Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                       --------->YAB1        --------->TOE2(3)                                                            <---------KAN4(2)        --------->TOE1(3)                                                        <-------TEIL -------->At4g35610                                                            <---------ARR14(2)  <- ---------At4g35610  ------->TEIL                    ---------->DOF2           --------->ARR14(2)  <- -----DOF2    ------->GAMYB               --------->ZAT6     --------->YAB1    <---------GLK1(2)  <--   tgagatgaaaccctaaccctctgcatcttcttctacttcttctaacactcacagattaagcactcatatgcttcaatttcagattcgaatgatcagtaat  10561000    --------->AHL20(2)                         <---------ALFIN1    <---------AHL20(2)                        <---------REM1(2) --------->TOE1(3)                            <---------ZAT14              --------->At4g35610 --------->TOE2(3)                            --------->ZAT14            --------->YAB1 ->GT1                                     ------>ZmHOX2a(1)           --------->GLK1(2)      ------- --------TOE2(3)                       --------->ARR14(2)  --------->TOE1(3)            --------->ZAT6 --------YAB1                        <---------MYB46(3)    --------->TOE2(3)   --------->AtMYB61 ---------GT1                     <----------DOF2  ----------->GT1----------->GT1 --------->ZAT6    <   taacattaaaatcaatgggaagttcaaagttttcaactttggttcctctacacttgttaaacctgaaatggagaatcagcaccatcactaacactaacac  10561100             --------->GLK1(2)            <---------GLK1(2)            --------->ARR14(2)            <---------ARR14(2)         <---------HSFB2a(2)         --------------->AGL15         --------->HSFB2a(2)        ----------------->AGL1                                                        ---------->DOF2      <-----------GT1                                                             <----------ID1 --------->YAB1                                                                --------->DAG2<------- -->ZAT6<-----------------AGL1           --------->GLK1(2)     <------ZmHOX2a(2)--------->DAG2 ---------ATHB12             --------->ATHB12            <---------ANAC46     ---------->DOF2--------   taatcaaatttccagattctgtaatagaaatcgattgaactagaatccaaattccaattcagtggatcaaaccctagaagaaaaggggcaaagagaaatc  10561200                                                                                           <------ZmHOX2a(2)                                       --------->GLK1(2)                              ---------->DOF2                                    --------->ANAC58                              <----------ID1                                    --------->ANAC58                         <---------TOE2(3) <-----                                --------->ANAC58                        --------->TOE2(3) --------->ARR11(3) --GLK1(1)                      --------->ANAC58             --------->At4g35610---------->DOF2------ ->GLK1(1)                    ---------->DOF2            ------>ZmHOX2a(2) ---------->DOF2<---------ARR11(3)   cactagaagaagcgaaatcgatgaagaaacagagaagcaagaatcgatagaacaagtgatcgaagctaaaaaaacattaaaggaaagacaaagatcagat  10561300                          --------->RAP2.3(1)                          <------NtERF2                         <---------DEAR4(2)                      <-----------HVH21                         <---------ATERF1(1)                  --------->HSFB2a(1)                         <---------ERF1                      ------->TEIL                         <---------RAP2.3(1)                 <---------ARR14(2)           <---------HSFB2a(2)                               --------->ARR14(2)           --------->HSFB2a(2)       --------->ZAT6          <---------ARR11(1)     --------->GLK1(2)   ------>NtERF2 <<<<<<<<<TAC1         --------->GLK1(2)    --------->ARR14(2)   <---------ORA47(2)                 <---------CCA1(2)------>ZmHOX2a(1)    <---------ARR14(2)  <---------RAP2.3(3)                 <---------ARR14(1)    <---------AHL20(2)    <---------GLK1(2)   <---------DEAR3(1)               --------->HSFB2a(2)--------->TOE2(3) ----GLK1(2)            <---------RAP2.3(2)       <---------ANAC58   <---------At4g35610 --->ARR11(3)           <---------RAP2.6(2)       <---------ANAC58   --------->At4g35610        -----   ttttcagattcttacagaacaacaaggcggcgatagataacactgtcgttttgcttcgtcgcgaatctttcagctcttcctcatttttttttgttttgtt  10561400                                                                         --------->ARR14(2)                                                                         --------->GLK1(2)                                                                     ------>NtERF2                                                                     --------->LBD16                                                                 ------->GAMYB                                                                --------->MYB46(3)                                                                <------------AtMYB77                                                              --------->MYB52(1)   <---------ZAT14                                                           <---------ANAC55(2)     --------->ZAT14                                                        <---------AHL20(2)  <----------DOF2                                                     <---------AHL20(1)  <---------ARR11(1)                                                     --------->AHL20(2)  <---------ARR14(2)                                 --------->ARR11(3)  --------->AHL20(1) --------->GLK1(1)                  --------->ANAC58              <---------AHL20(2)  --------->RAP2.3(2)                  --------->ANAC58              --------->AHL20(2)  --------->RAP2.6(2)    --------->ARR14(2)                  <---------ANAC55(2)   <---------AHL20(2) --------->ANAC55(2)    <---------ZAT6                 <-----------------------TaNAC69(2)  <---------AHL20(2) <---------CCA1(2) <---------GLK1(2)       *TSS--------->HSFB2a(2)   <---------ARR11(3) <---------------AGL15--------->ARR11(3)<---------ARR14(2) ------>GT1<---------HSFB2a(2)  <---------CCA1(2)   --------------->AGL15<---------ARR11(3)--------->GLK1(2)   gtaaattggtaatcgagaagacgtaaaccagagtatatctatttattcattttaatattttaagtaactgccgcaaatcttttagtgtagaagaatctgt  10561500                                   <-----------GT1                                  <---------YAB1                    --------->AtLEC2                                -------->HAHB4                    <---------ANAC55(1)                                <---------ICU4                    <---------ANAC58                                --------->YAB1                    <---------ANAC46                                <--------HAHB4                    <---------ANAC55(2)                                --------->ATHB51                  --------->ANAC55(2)                               <---------YAB1                     <---------ANAC58                               <---------ATHB51                  <-------TEIL              <---------YAB1                               --------->ICU4                 --------->YAB1              --------->AHL20(2)                 <----------DOF2-------->ATHB1             --------->YAB1                 <---------AHL20(1)        ----------->HVH21   <---------AHL20(2)           <---------TOE2(3)                --------->AHL20(1)      <---------ICU4<---------MYB46(3)                   <---------YAB1      <---------TOE2(3)    <--     --------->ICU4 <-----------RAV1(1)            <---------AHL20(2)       <-----------GT1<---------AHL20(2)     ------>ZmHOX2a(1)      --------->AHL20(2)  ----------->GT1 --------->CCA1(2)        --------->YAB1   agatgtcctaatgacagttcttttgttggattaattattactatcttatgaagttaattaagaatgatacgtgcaaattaacaatatacaaatataattc  10561600           <---------AHL20(1)           --------->AHL20(2)                                                       <---------ANAC55(2)           <---------AHL20(2)     <---------ICU4                               ----------->GT1   <---------ANAC58               -------->HAHB4     --------->ATHB12 --------->CCA1(2)             -   <---------ANAC58               --------->YAB1    <---------YAB1   <---------ARR11(3)     <--------   <---------ANAC46              <---------ATHB51 --------->YAB1     --------->ARR11(3)    --------->ALFIN1 --------DOF2                    --------->ICU4  <---------YAB1  <-----------------AGL3 <-----------RAV1(1)   cttttgcgagtaattaattctatgaaatgggcttaataatgggcctatactattatcatttgcccatacaatatatgggtcttgttacatatggtggtga  10561700                                                                                  <---------At4g35610   ----------->GT1                                                                --------->At4g35610  <---------TOE2(3)        <---------ARR11(3)                     --------->AHL20(2)             ---- --------->DOF2            --------->ARR11(3)                     <---------AHL20(2)             <--- -MYB46(3)                <---------GLK1(2)                  <-------TEIL  ---------->DOF2<---------ICU4   tacaaaggtaaatttttagtctagaccaaaatctcaagttcagttttagataacataacttgattcatttttttatcgaaagagagctctcaccattact  10561800                                                                         --------->AHL20(2)                                     --------->bZIP60(1)                 <---------AHL20(2)                               <---------ARR14(2)                        --------->ICU4                             <---------ETT(2)                       ----------->GT1                             --------->ETT(2)                     ---------->DOF2                   <                         --------->MYB59                     ----------->GT1                      --- ----------->HVH21   --------->MYB52(2)                    <---------ARR14(2)                     <-- ----->ZAT14       <---------MYB52(1)<---------bZIP60(1)  <---------CCA1(2)              ------------ ------ZAT14     <---------ZAT6--------->ARR14(2)  --------->ARR14(2)    <---------ATHB51<-----------   aaactgacatatacagtttgtgttagttatgtcgatatggcatcatctgtttgaattcgcatatcgtaaaaagaaataattctatttctaaattgtacat  10561900  Previous    Next  AGI:  At1g30090.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At1g30090 [Arabidopsis Thaliana] (GB:Q9C6Z0;GB:Q9C8R2); similar to AFR (ATTENUATED FAR-RED RESPONSE) [Arabidopsis thaliana] (TAIR:AT2G24540.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75078.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 10559545    to: 10561407    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version