Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------>MYB83                                         <---------MYB111(2)                                         --------->AtMYB61                                         <---------MYB55(2)                    --------->GLK1(1)                                         <---------MYB46(2)                    <---------GLK1(1)                                         <---------MYB111(1)               --------->ANAC58                                         --------->MYB46(3)                --------->ANAC58                                        --------->ANAC46                  --------->SPL7                                      --------->AtMYB61                  --------->SPL1(1)                                     --------->MYB46(3)                  --------->MYB52(1)                                    ------>NtERF2                       <---------SPL7                                   ------>NtERF2                        ----------->HVH21                                  ----------->HVH21                    --------->DEAR3(1)                             ------->GAMYB ------>MYB46(1)            <---------LBD16                            --------->MYB46(3)                        <------NtERF2                            --------->DEAR3(2)                       <---------ATERF1(1)            <               ------>ZmHOX2a(1) --------->LBD16     ----------->GT1 ------>NtERF2           <-------             <---------HSFB2a(1) ------>NtERF2      <------NtERF2    --------->LBD16        <--------             --------->HSFB2a(1) <------NtERF2 --------->ANAC46     --------->ANAC46       <---------RAP2.6(3)             --------->HSFC1(2) --------->RAP2.6(2)------>NtERF2    --------->DEAR3(1)     --------->LBD16       <-----------GT1    --------->ARR14(2)   --------->ANAC58    <---------LBD16        <---------ATERF1(2)   <---------MYB52(1)     <---------ARR14(2) <---------ALFIN1      --------->MYB46(3)     --------->ATERF1(2) ----->ZAT2  <---------HSFC1(2) --------->DEAR3(1)--------->DEAR3(1)<---------ALFIN1     <---------LBD16 ------ZAT2 <------ZmHOX2a(2)--------->DEAR3(1)--------->ANAC58------>ZmHOX2a(1)   <---------YAB1   <   gctctgttttttcgatccttccttcgcagaaccgccgcgaccaccaaacacgccgtcgtaaaatccttccccgccggacggaattctgaatgccggtaag  10664300                                            --------->HSFB2a(1)                                            --------->HSFC1(2)                                            <---------HSFB2a(1)                                   --------->LBD16                                  --------->DEAR3(1)                                 --------->RAP2.3(1)                                 <------NtERF2                                 <---------LBD16                                 --------->ATERF1(1)                                ------>NtERF2                                <---------ATERF1(1)                               --------->ATERF1(2)                               <---------ATERF1(2)                               --------->RAP2.3(3)                               --------->RAP2.3(2)                               --------->DEAR3(1)      <---------MYB52(1)      --------->ATERF1(1)              --------->ARR11(3)     --------->LBD16          --------->RRTF1(1)       --------->At4g35610    <---------ANAC58          --------->ERF1<---------HSFC1(2) <---------ARR11(3)    <---------ANAC55(2)       --------->RAP2.3(1)  --------->LBD16    <---------ANAC55(1)       --------->DEAR3(2)  <---------HSFB2a(2)    --------->ANAC55(2)      <---------At4g35610  --------->LBD16    <---------ANAC58         --------->At4g35610 <---------LBD16                                    - ---------ANAC58             <---------ATERF1(1) --------->HSFB2a(2)                               <- -P <---------ANAC46--------->ANAC58      ---------->DOF2      --------->GLK1(2)                   <- -MYB52(1)          --------->ANAC46   <------ZmHOX2a(1) ----------->GT1                         <--- ---------ANAC58    --------->ANAC58<------NtERF2<---------HSFB2a(2)  <---------ANAC46          -----   tttcttccgtgagatttagaagacgcaagagagccgccggaggagaaagttcccggaggctgaaaaatctcgtcgtagaaacagtcggaacgagagaagt  10664400                                       --------->DEAR3(1)                                      --------->RAP2.3(1)                                    --------->DEAR3(1)                                   --------->DEAR3(2)                                   --------->MYB46(3)                                  --------->SPL7                                 <---------PCF5                                 <------NtERF2                                 ------>NtERF2           <---------ANAC58     <---------SPL7           <---------ANAC46     ----------->HVH21           <---------LBD16    --------->At4g35610                   --------->ARR14(2)           <---------ANAC58   <------NtERF2                         <---------ARR14(2)          <---------LBD16     <---------At4g35610                 ----------->ARR10  <------NtERF2               ------>NtERF2                      <------NtERF2 --------->LBD16              --------->ATERF1(1)             --------->LBD16              --------->ANAC58 -------->LBD16             <---------DEAR3(1)               <---------ANAC58              --------->ANAC58 -----NtERF2                <---------RAP2.3(2)              <---------ANAC58              --------->ANAC46 --------LBD16              <---------RAP2.6(2)             <---------LBD16        --------->ATHB12 ------DEAR3(1)            <---------LBD16          --------->ZAT14<---------DEAR3(2)<---------WOX13(1) ---->ATERF1(1)         <-----------HVH21         --------->At4g35610--------->CCA1(2) <-----------GT1   cgccggaaaattttcgggtgagaacgcttcgcggcggaccgccgaaaacatcagcgaagtcttccgcgtcgatacgagcatccattgatttacgagcaat  10664500                                           <-------TEIL               --------------->AGL15                                         --------->ARR11(1)           <----------DOF2                                         --------->ARR14(2)          <-----------------AGL3                                         <---------ARR14(2)   ------->TEIL                --------->LBD16                                         <---------GLK1(2)    --------->GLK1(2)         <---------LBD16                                       ----------->ARR10  --------->At5g28300          --------->MYB52(1)                                  --------->ANAC58       ----------->GT1             <------ZmHOX2a(2)           <---------WRKY12       --------->ANAC58       --------->LBD16            <-----------HVH21           <---------WRKY38(1)    --------->ANAC46      <---------DEAR3(1)       <------NtERF2     --          <------ZmHOX2a(2)      --------->SPL7        <---------LBD16<---------------AGL15 ---------   ggagaagaatggatcaacgcttaaacccatcttcatacgccaagattcgtccatttcgccggtgaatctttcctttttttggctccgatcaccggaaagt  10664600                                                                  <-------TEIL                                                                  ------->TEIL                                                              --------------->AtSPL3                                                             --------->MYB52(1)                                                           <---------MYB52(2)                                                         --------->ZAT6                                                        <---------ZAT14                                                        --------->ZAT18  <---------AHL20(2)             <----------ID1                             <---------ZAT18  --------->AHL20(2)          --------->DAG2                            <---------------AtSPL8            ----------->GT1 ----------->GT1                                    *TSS--------->ZAT14  <-----------TBP      ------- -------->DOF2        ---------->DOF2               --------------->AtSPL8<---------YAB1     -------- ->DOF2  ---------->DOF2      ----------->GT1 <---------AtLEC2<---------TOE2(3)     <------------CBF   ctaaagaaaaaaaaagcgacgaagtaaagagagtgtgatatgtgttttgtatgaaatgtacactaacgtacatatttttatagtagcattgaaaaaaaag  10664700                                                                                             --------                                                                                      <---------TOE2(3)                                                                                     --------->YAB1                                                                                     <---------ICU4                                                                                    --------->ICU4---                                                 <---------DAG2           --------->ICU4  <----------       <----------DOF2                           <----------DOF2        ---------->DOF2----------->GT1 -->DAG2                          <---------AHL20(2)         ------>ZmHOX2a(1)    --------->YAB1 <--- -->DOF2                  --------->ALFIN1<----------DOF2  ----------->RAV1(2) ----------->GT1-------   tttttttttctttaaactaattcttcatgtgtggattttattcgctttcaacttttttttctcctggtctgaaataaagatgagtaataatgttactagt  10664800         <---------AHL20(2)    <---------YAB1   <---------AHL20(2)   --------->AHL20(2)  --------->AHL20(2) ------->AGL15                          --------->ALFIN1                --------->AHL20(2) ------>AHL20(2)               ----------->GT1             --------->YAB1<---------AHL20(2) -GT1   --------->AHL20(2)     <---------ZAT6            --------->AHL20(2)  <-----------GT1 ------AHL20(2)              <---------ANAC46  ----------->GT1 --------->GLK1(2)                <---- ---->GT1--------->AHL20(2)<---------ZAT14     <---------MYB46(3)   <---------YAB1            <------   taaattaaaattaaaatatagaatataagtttagtgtaatatgtgtggattgttaacaaaataataatctatgatttattcacaaaatgtattgtagtat  10664900                            --------->AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)                       --------->YAB1                        <---------AHL20(2)                          <---------ICU4                 <-                       --------->AHL20(2)                        --------->WOX13(1)               ---                 ----------->GT1                        <---------TOE2(3)                         <--    ----------->GT1    <---------AHL20(2)              <---------ICU4                         ------- >>>>>>>>>EIN3<---------AHL20(2)                       --------->YAB1                         <------ -----YAB1--------->AHL20(2)--------->AHL20(1)        <---------ATHB51      ----------->GT1------->TEIL ---ZAT6  <---------AHL20(2)<---------AHL20(2)      --------->YAB1 <---------ATHB12  <---------AHL20(2)   tatacattgtatatatataatgtaattaaataatttgatatgtttttgtgtcaacaataatgtttttcaatcataacattgttatatataatgtatttaa  10665000       <----------ID1     --------->ZAT6   --------->YAB1 --------AHL20(2)                                                                 <---------AHL20(2) ------>AHL20(2)                        <-----------GT1                          --------->AHL20(2) -------AHL20(2)                   ----------->GT1      ------>ZmHOX2a(1)     --------->ATHB12 -->AHL20(2)                     <---------ANAC58  <---------GLK1(1)         <---------YAB1 ---AHL20(2)        ------->TEIL <---------ANAC58  --------->GLK1(1) --------->YAB1              <---   ttaaataatactacaaataatgtatttggctcaaggcttgttataccacttggagttcctagtccctactatcaaaaacatgatttaatggtttccgaac  10665100                                                                                                -----                                <----------ID1                                                  <----                                --------->ANAC46                                              <------                      <----------DOF2                                                         <------                <---------ARR14(2)                                                          ---------                <---------GLK1(2)                                           ----------->HVH21 <------                --------->ARR14(2)     ----------->GT1  <---------TOE2(3) <---------ANAC58  <--------      --------->At4g35610       --------->ANAC58 <---------ICU4           <---------ANAC58  ---------      <---------At4g35610       --------->ANAC58<---------YAB1      <---------YAB1      ------>ZmHOX2a(1) -------DOF2 --------->YAB1 <---------AHL20(2)--------->YAB1     <---------MYB52(1)<---------ZAT18   ttttgttgagctgtatcatattctctttatttatacgaaaaatgtaattcatcattttaagttttctgttatttttgggtgatagtgctcctagtggagt  10665200  Previous    Next  AGI:  At1g30280.1    Description:  heat shock protein binding. similar to JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1), heat shock protein binding [Arabidopsis thaliana] (TAIR:AT1G75100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40358.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) Range:  from: 10662647    to: 10664652    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g30282.1    Description:  other RNA Range:  from: 10663316    to: 10664747    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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