1                <---------DAG2<---------YAB1   tgaaaggacacttaatttactaatttaccccttatttcctttttatttacagtttgggactcgtgcctttttttaatttatgcttctcccgaatttcaaa  10691000                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                 --------->YAB1                             <--------                                                 -------->HAHB4                           <---------ANAC55(2)                            --------------->AtSPL8                                        --------->ANAC55(2)                     --------->AHL20(2)<---------TOE2(3)  <---------TOE2(3)           -------->HAHB4                     <---------AHL20(2)<---------TOE1(3)  <---------YAB1              --------->YAB1                 --------->AHL20(2)    <---------YAB1     <---------------AtSPL8     <---------YAB1         --------->DEAR3(1) <---------------AtSPL8     <---------MYB52(1)        --------->AHL20(2)      <---------ANAC58 <---------YAB1--------->YAB1  --------->ANAC55(2)         --------->AHL20(1)      <---------ANAC46--------->AHL20(2)      --------->YAB1       ----------->GT1 --------->YAB1      <---------ANAC58<---------AHL20(2)    --------->AHL20(2)  ---------->DOF2 --------->YAB1 <-----   <---------MYB52(1)--------->YAB1 <---------YAB1   <---------ANAC55(2)      --------->AHL20(2)   acttcgttgcgtcgtccatgtaattaaaattgagtactattatggttttaataatacgttatggtacaaaggaaaaaaaaaaaaataataatacgttatg  10691100           --------->YAB1       --------->AHL20(2)                                                                    <-------       --------->AHL20(1)                                                           <---------MYB46(3)       <---------AHL20(1)                                                        <-----------RAV1(1)    --------->YAB1                  <-----------GT1                            <---------ANAC55(2) --------->AtSPL3          ------>ZmHOX2a(2)                                   <---------ANAC46 ----------AtSPL8    <---------ANAC55(2)                                       <---------ANAC55(1) ----------AtSPL3    --------->ANAC55(2) <----------DOF2                       --------->ANAC55(2) --------->AtSPL8  <-----------GT1<---------ANAC58       --------->YAB1   <---------ICU4    <-------- ----YAB1 <---------AHL20(2)      <---------ANAC58      <---------YAB1   --------->ICU4     <-------- -MYB52(1)<---------YAB1 <---------ARR11(3)         <----------DOF2     <---------AHL20(2)  --------- ----TOE2(3)    <---------ZAT6 <---------CCA1(2) <-----------GT1       --------->YAB1  <---------REM1(1)   gtaccatcatatattatagtattacatgatcgtatttcttactcttttttttttctttgtcatagtagttttataaaaattatgtgttgttgtagatttt  10691200                                                                                         --------->ATHB12        <---------MYB46(3)                                --------->AHL20(1)            <---------YAB1  <---------At4g35610                                     --------->AHL20(2)           <---------ARR11(3)  <---------ZAT2                                          <---------AHL20(2)           --------->ARR11(3) --RVE1(1)                                  --------->ZAT18                           --------->CCA1(1) -GLK1(2)                                   --------->ZAT14                           --------->RVE1(1) -ARR11(3)            <----------DOF2       <---------ZAT18                     <------ZmHOX2a(1) >ARR11(3)  <---------WRKY18(1)             <---------ZAT14      ------->TEIL <---------TOE2(3)   tttcagctagtggatgaccaaaggcttttttatactagagttttagtgaactattgcaaataaaatgaatcaatttgttttaggaaaaatatcattgctg  10691300  Previous    Next  AGI:  At1g30330.1    Description:  ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor. Identical to Auxin response factor 6 (ARF6) [Arabidopsis Thaliana] (GB:Q9ZTX8); similar to ARF8 (AUXIN RESPONSE FACTOR 8) [Arabidopsis thaliana] (TAIR:AT5G37020.2); similar to ARF8 (AUXIN RESPONSE FACTOR 8), transcription factor [Arabidopsis thaliana] (TAIR:AT5G37020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40364.1); similar to auxin response factor 3 [Cucumis sativus] (GB:BAD19063.1); similar to unknown [Populus trichocarpa] (GB:ABK95163.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain Aux/IAA-ARF-dimerisation; (I Range:  from: 10685804    to: 10690781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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