Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     ==                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                              <------                        ----------->RAV1(1)                                    --------->ARR11(3) ---                      --------->LBD16                                          <---------ARR11(3)----                     --------->ANAC46                                      ---------->DOF2--------->ANAC46                    <---------LBD16                                 --------->HSFB2a(2)   --------->ANAC58                   <---------At5g28300                              <---------HSFB2a(2)   --------->ANAC58 -ICU4    ---------->DOF2  ------->GAMYB                   --------->ZAT6 --------->AtMYB61  <-------   caaaatcggagacaaagacattaccgcaacagcatttggaatcaatttctgagagtgacgaactctaagtccagaaccaaagctcttcttactcgcatca  10586200    --------->MYB46(3)  --------->ANAC58  --------->ANAC58  --------->ANAC46                                            --------->ARR11(3) ===============================HOX2a_HOX2a                   <---------AGP1 -----ZmHOX2a(2)                                        <----------DOF2 ------>ARR11(3)                                  --------->ARR14(2) ------>AGP1 <---------ARR11(3)                   <---------ARR14(2) -------ARR14(2)                                ------->GAMYB <---------ARR11(3) ---At4g35610--------->ARR11(3)                --------->ANAC58 ------>ARR14(2)                               --------->ANAC58       --------->GLK1(1) ----->At4g35610         ------>ZmHOX2a(1)     --------->ANAC46 ------>ZmHOX2a(2)                ---- ----HVH21  <---------CCA1(2)                --------->MYB52(1)<------ZmHOX2a(2)       --------->At4g35610   gatccagccactatatatctctggctcctcactgcatcaaaatcaaacaacgaaactgctttaagatctcacaaatccatctcaatagaagctccaaaac  10586300                                       <---------AHL20(2)                                      <---------AHL20(1)                                      --------->AHL20(2)                                         ----                                      --------->AHL20(1)        <---------HSFB2a(2)             <----                                      <---------AHL20(2) --------->CCA1(2)            <---------ANAC58                              --------->YAB1            --------->ARR11(3)            <---------ANAC46                             <------ZmHOX2a(2)          <---------ARR11(3)            <---------ANAC58                         <------ZmHOX2a(2)          ---------->DOF2       --------->MYB52(1)   ------   --------->GLK1(1)    <---------ARR14(2)       --------->TOE1(3)    <------ZmHOX2a(1)      -------- ------->RAV1(1)        --------->ARR14(2)     ------->TEIL     --------->HSFB2a(2) --------->GLK1(2)   accagaaatcgaaatcagagaatgcagatcgatcatcaaataaaattcgaacctgaaagatttgtgcgagaaggagcaacgaagagtttcttggaatcga  10586400                                   <---------ZAT2                                   --------->ZAT2                             --------->ZAT2                             <---------At4g35610                             --------->At4g35610   <---------AHL20(2)        <---------ZAT2   --------->AHL20(2)     <---------At4g35610 ----->ANAC46        <------NtERF2 <---------At4g35610                       <---------LBD16 -----LBD16        <---------DEAR3(1)       <---------GLK1(2)          ---------->DOF2 --->MYB52(1) <---------DOF5.7(2)  --------->At4g35610--------->ARR11(3)  <---------ZAT2 ->DEAR3(2) --------->DOF5.7(2)  <---------ALFIN1     <---------ARR11(3)  --------->ZAT2   cggaattaaacgtcgataacgtcgtcgtagcagctccagctccatggattatcgaagacattttttatatgctcaaagctcgggacaatttcgaagaatt  10586500                                                               --------->MYB52(1)                                                          ----------->HVH21                <---------ARR11(3)                      ----------->GT1                --------->AHL20(1)                --------->ANAC55(2)                --------->ARR11(3)                --------->ANAC46               --------->AHL20(2)                 <---------ANAC55(2)           --------->AHL20(2)                     --------->ANAC58           <---------AHL20(2)                     --------->ANAC58                 <---------AHL20(2)    <-------GAMYB                               --------->CCA1(2)      --------->GLK1(1)   ----------->GT1                             --------->ARR14(2) --------->LBD16 <---------AHL20(2)   <---------ZAT6                              <---------ARR14(2) ----------->GT1 --------->AHL20(2)   ttggactgttaatataaatatatacaagtgtatgcaaacagaaaatggcgatacgaaacagtgacaagcggagaaatcgaagaattaaatgaaattgtcg  10586600                                                                                                   --                                                                                              -------                                           <-------MYC3                    <---------ANAC58   -------                    <-----------RAV1(1)    ------->MYC3                    <---------ANAC58  --------                   *TSS              --------->ARR14(2)               <-----------RAV1(1)    --------             <---------ANAC46        <---------ARR14(2)               <---------TGA1a        >>>>>>>>       --------->AHL20(2)         --------->YAB1                      --------->TGA1a       ------->GAMYB       <---------AHL20(2)        <---------ATHB12                     --------->O2          =========       --------->AHL20(1)      --------->WOX13(1)                     ==============================MYC_MYB      --------->AHL20(2)     <---------ZAT18       <------------CBF   <---------O2         --------->MYB46(3)      <---------AHL20(2)     ------------>CBF      --------------------->WRI1     <------------CBF --   aaatcgaattaaattatgtgtattgttgttgtgcaatcaaatccacatgtttacattgttttcatcgaactcatgtggcttctctattgtataacaacca  10586700                                              <---------ARR14(2)                                              ------->TEIL                                      ------->MYC3                                      <-------MYC3                                      <-------MYC4                     --------->MYB52(1)       --------->ARR14(2)            <-------MYC3              ------->MYC4            ------->MYC3              <-------PIF5            <-------MYC4              <-------MYC2            <-------MYC2              ------->PIF5            ------->MYC4              ------->MYC2                                              -----           --------->O2               <-------PIF4                                              <----           --------->TGA1a            ------->PIF4                                              -----           <---------ANAC55(2)       <---------TGA1a                                        ------>MYB83       <-----------GT1               <---------ANAC55(2)                                  --------->MYB46(3)     --------->AHL20(2)              <---------ANAC46                                     <---------MYB59     <---------AHL20(2)              --------->TGA1a                                      --------->AtMYB61 ------->YAB1     --------->ANAC55(2)--------->O2                                  --------->ZAT2 -->MYB46(3)------->MYC2            ------------>OsbHLH66                          ----------->RAV1(2) ----->CBF --------->ANAC55(2)     <------------OsbHLH66                         <---------ALFIN1 ->ANAC58  <---------TGA1a    --------->ARR14(2)                                 ------->GAMYB<------ ->ANAC58  <---------O2--------->MYB46(3) ------->TEIL                     <---------ANAC58 ------>MYB46(1) >>>>>>>>>LFY     <---------ANAC55(2)<---------O2               --------->ZAT6  --------->MYB46(3) <- ====================MYC_MYB  <---------ARR14(2)  --------->ATHB12         <---------ANAC58 -------->P ------->TOE2(3)<-----------GT1<---------WOX13(1)<---------YAB1<---------YAB1 <-----------GT1 -------   atgttaatttaacacgtgttacttaacgactggattggcacgtgtacgtatatgatttgtggattatcactgggtttgcttaaccacctggaccaaccta  10586800     <---------DOF5.7(2)   <---------MYB52(1)   --------->DOF5.7(2)  --------->TOE2(3)               <---------HSFB2a(2)  --------->TOE1(3)               --------->HSFB2a(2) <---------ANAC46              --------->ARR14(2)         <---------ANAC58 <---------ANAC55(2)           <---------ARR14(2)         <---------ANAC46 ->MYB83                       --------->AGP1        --------->O2 -----ICU4                   --------->DEAR3(1)      --------->TGA1a    --------->AHL20(2) ->MYB46(1)           --------->GLK1(1)              <---------TGA1a    <---------AHL20(2)          - ---MYB59          <---------TOE1(3)                 <---------O2      --------->ICU4          ------ ----------GT1     <---------TOE2(3) <------ZmHOX2a(1)    <---------ANAC58     <------ZmHOX2a(2)    < -->TOE2(3)    --------->CCA1(2)<------ZmHOX2a(2) <------NtERF2   ----------->GT1              ------   attacgttaactgtgagatttgaggtttccaccgatctaggagttgatgggcctcaagtgtcttggcccagtaattaatagatcagtattatccagtaag  10586900                                                                         ---------->DOF2                                                                       <---------MYB52(2)                <---------ARR11(3)                                --------->ANAC58      --------->TOE2(3)                                           --------->ANAC55(1) -------->ARR14(2) <----------DOF2                                --------->ANAC58 --->ANAC58     --------->ARR11(3)               --------->YAB1   --------->ANAC46 ---------ARR14(2) <---------DAG2  ---------->DOF2                --------->ANAC55(2) --->ANAC58 ---------->DOF2<-----------GT1      <---------YAB1   <---------TOE2(3)   caaattttcgtcaaaaaagaacttttttttttctccacaaagaacaaattttcataagcgaaatataaacgtaactaaagcatttacattgagtctctct  10587000                                                                  <---------YAB1                                                                 <---------AHL20(2)                                                               <---------YAB1                                                               <---------AHL20(2)               -----                           <---------AHL20(2)               <---------AHL20(2)                 <-----                   <---------ANAC46                         <---------AHL20(1)      <---------AHL20(1)          --------->ARR11(3)                                --------->AHL20(1)      <---------AHL20(2)          <---------AHL20(2)                          ----------->GT1               --------->AHL20(2)          --------->AHL20(2)                      --------->ARR14(2)            <---------YAB1------>MYB46(1)          <---------ARR11(3)                   <---------------AGL15<---------AHL20(2)        ------>MYB83          <---------AHL20(1)            ----------->GT1     --------->AHL20(2)--------->YAB1 --------          --------->AHL20(1)       <---------YAB1 <---------ARR14(2)--------->AHL20(2)   <-----------GT1   agtctctaccaatatattgttttgtatattttatactctgatttgtaacacatatatggtaaaatattattttaatgcgattataaaaaatttaccaatc  10587100  Previous    Next  AGI:  At1g30120.1    Description:  PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring). similar to transketolase family protein [Arabidopsis thaliana] (TAIR:AT2G34590.1); similar to unknown [Populus trichocarpa] (GB:ABK93053.1); contains InterPro domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; (InterPro:IPR009014); contains InterPro domain Transketolase C-terminal-like; (InterPro:IPR015941); contains InterPro domain Transketolase, central region (InterPro:IPR005475); contains InterPro domain Transketolase, C-terminal; (InterPro:IPR005476) Range:  from: 10584144    to: 10586619    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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