Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ATERF1(1)                           --------->At4g35610                        <---------At4g35610                        --------->LBD16                      <---------LBD16                    --------->AtMYB61                 --------->GLK1(1)                 <---------GLK1(1)                --------->ARR14(2)                <---------ARR14(2)               <------NtERF2              <---------MYB46(3)             <---------ANAC58             <---------ANAC46             <---------ANAC58       <----------DOF2            <------NtERF2  ------>NtERF2            --------->ATERF1(1) <---------ALFIN1            <---------LBD16<---------At4g35610               --------->ANAC46           <---------MYB46(3) --------->ANAC46               --------->ZAT6           ------>NtERF2--------->At4g35610               --------->ZAT14           <---------AHL20(2)          --------->ALFIN1--------->DEAR3(1)              <---------ZAT14           --------->AHL20(2)     --------->MYB52(1)--------->ANAC46       --------->AHL20(2) --------->ZAT14 ----------->GT1 ------GT1<---------DEAR3(1) <---------ZAT18 --------->AHL20(2)  <---------ZAT14 --------->ATHB12 ---   caatgcattacggtggcggatacctccgcagcccacaactttgacaaataaaaaatagacttcacactataccgattagtgagtgattaaatactacaca  10596100                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                         --------->AHL20(2)                                                        <---------AHL20(2)                                 --------->YAB1        <---------AHL20(2)                            <---------ATHB12        <---------AHL20(1)                         <---------AHL20(2)         --------->AHL20(1)         ----------->GT1                         --------->AHL20(2)        <---------AHL20(2)--------->AHL20(2)                        <---------AHL20(2)       --------->AHL20(2)  <---------AHL20(2)                        --------->AHL20(2)      --------->AHL20(1)  --------->AHL20(2)                     --------->AHL20(2)        --------->AHL20(2)<---------AHL20(2)              <-----------GT1 --------->WOX13(1)<---------AHL20(1) <---------YAB1      --------->TOE1(2)     ---------->DOF2--------->AHL20(2)    ----------->GT1<---------AHL20(2)  --------->DAG2 ------>AHL20(2)    <---------AHL20(2) <------ZmHOX2a(1)--------->AHL20(2)  ---------->DOF2        --   tataatataaagtatttaacaaataaataaatcattcagaaggactgaaatatatatattaatttatttattaaaaaaaaaagggaaaatgtgcgaaatg  10596200           --------->LBD16          <---------ANAC46          --------->DEAR3(1)       --------->DEAR3(1)                                                           ---------->DOF2       ------->GAMYB                                                             --------->TOE1(3)      --------->MYB46(3)    --------->ICU4                                       --------->TOE2(3)      --------->DEAR3(2)   --------->ANAC55(2)                             --------->AtMYB61    --------->ARR14(2)     <---------ANAC55(2)                          <------ZmHOX2a(1)    <---------ARR14(2) <------ZmHOX2a(1)                               <----------ID1 ---->NtERF2         <---------TOE2(3)             <--------ZAP1    ---------->DOF2 =================   cctccaaaaccgccgtagaaattgaggataagtattaaactaaaacaaaactgggtcaaaaaacaaatccaaaaggaccaaaaccttaaagttgcacaaa  10596300                         ------->PIF5                         ------->MYC2                         <-------PIF5                         <-----------HVH21                         <-------MYC3                         <-------MYC2                                          ----------->GT1                         ------->MYC3                                        ========================                        --------->O2  --------->ANAC58                       <-------GAMYB                        --------->bZIP60(2)                               <------NtERF2                        <---------TGA1a                                   ------>NtERF2                        --------->ANAC46                                  --------->LBD16      ----------->GT1   --------->TGA1a                                 --------->ZAT18   --------->ALFIN1     <---------O2  --------->ANAC58                  --------->SPL7 =================================bZIP_DOF                       ------>ZmHOX2a(1)   tgtaagtgtggaaaaaaacattttccacgtgagagaattgaagcaagttgtgttctgtctctctgtcctaagagtccgccgttgtaaaactcgtgttttg  10596400                    ===================================HOX2a_HOX2a                    ------>ZmHOX2a(1)                --------->ARR14(2)                <---------ARR14(2)                <-----------HVH21              --------->LBD16             <---------ANAC46             <---------ANAC58                          <---------GLK1(2)             --------->ANAC55(2)                    --------->YAB1             =========================================bZIP_DOF             <---------ANAC58                   <------ZmHOX2a(2)             --------->TGA1a                   <---------ARR11(3)             <---------O2                  ---------->DOF2                  *TSS      <---------YAB1             --------->O2               --------->CCA1(2)  ------------>CBF ------------>CBF             <---------TGA1a ------>ZmHOX2a(1) --------->ARR11(3)      --------->ANAC46   <----------    --------->DEAR3(1)       ==========================HOX2a_HOX2a    <-------TEIL <---------YAB1 ======================MYC_MYB         <---------ARR11(3) --------->TOE2(3)--------->TOE2(3)        -   tttccaccgtctctcccgtgtcctctctctcctcacaaatagatataaagatcaacataatctcaatccatatacatcatcaattcttattcttacaaca  10596500                                                                           --------->TOE1(1)                   <---------ANAC58                                 <-------TEIL                   <---------bZIP60(2)                             --------->CCA1(2)                   <---------ANAC58     <---------ALFIN1          <---------ARR14(2)                   <---------ANAC46  <-----------GT1     <---------GLK1(2) --------->TOE2(1) -GT1--------->REM1(1)           <----------DOF2       <---------YAB1    --------------------->WRI1 ------>TEIL  ----------->GT1  ---------->ID1    <---------YAB1   --------->ARR14(2)   tgaagctacagcaaaattgtgacttggaacttcgtctttttcccacttcttatgattctgattcttcagatacaacctcgtaagtctctccctctcttga  10596600                               <---------TOE2(3)                                                 <---                               <---------YAB1                                                    ----                              --------->AHL20(2)                                                 ----                              <---------AHL20(2)                                              -------                              --------->YAB1                                               ----------                            <---------YAB1                                                 <---------                          -------->ATHB1                                                   ==========                          <---------ICU4                                                  -----------                         <---------ATHB51                                                 -----------                         --------->AHL20(2)                                    <---------ANAC46  <---                         <---------AHL20(2)          <----------DOF2           <---------REM1(1)<----                         --------->ICU4      <---------YAB1                 --------->ALFIN1  <------                      --------->AHL20(2)  ------->TEIL             --------->ATHB12       <----------                   --------->YAB1         --------->GLK1(2)      <---------WOX13(1)      -------->P                  <---------ATHB12   <---------ANAC55(2)      <---------AHL20(2)        --------->WOX13(1)   aatttgattttttgaatcaaatcataaattattaatattacatgaatctgataaacttttacatgtaattgatttgaagtgttgtagaatcaaccagttc  10596700           <---------------AGL15           --------------->AGL15         --------->ANAC58         --------->ANAC58       --------->MYB46(3)     --------->ANAC46  --------->ARR14(2)  <---------ARR14(2) --------->GLK1(1) <---------GLK1(1) ------HSFB2a(2) ----->HSFB2a(2) ----->HSFC1(1) -->ARR14(2) ----->AGL15 ------AGL15 ==========================MADS_MADS ------>AGL1         --------->GLK1(2) ------>AGL2        <---------GLK1(2)                                                      --------->ANAC55(2) ------HSFC1(1)<---------ATHB12  --------->YAB1                                         <---------MYB52(1) -----LBD16------->GAMYB         <-----------GT1                                     <-----------RAV1(2) ---ARR14(2) ------>MYB46(1)  --------->YAB1     ----------->GT1           <-----------GT1 <---------ANAC55(2) -------AGL1 ------>MYB83 ---------->DOF2  <<<<<<<<<<<<<<<<<LFY       <---------At4g35610  ----------   tggaaatccacaaccaaatgaagaatctcaaagaataacaattttctacaatggaaaaatgtgtttttcttcagatgttacccatcttcaggtatgtaac  10596800                                                  --------->ICU4                                                  <---------YAB1                                            --------->AHL20(2)                                            <---------AHL20(2)                                           --------->AHL20(2)                                     <-----------GT1                                        ---------                                   <---------GLK1(1)                               --------->YAB1     --------->ARR14(2)           <---------ARR14(2)    <---------TOE2(3)      ----------->GT1     <---------ARR14(2)      <---------ANAC46    <---------TOE2(3)            <------ZmHOX2a(2)  <---    <---------CCA1(2)        <---------ANAC58   --------->YAB1               <---------ARR11(3) -----  --------->YAB1             <---------ANAC58--------->YAB1            --------->ANAC58     --------- <-------TEIL               <---------MYB46(3)  <---------ICU4  ------->TEIL --------->ARR11(3) ----- ->GT1         <---------AHL20(2) --------->ARR14(2)   <-----------GT1 --------->ANAC58     ------>ZmHOX2a(2)   acattcatatctgtgatttttttttttttttgggtggatttacgaattaataatgtttaacgaatgaatatgtaggcaagatcgataatatcgatcgcaa  10596900                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------GLK1(2)                                    <---------ARR14(2)                       ======================HOX2a_HOX2a                 <---------At4g35610                       =====================HOX2a_HOX2a                  --------->ZAT2          ----                       ------>ZmHOX2a(1)                                 --------->At4g35610    <----                      --------->TOE2(3) ------>ZmHOX2a(1)           <---------ICU4            ------- >ANAC58       --------->ANAC46     --------->ARR14(2)           --------->YAB1         --------->ANAC58 ------ZAT2    --------->ANAC58   ----------->ARR10              <---------ICU4         --------->ANAC58 ---->ANAC58   --------->ANAC58  --------->ETT(1)  <---------ETT(2)--------->ICU4     ---------->DOF2 >ANAC58   >>>>>>>>>MYB2       <-----------HVH21   --------->ETT(2)<---------YAB1<---------ARR14(2) ---->ANAC58   --------->bZIP60(2)<---------DEAR3(2)            <---------YAB1   --------->ARR14(2)   gcagagaaatgaaaaccaagtcatcctcaaacgggtcggatcctccaaacaagtcgacctcatttcatcataatcagcttccaaatccaaaagcatcaat  10597000  Previous    Next  AGI:  At1g30135.1    Description:  JAZ8/TIFY5A (JASMONATE-ZIM-DOMAIN PROTEIN 8). Identical to Protein TIFY 5A (TIFY5A) [Arabidopsis Thaliana] (GB:Q8LBM2); similar to JAZ7/TIFY5B (JASMONATE-ZIM-DOMAIN PROTEIN 7) [Arabidopsis thaliana] (TAIR:AT2G34600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40332.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 10596476    to: 10597223    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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