Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ANAC55(2)                  <------MYB83                  <------MYB46(1)                  ----------->GT1                 --------->MYB59     <----------DOF2              --------->ATHB12   ------>ZmHOX2a(2)              -------->HAHB4    <---------GLK1(1)             <---------YAB1     --------->GLK1(1)             --------->ICU4    <---------ARR11(3)                                         ------>ZmHOX2a(1)           --------->YAB1      --------->ARR11(3)         <----------DOF2            <---------ZAT18 ---->DEAR3(1)--------->YAB1 <---------ATHB12         <----------DOF2            <-----------GT1   gaccaagagctagtaatgataggtaaaacaaatgatctcctttaaactccaaacctctttctttctcttactcttctagggttttagcgctcctctctct  10601800                                                                                         ------>ZmHOX2a(2)                                                                                   <------NtERF2                                                                                   --------->ATERF1(1)                                                                                  <---------LBD16                                                                                  ------>NtERF2                       --------->ARR14(2)                                       --------->ATERF1(1)                       <---------ARR11(3)                          ------>ZmHOX2a(1)   <---------ARR14(2)                       --------->ARR11(3)                --------->YAB1<----------DOF2 --------->ARR14(2)                       <---------ARR11(1)           <----------DOF2=============================HOX2a_HOX2a                       <---------ARR14(2)--------->AHL20(2)        <---------CCA1(2)--------->LBD16             <<<<<<<<<TBF1<----------DOF2<---------AHL20(2) --------->ARR14(2) <---------ATERF1(1)     <------------------------ANAC81    <---------AHL20(2)  <---------ARR14(2)<---------DEAR3(1)  <----------DOF2     <---------CCA1(2) --------->AHL20(2)  <---------GLK1(2)<-----------RAV1(2)   ctctctttcattttcttcttctccatatctttcactctcaaattaaattctagtctttttcatattctcctatcttttcgcaggcgcgggatcgtcatca  10601900                                                                <---------ANAC58                                                                <---------bZIP60(2)                                                                ==============================bZIP_DOF                                                                <---------ANAC58                                                                <---------TGA1a                  <---------STY1(1)                             <---------ANAC46                  --------->STY1(1)                             <---------O2             --------->DEAR3(1)                            ------>ZmHOX2a(2)          <---------ICU4                                 --------->ARR11(3)                        <-         <---------YAB1                         <---------ARR11(3)                                 --        --------->ARR11(3)         <---------AHL20(2)   --------->YAB1                         ------        <---------ARR11(3)        --------->AHL20(2)    -------->HAHB4               --------->ANAC58       --------->YAB1           --------->ARR11(3)     --------->ICU4              ---------->DOF2---      --------->ICU4            <---------ARR11(3)     <---------YAB1      ----------->GT1   <-------      <---------YAB1--------->ANAC46            --------->ARR11(3)    <----------ARF1--------->ANAC58   cctaggtgatgatcatcgccctaggccataaaaagatttaatatttgtaagagcttaatgatcgtgacttgggagagaagtaatacaaagccatagatta  10602000                                            <---------ANAC46                                           <------NtERF2                                          <---------MYB46(3)                                          --------->MYB55(2)                                         --------->ALFIN1                                         <---------ANAC46                                       <------MYB46(1)                                       <------MYB83                                       <---------MYB46(3)                                       --------->MYB52(2)                                      --------->MYB111(1)                                      <---------MYB46(3)                                      <---------DEAR3(1)                                  --------->DEAR3(1)                                      --------->MYB55(2)                                  <---------MYB46(2)                                      <---------AtMYB61                                  --------->ANAC46                                      --------->MYB111(2)                                --------->ANAC58                                     <--------P                                          --------->ANAC58                                     <---------MYB55(1)                                  --------->ANAC55(1) --------AHL20(2)                  --------->ATHB12                                <-----------GT1 ------->AHL20(2)                  <---------MYB46(3)          ------->GAMYB --------->YAB1 --->AHL20(2)                     <---------TOE2(3)         <-----------GT1--------->ANAC58       --- ------>AHL20(2)      <---------ATHB12--------->MYB46(2)   <-----------GT1 --------->ANAC58 ------>MYB46(1) --GLK1(2)  <---------ZAT6        <---------YAB1   <---------ANAC46        --------->ANAC46 ------>MYB83   tttaatttcttctggtgttattcaatgaagaagcttatggttggtggggggttttgtatatttaaccctcaaaccccaagcaaaataacacaccgaacta  10602100                           --------->ANAC58                                                ----------                    ------>ZmHOX2a(1)                                                   <---------At4g35610                --------->ARR14(2)                                                     ----------->RAV1(1)                <---------ARR14(2)        <-----------GT1     *TSS                   --------->At4g35610          ---------->ID1   --------->ANAC46                 <---------ARR11(3)       <------NtERF2        ----------->HVH21  --------->ANAC58            ------------>CBF  <---------At4g35610    <----      <----------DOF2 <----------DOF2 <----------DOF2 --------->YAB1     --------->LBD16--------->At4g35610 ------>ZAT6  ----------------------->TaNAC69(2)   <----------DOF2 <<<<<<<<<TBF1     <---------At4g35610   tcactcttctttgacgcttatcctctttcacgcttctcttctttcaaccttctctttcacaatgtcttcttcttccgctatcaaggctgcagcaaaagct  10602200                   --------->ARR14(2)                   <---------ARR14(2)                <---------TOE2(3)          --------->LBD16        ------>ZmHOX2a(2)        <---------LBD16                                                  <---------ANAC46        >>>>       <------ZmHOX2a(2)                                          >>>>>>>>>>DREB2A         --------->LBD16      --------->GLK1(2)                                           <---------RAP2.6(3)     --------->ANAC46      --------->ARR14(2)                  <------MYB83            <---------DDF1          <---------HSFB2a(2)     <------ZmHOX2a(1)                    <------MYB46(1)         >>>>>>>>>>DREB1A        --------->HSFB2a(2)    ----------->ARR10   <-----------HVH21<---------AtMYB61      --------->DEAR3(2)       <---------LBD16 >DOF2<---------ARR14(2)<---------SPL7<---------YAB1           <---------At5g28300     --------->ARR14(2) ------DOF2 <----------DOF2           <-----------RAV1(1)      <---------DOF5.7(2)     <---------ARR14(2)   ttggagaggatccgcattatggatactgtccggtctagttatgttggtctgtttagttcaacagttaccgacatggtgtctaaaaatcgtttccgcaagg  10602300                            <---------ANAC46                            <---------ANAC58                            <---------ANAC58                         --------->ALFIN1                        ------->PIF4                        <-------MYC3                        <-------MYC2                        ------->PIF5                        <-------PIF4                        ------->MYC2                         <---------ANAC46                        <-------PIF5                        <---------DEAR3(1)                        <-------MYC4                       <-------TEIL                        ------->MYC3                     <---------ARR14(2)                        ------->MYC4                --------->LBD16                       <---------TGA1a             --------->HSFB2a(2)                       --------->O2                <---------HSFC1(1)                       <---------O2                <---------HSFB2a(2)                       --------->TGA1a         --------->KAN4(2)                      ------------>OsbHLH66   <---------KAN4(1)            ------>ZmHOX2a(1) --------->ALFIN1--------->KAN4(1)--------->ALFIN1                ------     ------->TEIL---------->DOF2      --------->ZAT18    --------->ARR11(1)                    ------ >>>>>>>>>>>>>LFY================bZIP_DOF     <----------TaMYB80                       --------->At4g35610   gccaatgtatcgtcctccagatagcacgtggagtggcaagggcattgaatattccagaagatgcggtggaagtgaagactcttcacaatagctggacatg  10602400                                                                     --------->LBD16                                            ---------->DOF2        <---------LBD16                                         --------->MYB46(3)       ------>ZmHOX2a(1)                                        --------->ANAC46          =====================HOX2a_HOX2a                                        --------->ANAC58        ------>ZmHOX2a(2)                                        --------->ANAC58       <------ZmHOX2a(2)                                  <---------ZAT2              <---------GLK1(2)      --------->ANAC58         --------->ZAT18          --------->At4g35610         <---------ARR14(2)     --------->ANAC46         <---------ZAT14          <---------At4g35610         --------->ARR14(2)     --------->ANAC58         --------->ZAT14         <---------ATERF1(1)      <------NtERF2          --------->YAB1         <---------ZAT18        <---------RAP2.3(3)      ------>NtERF2<---------MYB52(1)   ---------- --->ANAC58     --------->At5g28300   <---------ALFIN1  --------->DEAR3(1)      <------ZmHOX2a(2)   - --->ANAC58<---------REM1(2)  <---------MYB46(3)       --------->DEAR3(2)      <---------ARR11(3)   -   ctatgagattgtgcacacggtgaagaccccgatggctgctccacccaaaagagggatgccgacggatcctccggtgagcacgatcatacgcttcaaagtc  10602500               <---------LBD16             <---------ATHB12                                         --------->AHL20(2)         --------->ZAT18                                              --------->YAB1         --------->ZAT14            <---------ZAT18                 <---------AHL20(2)         <---------ZAT18            --------->ZAT18                 --------->AHL20(1)     --------->ATHB12          --------->ANAC46                     --------->AHL20(2) >DOF2   <---------ZAT14    <---------REM1(2)                      --------->YAB1 -------->ANAC58            -------->P               <---------ANAC46<---------YAB1            <----- -------->ANAC58         <------NtERF2         --------->GLK1(2)  <---------YAB1  <-----------GT1<---   actcgcatgagtgcaatcgtggaagtcgcctacacgagggcactacaagaatatggagtatttatagcattataatatagcagttaaccatgttctgcta  10602600                               <------MYB83                    --------->LBD16     <---------PCF2                               <------MYB46(1)                --------->LBD16     ------>NtERF2                               ----------->GT1               --------->ANAC46    --------->LBD16                              --------->MYB59                --------->LBD16    --------->ATERF1(1)        <---------LBD16       --------->MYB46(2)             <---------LBD16   <---------LBD16  --------->YAB1              <---------MYB46(3)            --------->TOE1(2) <---------ANAC46 <---------AHL20(2)          <---------MYB55(1)             <---------LBD16   <---------bZIP60(2) --------->AHL20(2)    <-----------GT1                    ------->TEIL     ----------->HVH21 -----DOF2--------->LBD16   <---------MYB52(1)     --------->ARR11(3)      ----------->TGA1 ------YAB1       <----------DOF2                 --------->YAB1     --------->AHL20(2)   taatttataatccggctaaacttttataccgtttggtaatttcaaaatgctataatcttgtacccgggaaataaaaaatgacgcgggccatgtttttgga  10602700  Previous    Next  AGI:  At1g30150.1    Description:  transposable element gene. CACTA-like transposase family (Tnp1/En/Spm), has a 2.2e-24 P-value blast match to ref|NP_189784.1| TNP1-related protein (Arabidopsis thaliana) (CACTA-element) Range:  from: 10602162    to: 10605143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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