Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ----------->GT1      --------->ANAC55(2)      <---------ANAC55(2)      <------MYB83      <------MYB46(1)     --------->MYB111(1)     --------->MYB46(2)     --------->MYB59                                                     <---------AHL20(2)   <---------MYB52(1)                                            ----------->GT1   <<<<<<<<<MYB98              <-----------GT1                 ---------->DOF2                  <---- <---------TOE2(3)           <---------AHL20(2)          ---------->DOF2 --------->AHL20(2)<---------ANAC58 --------AHL20(2)        --------->ICU4                 --------->AHL20(2)                 <---------ANAC58 --->AHL20(2)      <---------------AtSPL8     <-----------GT1--------->ARR11(3)         <-----------RAV1(1) ---YAB1           --------------->AtSPL8 <---------YAB1<---------AHL20(2)         xxxxxxxxxxxxxxxx>smallRNA(i) ---AHL20(2)    <---------AHL20(2)      <---------AHL20(2)<---------TOE2(3)        <----------DOF2 <-   tttaagttaggtaagaatttttttgtactaatttatctgtttttatttttacgagaaattaaagataaagaaaaatttataaattctttactgtcgttct  10654500                                        --------->YAB1                             ----------->GT1                             <------MYB83        <---------AHL20(2)                      <---------At4g35610                             <------MYB46(1)    <---------AHL20(2)                       --------->At4g35610                           <--------P <---------ARR11(3)                            <---------YAB1 --                          <-------GAMYB<---------YAB1<---------AHL20(2)           --------->YAB1   --                     --------->KAN4(2)--------->ARR11(3)                          <---------ICU4   --    <----------DOF2<---------YAB1    --------->CCA1(1)                           --------->ICU4<----- ------DOF2      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----------GT1          --------->AHL20(2)   -- ----------GT1 <---------MYB52(1)    --------->RVE1(1)  <----------DOF2       <---------AHL20(2)  <--   ttaactcttttgaaatcgttgattattcggttggagaaaatatcatattttttattttctttttcgaaattttgttttaaaaaattatgacagctaatta  10654600            ----------->GT1      <---------AHL20(2)           --------->DAG2        --------->AHL20(2)    ----------->GT1    <---------AHL20(2)  <---------ANAC46     <-----------GT1 ------->ANAC55(1)  <---------ICU4 <---------YAB1 ------->ANAC58    --------->AHL20(2) ------->ANAC58   <---------AHL20(2)                                             <-------TEIL ------GT1---------->DOF2 <----------DOF2                --------->ICU4--------->YAB1 ------->ANAC46   <---------AHL20(1)              <------ZmHOX2a(1)    <-----------GT1           <--- -------LBD16     --------->AHL20(1)          ---------->DOF2         --------->MYB46(3)         ----   cacggcatgtaaaaaagtaaaatatttacttttatttatatttgataaaaaaggatgacataattttctgtaatcaccataagtccataacgtttgcatt  10654700                                                                                  --------->TOE2(1)                                                                                  --------->TOE1(1)                                                                 ------>MYB83 ------>MYB83                                                                 ------>MYB46(1) ------>ZmHOX2a(1)                                                        --------->TGA2(2)     ------>MYB46(1)                                                       <-----------HVH21   <---------HSFB2a(1)                                 <---------AHL20(2)    <-----------TGA1    --------->HSFB2a(1)                                --------->AHL20(2)    --------->ANAC58     --------->HSFC1(2)              <---------TOE2(3) <---------AHL20(2)    >>>>>>>>>>ABI5       <---------HSFC1(2)      ---------->DOF2        --------->AHL20(2)       --------->ANAC58 <-------TEIL   <----------TaMYB80    <---------YAB1        --------->YAB1           --------->ARR14(2)<---------ARR14(2)             < ------AHL20(2)  --------->CCA1(2)    ----------->GT1 --------->ANAC46--------->CCA1(2)          ---- ----->AHL20(2)--------->YAB1--------->ATHB51      <---------ARR14(2)--------->ARR14(2)   -----------   taaattatcaaagactaagataagcctagaataatttaaaatgtaaactatagtatacgtcagaacctacagatacaaccttcctcgtataatccctaaa  10654800          <-----------GT1         <---------AHL20(2)         --------->AHL20(2)     --------->AHL20(2)     <---------AHL20(2)     <---------YAB1 ------>ZmHOX2a(1)    <---------AHL20(2)                            <---------AHL20(2)    --------->AHL20(2)                           --------->AHL20(2)   --------->YAB1  --------->TOE1(3)       <-----------GT1              ------------>CBF          <-- ---------GLK1(2)  --------->TOE2(3)      <-----------GT1              --------->YAB1            <--- ----->YAB1<-----------GT1               <---------AHL20(2)    --------->AtMYB61           <---------ANAC58 ------>AGL2 <---------ICU4   <-----------GT1 <----------DOF2 --------->MYB46(3)  *TSS     <---------ANAC58   cagaattttaattaaacatttccttaactaatttacttcttaatttaacttttaaattccttccaccatcgaatcacaatctctctctctctcgcttgct  10654900                                                                <---------HSFC1(2)                                                                --------->HSFC1(2)                                                           <---------HSFB2a(2)                                                           --------->HSFB2a(2)                  --------->DEAR3(2)                      <---------LBD16                --------->ARR14(2)                  <---------YAB1             <---------HSFB2a(2)                   <---------TOE2(3)             --------->HSFB2a(2)            <---------RAP2.6(3) --------->HSFB2a(1)      <----------DOF2                      --------->RAP2.6(2)  <---------HSFB2a(1)      <---------DAG2                     <---------At4g35610  <---------GLK1(2) -------MYB52(1)<---------ARR14(2)       --------->At4g35610--------->LBD16 ----GAMYB  <---------LBD16        ---------->DOF2<-----------GT1 <-----------GT1                  <-   gttactcgctttttcccagaaccggcttcgatttttctaaagcagccgaaatttacgattcccagaattttccctactgacaaaatttcacttcaaatac  10655000                                                   <---------TGA1a                                                   --------->ANAC58                                                   --------->ANAC46                                                   --------->TGA1a                                                   <---------O2                                                   --------->ANAC58                                                   --------->O2                                               <---------ALFIN1                                              --------->LBD16                                              --------->ZAT14                                              --------->At4g35610                                              <---------At4g35610                                              <---------ZAT18               <---------MYB46(3)     --                                            <---------LBD16               <---------At4g35610     <--                                          ------------------>SPL14      <---------RAP2.6(2)  <------- ----------ARR10     <<<<<<<<<TBF1        <-----------GT1        <---------YAB1           <---------LBD16   aaatctcgtcttcatgagtcttcttcttcgtccaaattgaattttctccgcacacgagagttgaattttgattttcggctgtttatatggtctccggtcc  10655100                       ------>ZmHOX2a(2)                      --------->GLK1(1)                      <---------GLK1(1)                                                 =============                      <------ZmHOX2a(2)                                                 =============                     --------->ARR14(2)                                                 <---------YAB1                     <---------ARR14(3)                                                 ------>ZmHOX2a(1)                     <---------ARR14(2)                                               ----------->RAV1(2)                     <---------AGP1                             --------->ANAC58     ================                     --------->ARR11(3)          --------------->AGL15               ------>ZmHOX2a(1)                     <---------ARR11(3)         <-----------------AGL1               ================       <---------AHL20(2)      <----------CDC5  ----------------->AGL3              <---------ALFIN1 ------->STY1(1)    <---------CCA1(2)       <---------GLK1(1)   --------->ANAC58  =================== -------MYB52(1)    <---------At4g35610     --------->GLK1(1)   --------->AtLEC2  =================== ----HVH21       <---------At4g35610 <-------GAMYB          <------NtERF2         ------>ZmHOX2a(1)   cttagggttttaattcttctgcagatctctcacgatgagcgttgcgaaatcccaagtatggcagccatgcaagaagaagaggtcctcctcctgattcaat  10655200              <---------AHL20(2)              --------->AHL20(2)            <---------AHL20(2)            --------->AHL20(2)   ------>ZmHOX2a(2)  <------ZmHOX2a(2) <---------ARR11(3) --------->AGP1 --------->ARR11(3) >>>>>>>>>GATA-2 >>>>>>>>>GATA-1 >>>>>>>>>GATA-3                                                  --------->ANAC58 >>>>>>>>>GATA-4                                          <---------HSFB2a(2)                <------- =========HOX2a_HOX2a                                     <---------HSFC1(1)                 <------- ========HOX2a_HOX2a               --------->AHL20(2)     --------->HSFB2a(2)               <------ZmHOX2a(2) =========HOX2a_HOX2a              <---------AHL20(2)     --------->HSFC1(1)         ==============HOX2a_HOX2a ========HOX2a_HOX2a           --------->CCA1(2)      <---------ANAC58       <------ZmHOX2a(2)  ----- ========HOX2a_HOX2a          --------->ARR11(3)      <---------ANAC58       ===============HOX2a_HOX2a =========HOX2a_HOX2a         <---------ARR11(3) --------->CCA1(2)--------->ANAC58   ------>ZmHOX2a(1)   agagatctatctatatatatataagagaccgagatatatatatagagagagagatggcttctcgaacaacgccttcacgatcgactccttcacgatcaac  10655300                     <--------P                   <---------MYB46(3)                                                  <---------GLK1(2)         --------->ARR11(3)       ----------->GT1                      <---------HSFC1(2)       <---------MYB46(3)         <------MYB46(1)                      --------->HSFC1(2)      <--------P   --------->MYB55(2)                                  <---------HSFB2a(1)     <---------MYB52(1) <------ZmHOX2a(1)                    <---------ANAC46          --------->ARR14(2)   <---------HSFB2a(2) <------MYB83                          <---------ANAC58    ----------->GT1   --------->HSFB2a(2) <------MYB46(1) --------->ICU4        <---------ANAC58   <---------TOE2(3) --WRKY12<---------ARR11(3)     <--------P   --------->ZAT2 <---------MYB46(3)  <---------TOE1(3) --WRKY38(1)      <---------AtMYB61 <--------P           <----------DOF2<----------DOF2<---------ARR14(2) ---->ANAC46   <-----------RAV1(1)<------MYB83         ------->TEIL    --------->HSFB2a(1)         --   gccttctggtagttcttctggtggtaggacacgagttggtaagtatgagcttggacgaactttgggtgaaggaactttcgctaaggtcaaattcgctaga  10655400  Previous    Next  AGI:  At1g30270.1    Description:  CIPK23 (CBL-INTERACTING PROTEIN KINASE 23); kinase. similar to CIPK9 (CBL-INTERACTING PROTEIN KINASE 9), kinase [Arabidopsis thaliana] (TAIR:AT1G01140.1); similar to CBL-interacting protein kinase 24 [Populus trichocarpa] (GB:ABJ91230.1); similar to CBL-interacting protein kinase 25 [Populus trichocarpa] (GB:ABJ91231.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72580.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR01 Range:  from: 10654882    to: 10658881    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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