Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ----------->HVH21       <--------P                                  --------->ANAC58           --------->ARR11(3)   <---------ANAC46                                --------->ANAC58       ---------->DOF2   <---------ANAC55(2)                      --------->ZAT2            ----------->HVH21  <---------LBD16        <---------ANAC58   <---------ZAT2           --------->At5g28300 --------->CCA1(2)       <---------ANAC58   --------->At4g35610     ----------->GT1 -------->ARR10        --------->ARR11(3)   <---------At4g35610    <---------DEAR3(1)   ttgatacgggtagtgacccattggagagcttgttgagggtctactaagctgggaagcatttcattttcgacggtgacaaagagctcgatattggaattgg  10552800                                                                                      <---------MYB46(3)                                                                                   --------->LBD16                                                                    <---------REM1(1)--------->ALFIN1                                                        --------->ZAT14            <---------ANAC46                                       ---------->ID1   --------->ZAT18          <---------LBD16    <                 <---------TOE1(2) <---------ANAC58     <---------ZAT18        <-----------HVH21    -            <<<<<<<<<TAC1          <---------ANAC58     <---------ZAT14     <----------DOF2         <          --------->ZAT6         --------->GLK1(2)   <---------ANAC46    <---------ARR11(3)     <----    ----------->GT1             <---------GLK1(2)    <---------ANAC58 <---------HSFB2a(2)     <------   <---------TOE2(3)     <-----------HVH21           <---------ANAC58 --------->HSFB2a(2) <------ZmHOX2a(1)   caaatgaggttaacactcgagggtttgtgtcatagattcttgtcttattgatatggagtgaactcaagagttgtagaactttgtccggtggaggaagatt  10552900        <---------WRKY18(1)       --------->WRKY38(1)     --------->O2     <---------O2   ------>NtERF2  --------->DEAR3(1)                                                                         --------  --------->DREB2C(2)                                                                       --------- --------->ATERF1(1)                                                                        <-------- <------NtERF2                                                                             <---------YAB1 --------->ORA47(2)                                                                      <---------ICU4 --------->RAP2.3(1)                                                                    --------->AHL20(2) ---------ATERF1(1)                   <----------DOF2                                   --------->ICU4 ----->NtERF2                    --------->GLK1(1)                                      <---------ATHB51 ---------RAP2.3(1)              <---------GLK1(1)          <---------ANAC46        --------->AHL20(2) -------RAV1(1)                <------ZmHOX2a(1)            ----------->GT1         <---------AHL20(2) ---GLK1(2)           ----------------->AGL1    --------->MYB46(3) --------->AHL20(2)   <---------AHL20(2)   gtcgccgacttgaccatagttgatgccaagagaggagaccctttgaaacaacaatccatgttctgtgaaaaaaatgtaagagaaatttaaataattaaag  10553000                                          <---------ETT(2) --------->AHL20(2)                                          --------->ETT(2) --------->ATHB51                                       <---------MYB46(3)  -------->ATHB1              --------->ANAC58                                    <-------GAMYB         <---------ATHB51             --------->ANAC58                                   --------->MYB111(2)    <---------ATHB12           <<<<<<<<<WRKY18                                   --------->MYB55(2)     --------->ICU4            --------->WRKY18(1)       --------->MYB52(1)      <---------YAB1 ----------->GT1                   ---------->DOF2   --------->YAB1          ------->TEIL<------MYB83  --------->ANAC46      --------->TOE2(3) -->DOF2             --------->ICU4<---------MYB46(3)--------->ANAC58      --------->TOE1(2) >AHL20(2)          --------->ARR11(3) <------MYB46(1)  --------->WOX13(1) --------->TOE2(2) -AHL20(2)        <---------TOE2(3)--------->MYB52(2)--------->ANAC58     <---------ANAC55(2)       >   tgtaatgacaaactgaaattgagataatgaattttgtttgttggtagacagaaataagcaattattcaaaaacgatacctaagaaagtcaaggaaaatag  10553100                          --------->ARR14(2)                          <---------ARR14(2)                                                       *TSS                 --------->WRKY18(1)                                                       <---------ANAC46                <-----------HVH21                                                          <---------ANAC58               <------MYB46(1)<---------At4g35610                                          <---------ANAC58               <------MYB83   --------->At4g35610                      ---------->DOF2--------->DAG2 >>>>>>>>TBF1<--------P   --------->GLK1(2)                ---------->DOF2           ---------->DOF2   aagaagaacgatagagttggtcatggcaattctgctaaacatgttagacatggagaagagagaaagagggagataaagactgagggagaaagtgcttgta  10553200                                                                                       <---------YAB1                                                                                 <---------AHL20(2)                                                                               <---------YAB1                                                                             -------->ATHB1                                                                             <---------ICU4                                                                             <---------AHL20(2)                                                                             --------->YAB1                                                                             <--------HAHB4                                                                             --------->ATHB51                                                                             -------->HAHB4                                                                            <---------YAB1                                                                            --------->ICU4                                                                            <---------ATHB51                                                                          --------->YAB1                                                                          <--------HAHB4                                                                          <---------ICU4                                                                         --------->ICU4<---------AHL20(2)                                                                  ----------->HVH21  --------->YAB1                                                                  <----------ID1<---------AHL20(2)             --------->AHL20(2)                        <---------PCF2    --------->AHL20(2)    <-----            <---------ATHB12                 ----------->GT1      <---------DEAR3(1)<---------AHL20(2)        ------------>CBF     --------->CCA1(2)        <----------ID1<------NtERF2--------->AHL20(2)   ------------>CBF         --------->ARR11(3)    --------->CCA1(2)------>NtERF2--------->AHL20(2)  --------->GLK1(2)--------->ALFIN1        <------------CBF      --------->ATERF1(1)--------->AHL20(2)   agagaatcaatgcaatgaaatgtggggatagatatagagatgaagaattgagaaatgggaccaagtaggcgacgaataattattaatttataatttagag  10553300                                                                                      --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)             <---------ANAC58                                                     <---------ATHB51             <---------ANAC58                                     <---------YAB1--------->YAB1    <----------DOF2                                    --------->DAG2 --------->AHL20(2)           <- <-----------GT1   <----------DOF2                    ---------->DOF2 <---------AHL20(2)           -- ----ZAT6<----------DOF2<----------DOF2              --------->YAB1  <---------WOX13(1)     ---------   ataatactttactttgcctgcctttgttttatggtgagacatagggtttctacaataaaagtgacaatatgattaattccaaaaataattcaataagtta  10553400               --------->MYB52(2)             <---------MYB52(1)   --------->AHL20(2)            <------MYB46(1)                   --------->YAB1 --------AHL20(2)                <------MYB83                      ----------->GT1 ------->AHL20(2)               --------->MYB59         <---------HSFB2a(2) -->GT1<-----------GT1         <--------P               --------->HSFB2a(2)       <---------ZAT6    <   tttaaatttatactcgttagttttgtaatgggagtaggtttggcaataggtttatcttatggaagtctattgtaaaaatagatagtgtttgccaaaaaca  10553500                                                                                 <---------ALFIN1                                                                               ----------->RAV1(1)          ----------->RAV1(1)                    --------->AHL20(2)       <----------DOF2 ----------DOF2      --------->YAB1         ----------->GT1       <---------GLK1(2)             <----   ttctttgtgaggcaacatgggtttcataaaacattttggacccaagaagaaaaaaatatgacatcttagattgtctctttccaacacattgccaactatg  10553600                                                                     ----------->GT1                              <---------ANAC46                      ----------->GT1                            --------->ZAT18                        --------->ALFIN1         ---------                        --------->DAG2                          --------->DAG2             <---------YAB1                       ---------->DOF2       <----------DOF2  ---------->DOF2        <---------ZAT18 -------HVH21  --------->AHL20(2) ---------->DOF2       ---------->DOF2              --------->ZAT18   tcagtccaaaaaaaaaaaaaaatgaaaaagtggcctaaaagaagacactttcttcagacaaaggcaaaggtgggaaaaattgaattgcccactataatag  10553700  Previous    Next  AGI:  At1g30080.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT4G18340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40321.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 10550931    to: 10553199    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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