Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------YAB1                                              --------->YAB1                                              <---------ICU4                                              -------->ATHB1                                             <---------YAB1                                             --------->AHL20(1)                  --------->AHL20(2)         <---------AHL20(2)                  <---------AHL20(1)         --------->ICU4                  <---------AHL20(2)         --------->AHL20(2)         <---------MYB52(1)               --------->AHL20(2)       ----------->GT1                    <---------AHL20(2)   ------->TEIL   --------->AHL20(1)      --------->AHL20(1)                                        - ---->YAB1    --------->AHL20(2)         <---------AHL20(2)                                         < ----ATHB12   <---------AHL20(2)         --------->AHL20(2)               <---------YAB1       <----- ->WOX13(1)  <---------AHL20(2)<---------AHL20(2)            --------->HSFB2a(2)               ------   aaatgtatgcagttatttattttattatctgatttttttttaaaaaaattattatctgattttctagtatgcagttttcattctacgagttttagttctg  10587200                                                       ------->MYC3                                 -                                                 <-----------GT1                                  ---                                            --------->ATHB51                                   ------                                            <---------AHL20(2)                                 ------                                        <---------AHL20(2)                                     ------     --------->YAB1                     --------->AHL20(2)                                     ------    <---------YAB1      <---------AHL20(2)  --------->AHL20(2)                                 ------ -------->ARR14(2)     --------->AHL20(2)   <---------ICU4      --------->ANAC55(2)           <------ ---------ARR14(2)     <---------AHL20(2)  --------->ICU4       <---------ANAC55(2)          <------- ----ANAC46        <---------YAB1<---------At4g35610   <-------MYC3  --------->AHL20(2) <------------ ----->GT1        --------->AHL20(2)   --------->AHL20(2)      <-------TEIL    <---------MYB46(3) ---   tgaattctcataatgcaaatttttataaatttgagagatgatttaattatttatccatatgcaaatacatattatatacagtggtttagtaacgtccacg  10587300                                                                                       ----------->RAV1(1)      --------->ICU4                                                                  --------->ANAC46 ------->GAMYB                                                                      --------->ANAC46 -------->MYB46(3)                                                                  --------->ANAC58 -------->RAV1(1)                                                                --------->ZAT18 --->ANAC55(1)                                                                   <---------ZAT18 --->ANAC58                                                                      <---------WRKY38(1) --->AtLEC2                        <-----------GT1                             <---------TCP16(1) --->ANAC58                     --------->YAB1                   <---------DAG2<---------PCF5 --->ANAC46                  --------->YAB1            --------->AHL20(2)<----------DOF2          --- ---LBD16      ----------->GT1  <---------ICU4    --------->AHL20(2)    <---------ANAC58       ------ --ALFIN1     --------->ANAC46 <---------YAB1   --------->TOE2(3)<----------DOF2--------->TCP16(2)<-- -----------TaNAC69(2)      <---------YAB1   ----------->RAV1(1) ------>ZmHOX2a(1)  --------->ANAC58 ------>MYB52(1)     <-----------GT1     <--------P<---------AHL20(2)   <---------ANAC58       ------   caacagccacgattatacgataaataccctatgataataactggttgcaacattaaataaaacaatcctttttggcttttgggtccacacaacacaataa  10587400                                                                              <--------HAHB4                                                                              --------->ATHB12                                                                              <---------ICU4                                                                              --------->ATHB51                                                                             --------->ICU4                                                                             <---------YAB1         -   <-----------HVH21                             --------->ZAT6         --------->ANAC58      ------- ------>ARR11(3)                              <---------AHL20(2)        --------->ANAC58    --------- --->AHL20(2)                  <----------ID1 --------->AHL20(2)        --------->ANAC46    --------- -------AHL20(1)       ----------------->AGL1--------->AHL20(2)        --------->RAP2.6(3) --------->YAB1 --->YAB1      <<<<<<<<<<<<<<<<<LFY          <---------AHL20(2)   --------->AHL20(2)  <-------TEIL---   tatactgtcactgaagataacaatggcctctatgagacaaattctaaattaatactaacttatagcattttaaaacggcattattagattcaaaaataat  10587500                                                              ------>MYB46(1)                              --------->TOE1(3)             <---------MYB111(1)                              --------->TOE2(3)             <---------MYB59                        <---------ANAC55(2)                 --------->AtMYB61                   --------->AHL20(2)                       <---------MYB46(2)       <-----------GT1  --------->ANAC55(2)                --------->ANAC46  --------->AHL20(2)   <---------ICU4                    <-----------GT1 ---------->GT1    <---------AHL20(2)        <---------AHL20(2) -->YAB1          --------->AHL20(2) <-------MYC3  <---------YAB1 >AHL20(1)        <---------AHL20(2) ------->MYC3--------->YAB1                       *TSS  --------- >AHL20(2) ----------->GT1   ----------->GT1--------->AHL20(2)------>MYB83          <---------YAB1 ------->DOF2  --------->AHL20(2)   <---------O2<---------ATHB12                    ------------>CBF   aaaagtaaattactcgttaaattaatacttatcgttaaacgtggcattaaatcataaatataccaaacctctgcatttgaagggtcatcaatgtcaatct  10587600                                             --------->CCA1(2)                         --------->WOX13(1)                                            --------->ARR11(3)                   <---------ALFIN1                      <---------ZAT6        <---------ARR14(2)               --------->At4g35610              <------ZmHOX2a(2)             --------->ARR11(1)             --------->YAB1<---------ATHB12             <---------ARR11(3)             <---------ARR11(3)          --------->WOX13(1)         ---------->DOF2                    --------->ARR14(2)   ------>ZmHOX2a(1) --------->ANAC46 >WOX13(1)   --------->ARR11(3)           <---------ZAT6  <----------DOF2 <---------ATHB12   ctgatttttgaaaaagatcagatagagatagagagacagaggtagagatatggaattgctctttctcctctgttcaatcatctacacttcaatcacttcc  10587700                                                                    <------ZmHOX2a(2)                                                                   --------->ARR14(2)                                                                <------NtERF2                                                               <-----------HVH21                                                              --------->RAP2.3(2)                                                              --------->DEAR3(1)                                                              --------->RAP2.3(3)                                                             --------->RAP2.3(1)                                                             --------->ERF1                                                             --------->ATERF1(1)                                                             <------NtERF2                                                             --------->DEAR4(2)                                                             --------->RRTF1(1)                                                            --------->ABI4(1)                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                           --------->RAP2.3(2)                                                           <---------DEAR3(1)                                                           --------->RAP2.3(3)                                                           --------->DEAR3(1)                                                           --------->RRTF1(2)                                                           --------->RRTF1(3)                                                          --------->ATERF1(1)                                                          <------NtERF2                                                          --------->ORA47(2)                                                          --------->DEAR3(2)                                                          --------->ERF1                                                          --------->DEAR4(2)                                                          --------->RAP2.3(1)                                                          --------->RAP2.6(1)                                                          --------->RRTF1(1)                                                         ------>NtERF2                                                        --------->ANAC46                                                      --------->ANAC58                                                      --------->ANAC58                                                  <-----------HVH21<---------ARR14(2)                                              =============================HOX2a_HOX2a                     <---------MYB52(1)       ------>ZmHOX2a(1)------>NtERF2          --------->ANAC46                     --------->ARR14(2)--------->DEAR3(1)<---------ATERF1(1)    <----------DOF2                ------>ZmHOX2a(1)   <---------ALFIN1  --------->ANAC46 ------>ZmHOX2a(1)   atcttcttctctcttctcctcccgtttcgcttccttctccaccgtctccttccttcacgcgccgccgtcgatcctaatgtctctttctacgaaggcacag  10587800                                                     <---------ZAT18                                                    <---------ANAC55(2)                               <----------DOF2      --------->ANAC58                             <---------DAG2         --------->ANAC55(2)                       <------ZmHOX2a(2)                          <---------ALFIN1          --------->ANAC58                       --------->LBD16                        ------>NtERF2           <-------GAMYB--------->WRKY12            <---------LBD16                        <------NtERF2          --------->MYB52(2)                       ------>NtERF2                       --------->ANAC58        <---------MYB46(3)                       --------->ABI4(1)                   ------>ZmHOX2a(1)          --------->SPL7 --------->WRKY38(1)       --------->DEAR3(1)               <-----------HVH21             <---------MYB52(1)                       --------->MYB46(3)    --------->MYB46(3) --------->ANAC58    <---------ANAC58  ----------->HVH21      <---------ALFIN1    --------->ANAC58   --------->ANAC46    <---------ANAC58<----------DOF2          --------->ANAC46    --------->ANAC58<-----------HVH21<---------MYB52(1)  <---------DAG2         <-----------GT1    ----------->HVH21 --------->SPL7<-------GAMYB<---------MYB52(1)    ---------->DOF2--------->DEAR3(2)   tctggcacgaccgtctccgtcctgtccgccactctttccgttattccgttcgttacgcactctttgacctcgacaaagctattaacacaccgccggatca  10587900             <---------ZAT2             --------->ZAT2            ------->TEIL        <------NtERF2       ------>NtERF2      ----------->HVH21      --------->At1g77200      --------->DREB2C(2)      --------->DEAR3(1)      --------->RAP2.3(3)     --------->ATERF1(1)               ------>NtERF2     --------->RAP2.3(1)             --------->LBD16     --------->ERF1                 --------->DEAR3(1)     --------->ORA47(2)           --------->MYB52(1)     --------->DEAR3(2)          <---------ALFIN1                            --------->ARR14(2)    <---------ATERF1(1)         --------->MYB46(3)                           <---------ARR14(2)    ------>NtERF2              --------->SPL7                        <------ZmHOX2a(2)    --------->At4g35610      <---------SPL7                         <---------ARR14(2)    <---------At4g35610     --------->TOE1(1)                       <---------ARR11(3)    --------->LBD16         --------->TOE2(1)          --------->WRKY38(1)   --------->GLK1(2)   <---   --------->ANAC46        <---------HSFB2a(2)       <-------GAMYB  --------->ARR14(2)           <<<<   --------->DEAR3(1)      --------->HSFB2a(2)      <---------MYB46(3)      <---------GLK1(2) -------  <---------LBD16  <---------ANAC46<---------LBD16  --------->MYB52(2)------>ZmHOX2a(2)<---------YAB1   tttctccgccgacgaagctcgccgtgtttctcgtaccaccgggccaatgtaagtttgttgactcgtccaagatcggaagaatctggattttgatacctag  10588000                                                                           <---------GLK1(2)                                                                           --------->ARR14(2)                                                                     --------->MYB111(2)                                                       <-------GAMYB --------->MYB46(2)                              <------ZmHOX2a(1)       ===================RAV--------->CCA1(2)                            <---------------AtSPL8--------->ARR11(3) --------->MYB111(1)                    --------->ICU4        --------->CCA1(2)       ------------>MYB.PH3(2)               <---------ANAC55(2)       <---------ARR11(3)     <------ZmHOX2a(1)      <----------DOF2       <---------TOE2(3)     <---------GLK1(2)  --------->MYB52(2) <---------ANAC58 ------AGP1    <---------ANAC58  <---------MYB52(2)   <-----------RAV1(1)----------->ARR10 <<<ZML2       <---------ANAC58  --------->MYB46(3)--------->GLK1(2) --------->MYB59    <---------ANAC58 -->HSFB2a(2)  --------->ANAC55(2)       --------->ARR14(2)  <-----------RAV1(2)        <---------ANAC46   aactgaaactttataatgcgtaatgtttttgaggaacaaacaagatttgaaagattctgttgatcaggagttagttagatttgcaaaattgagtgttttt  10588100  Previous    Next  AGI:  At1g30130.1    Description:  similar to hypothetical protein [Brassica oleracea var. alboglabra] (GB:CAA99112.1); contains InterPro domain Protein of unknown function DUF1365 (InterPro:IPR010775) Range:  from: 10587586    to: 10589744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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