Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------RVE1(1)             <---------GLK1(2)                --------->ARR11(3)             --------->ARR11(3)              --------->ATHB12             <---------ARR11(3)              <---------ICU4       <----------DOF2    ---------->DOF2                         <---------YAB1 <---------HSFB2a(2)   --------->AHL20(2)                       <---------ATHB12    --------->HSFC1(2)   <---------AHL20(2)                       --------->ICU4 --------->HSFB2a(2) ----->LBD16<---------RVE1(1)              <---------TOE2(3)    <---------HSFC1(2)                ---   agaaattaaaggagagatttttaagtgaagaagatgaacaagactaatgattttgttcttgctagaagctttgccctaaattacatggcagtttgcaaaa  10630100               <---------AHL20(2)              --------->AHL20(2)          <-------TEIL      --------->ARR11(3)                          --------->ANAC58    --------->YAB1          <---------ARR11(3)                       -------->P  --------->GLK1(2)        <---------RVE1(1)---------->DOF2          ------>MYB46(1)  --------->ARR11(3)--------->DAG2     --------->AHL20(2)            ------>MYB83 <---------GLK1(2) ---------->DOF2     <---------AHL20(2)    --------->YAB1                        <- ------>YAB1--------->TOE2(3)    --------->AHL20(2)    --------->TOE2(3)--------->ANAC58  <----------DOF2   taagaatcttgatacattaaataaagcagagattttaaaatataaataaagggtttgcctcaaaaatcaccaacaagctaagagaaaactcactttggat  10630200                                               ----------->GT1                                         --------->RAP2.3(1)                                        ------>NtERF2                                        <---------ORA47(2)                                        <---------ERF1                                        <---------RAP2.3(1)                   <---------ANAC58                                       <---------ANAC46                       <---------ANAC58                        <---------ZAT14<---------RAP2.3(2)                  --------->GLK1(2)                 <---------ZAT2        <---------RRTF1(3)                  <---------ARR14(2)                 --------->At4g35610   <---------RRTF1(2)                  --------->ARR14(2)                 <---------At4g35610   <---------DREB2C(2)                 <---------GLK1(2)                 --------->ZAT2        <---------RAP2.3(3)    <---------AHL20(2)          ------->GAMYB --------->REM1(2)<------NtERF2        --------->AHL20(2)        <---------At4g35610            <---------ATERF1(2)   --------->AHL20(2)        --------->At4g35610            <---------RAP2.6(2)   <---------AHL20(1)    <-----------HVH21   --------->ZAT14<---------DEAR3(1)    --------->AHL20(1)                 <---- ----------RAV1(2)   <---------ANAC46  --------->ATERF1(2)   <---------AHL20(2)               <------   tacaggtgtcaactgtctaagctcagtgtagaacaacaatggcggcgataagtgaaaaacaaatttaattttcttcagattcttgtcatgagcttcttat  10630300                                                                    <--------ATHB1                                                                    --------->YAB1                                                                   <---------ATHB51                                                             ------>ZmHOX2a(2)                                                            --------->CCA1(2)                                                            <------ZmHOX2a(2)                                                           <---------ARR11(3)                                                           --------->AGP1                                                           <---------ARR14(2)                                                           --------->ARR11(3)                            <XXXXXXXXXXXXXXXXXXXXMIR868    <---------AGP1                           --------->YAB1                ----------->ARR10                          <---------YAB1            --------->CCA1(2)                      <-----------TGA1              <------ZmHOX2a(2)                   ------>ZmHOX2a(2)               --------->AGP1  <---------ATHB12                  <------ZmHOX2a(2)                --------->ARR14(2)                 --------->ARR11(3)                --------->ARR11(3)                 <---------AGP1                    <---------ARR14(2)                 <---------ARR11(3)                <---------ARR11(3)  ----------->GT1          <---------YAB1  --------->ICU4    ----------->GT1--------->ARR14(2)             --------->ANAC58 -----CCA1(2)   <---------CCA1(2)           <---------ZAT6<---------CCA1(2)    --------->YAB1   ----- ---CCA1(2)    ----------->ARR10 <---------ICU4  ----------->ARR10 --------->ICU4         --------->ANAC58   ctcttccttctcatgcttagatctcgtcattataagcattagagaagtgttaagatccacagatctgcaataatagttatatcaaaatagtcacacaaat  10630400                                                                        <------ZmHOX2a(1)                                                                      --------->LBD16                                                                     <---------LBD16        ---------                                                                    <---------LBD16   ---------->DOF2                                                              --------->ARR14(2)   --------->LBD16                                                              <-----------ARR10 --------->At4g35610         --------->TOE2(3)                  <------ZmHOX2a(1) <---------ARR14(2)<---------At4g35610 ---->YAB1            <-------TEIL  <---------ZAT6     ---------->DOF2<---------TOE1(2)--------->DAG2   ataagttataacataaaaaaaacattcgtttttgagtagtgttttaggacgtttagataaagagtattttcccaggaaaatcagccgagaaagtgaaaga  10630500                                                    <---------------AGL15                                                    --------------->AGL15                                                   ----------------->AGL1                                                   <---------ANAC55(2)                                                   --------->ANAC55(2)                                                 <-----------GT1                                             <---------AHL20(2)                                             --------->AHL20(2)                                     --------->CCA1(2)                         <---------ANAC58   --------->At4g35610              <---------ARR11(3)                         <---------ANAC58 ->DOF2               *TSS          --------->ARR11(3)<-----------HVH21    --------->At4g35610   aaattagcagaaaatgggaaatggggagagaggctagagatatgagttttattacctgttagagaaaaatatcaaacagttgccttcggacaagggaaga  10630600                             <---------ANAC58                             <---------ANAC58                             <----------DOF2  --------->ZAT18        <----------DOF2               <-----------GT1    <---------DAG2  <---------ZAT14     <-----------GT1               <----------DOF2<----------DOF2                 --  <---------ZAT18  <---------------AtSPL8    <-----------GT1   <----------DOF2              ---------  --------->ZAT14  --------------->AtSPL8<----------DOF2<-----------GT1---------->ID1       <--------   caagtgcactgtttggactattttgtactttccttgttctgttcttttctctctcttttacccttctttctttctcctttttcaattctgccactaaact  10630700                                                                                                    -                          <-----------GT1                                                           <                   <----------DOF2                                                                  <                ---------->ID1             <-----------GT1              --------->YAB1        ------- ------->YAB1 <-----------GT1        <------ZmHOX2a(2)              <---------ZAT14       --------->YAB1 >ZAT14    <---------ICU4 <---------AHL20(2)                        --------->ZAT14    <-----------GT1 -ZAT14    --------->ARR14(2)<----------DOF2                  --------->YAB1    ------->TEIL  <------   attagaatatcaatatttgcccttttattttctttttcgatcaatttgccctctattaatcgaattatactgaagtataatgtatgttttaatcatataa  10630800          --------->ZAT6                                                                         ----    <-------TEIL                                                                                 ---- -------->DAG2                                                                                   ---- ---------TOE2(3)                                     --------->TOE2(3)                   <---------- ---------TOE1(3)                                <-------TEIL                             ----------- -->AHL20(2)     <---------At4g35610     <---------KAN4(2)                             <-----------GT1 ---AHL20(2)   --------->REM1(1)       <------ZmHOX2a(1)   --------->AtLEC2       <---------AHL20(2)   ataaggttcatgacactacatctgataagacaatataactaggaataagcatacatccttgatgcaaatatagcctatattgttttaatttacattttca  10630900                                                                      ------->MYC3                                                                      <-------MYC3                                                                     ==================bZIP_DOF                                                                     --------->TGA1a                                                                     --------->O2                                                                     <---------TGA1a                                                                     ==================bZIP_DOF                                                                     <---------O2                                                                --------->ZAT18 ----->ANAC46                                                   <---------ZAT18       <---------At4g35610 ----->ANAC58                                              ====================bZIP_DOF  <---------HSFC1(2) ----->ANAC58<---------ANAC55(2)                           ---------->DOF2     ---------->DOF2 -----AGL15  --------->ANAC55(2)       ---------->DOF2 ----------->HVH21    <----------DOF2 ---->AGL15  --------->YAB1            ========================================bZIP_DOF  --------->HSFC1(2)   agaaacatctaacttacataatgtttcatgctatggtgaagaaaagacactctcgaggtgacaaagtggacacatgggcttcaaaggcagaagcttcact  10631000  Previous    Next  AGI:  At1g30210.1    Description:  TCP24; transcription factor. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT4G18390.1); similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT4G18390.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40343.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 10627169    to: 10630522    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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