Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------At4g35610                        <-----------ARR10                     <---------GLK1(2)                 <---------ZAT14                 --------->At4g35610                 --------->ZAT14                 <---------At4g35610                                               --------->TOE1(3)             --------->MYB52(1)   --------->REM1(1)     <---------AHL20(2) <----------DOF2            ----------->HVH21 --------->At4g35610       --------->AHL20(2) ------>ZmHOX2a(1)          --------->At4g35610 <---------ZAT2     --------->AtLEC2---------->DOF2   --------->TOE2(3) ---DOF2  <---------At4g35610 --------->ZAT2  <-------TEIL     --------->YAB1   <-----------GT1------   gtttcgcatttgaactgactgcagagtctctcagctacagcaagaagattcatgctaattaaaaatcaaaagtagtcctttttaacctcaatccaagaga  10547700         --------->ATHB51         --------->AHL20(2)         <---------AHL20(2)         <--------ATHB1         <---------ICU4                                                                             -        <---------YAB1                                 --------->YAB1                <---------GLK1(2)        --------->ICU4              --------->YAB1  --------->YAB1                 --------->LBD16  -      --------->YAB1        ---------->DOF2 <-----------GT1    --------->YAB1     --------->HSFB2a(2)     <---------YAB1   --------->ZAT14   <---------AHL20(2)    <---------ATHB12    <---------HSFB2a(2) --->CCA1(2)    <-----------HVH21  <---------YAB1  <---------YAB1          ---------->DOF2          -   taagtttataataatttcagtcacagaactcaaagttatcatttttttgccttataatcatccaatgaagactaaatcaaagctccagaaactgagacac  10547800                               <---------HSFB2a(2)                               --------->HSFC1(1)                               <---------HSFC1(1)               --------->MYB52(1)            --------->ANAC46   --------->HSFB2a(2)                     <---------MYB111(1)         <-------TEIL         <---------LBD16                 --------->CCA1(2)        --------->MYB52(1) -------->ANAC58         --------->ARR11(3)                 <---------At4g35610      <---------MYB59 -------->ANAC46 --------->ANAC58                   ----------------->AGL1 --------------->AGL15   <- -------->ANAC58 --------->ANAC58              <---------TOE2(3)       --------->MYB46(3)--------->MYB46(3)   acacacaaacatacacagaacgaaatagttcttctggaaactaaaaactaatgttccatttcagataagagcaactactacttatagcctaaccattgta  10547900                                              --------->HSFB2a(2)                                              <---------HSFB2a(2)                                         <---------HSFC1(2)                                         <---------HSFB2a(1)                                     <------MYB83                                     <------MYB46(1)                           --------->DAG2--------->HSFB2a(1)                         ---------->DOF2 --------->HSFC1(2)                    ----------->GT1 --------------->AtSPL8                   --------->DAG2   --------------->AtSPL3            <---------ANAC46        <---------------AtSPL8            <---------ANAC58        <---------------AtSPL3            <---------ANAC58     <---------ARR14(2)          <---------LBD16       <---------ICU4----------->GT1--------->MYB59       --------->ARR11(3) -----ZmHOX2a(1) ---------->DOF2 --------->ARR14(2)      <---------GLK1(1)               <---------ARR11(3)   aggaaacgattatggcgagaaaagggtaaaagggggatttggtaccttctccaagtttgaaatctcggaattgatgagattgagaacacgaggtctcttg  10548000                    --------->ARR11(3)              <---------ANAC58                  ------>NtERF2                                       <              ----------->RAV1(2)               --------->LBD16           <----------DOF2           -              <---------ANAC46                 --------->ANAC58          <---------DAG2             -              <---------ANAC58   --------->ANAC58                   --------->At4g35610            <-          <---------At4g35610    --------->ANAC58             --------->TOE2(3)               -------      <---------HSFB2a(2)      ---------->DOF2 --------->ANAC46     <---------At4g35610  --------->ANAC46      --------->HSFB2a(2)     <---------ATHB12 --------->ANAC58  ---------->DOF2         --------->ANAC58     <---------LBD16<---------ARR11(3)<---------ALFIN1    <---------AHL20(2)             --------->ANAC58   gcgatgttctggagttgcctgagttcttccaaatcaagcccaacttcttccgccatggatataatcttagagcagccttttttcagagaaaacgaaacgt  10548100               <---------HSFC1(2)               --------->HSFC1(2)               --------->HSFB2a(1)               <---------HSFB2a(1)              <---------TOE2(2) ---------ARR14(2)                                                                       <---------HSFB2a(2) -------->GLK1(2)                                                                 ---------->DOF2 -------->ARR14(2)                       --------->ANAC58               <---------HSFB2a(2)    <----- --------GLK1(2)            <---------ANAC46  ---------->DOF2           --------->HSFB2a(2)    ------ ---->GT1     <---------TOE2(3)    *TSS  --------->ANAC58             <---------ANAC46   --------->HSFB2a(2)   agaatctggacagacgaaggttgcgaaattgtgtttatattacaagcacaaagcgaagggaacgagagagtcttgtggaaactagaaagtactagaagac  10548200                                                                                               <-----                                                                                            ---------         <----------DOF2                                                                   <---------AHL20(2)         <---------DAG2                                                                    --------->AHL20(2)  <------------CBF                       <----------DOF2         ----------->GT1  <---------YAB1<---- ----ARR11(3)          <---------At4g35610              --------->ANAC58     <------MYB46(1)<-------- --->ARR11(3)      <----------DOF2<----------DOF2       --------->ANAC58     <------MYB83  <---------AHL20(1)   ctcatattgagctttttgatgctttagcttcttgggctttcttctttcatacagagccaagcccatttagtaaaacatttggttatcaaacaattttttt  10548300                                                                                         ------->TEIL                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC55(2)                                                                                     --------------->AtSPL8    --------->At4g35610                                                            --------->ICU4    <---------At4g35610           <---------HSFB2a(2)                           --------->AHL20(2) ----AHL20(2)                     --------->HSFB2a(2)                      <---------ZAT18 >AHL20(2)                 <---------TOE2(3)                               --------->ZAT14          - -----AHL20(2)            ---------->DOF2  --------->GLK1(2)------>ZmHOX2a(1) --------->ANAC46     -- -AHL20(2)  <----------DOF2<---------TOE1(3) --------->TOE2(3)       <-----------GT1 <---------------AtSPL8   attttcagcagaaactttcactctatattaaagttactggaaaataatctaaaactttggtcctacatatttttctgtccacttaattatgtactctaaa  10548400                                                          <---------YAB1                                                       --------->AHL20(2)                                                       <---------AHL20(2)                   ---------                <-----------HVH21                 --------->AHL20(1)                        ---------             <---------YAB1<---------AHL20(2)     <---------AHL20(1)                  --------->ANAC58       --------->ICU4     --------->AHL20(2)      --------->AHL20(2)                  --------->ANAC58   ----------->GT1        <---------AHL20(2)      <---------AHL20(2)       <---------AHL20(2)   <----------ID1       --------->TOE2(3)        <---------AHL20(2)        --------->AHL20(2)  ----------->GT1       <----------DOF2          --------->AHL20(2) <-----------GT1--------->ANAC46 -------->DAG2 --------->ANAC46             <------ZmHOX2a(1)   <---------GLK1(2)<-----------GT1   -- -------->DOF2 --------->WOX13(1)   --------->GLK1(2) --------->AHL20(2)   <---------AHL20(1)     ---   aaaaagggaaaaattatcagtcacatctttaaattgatattctataggaaaataaattttattctagattctactattttattttacgaagcaataaaaa  10548500                                                <---------ANAC58                                                --------->ANAC55(2)                                                <---------ANAC58                                      ======================HOX2a_HOX2a                                      ------>ZmHOX2a(2)                                     <---------GLK1(1)                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                                    <---------ARR14(2)                                    --------->ARR14(2)                                    <---------ARR14(3)                      <-----------GT1<---------HSFB2a(1)                   <---------AHL20(2)=======================HOX2a_HOX2a                 <---------YAB1     --------->ARR14(3)  <----------DOF2         --------->GLK1(2)     ---------->DOF2<-----------GT1<---------MYB59 >AHL20(2)      <---------AHL20(2)  <-----------ARR10   <---------DAG2 --------->ANAC58 >YAB1  <---------GLK1(2)    --------->AHL20(2) <---------ANAC55(2)    --------->ANAC58 ------->DAG2   <---------AHL20(1) <------ZmHOX2a(1) ------>ZmHOX2a(1)--------->DAG2                - ------->DOF2 <---------YAB1 <---------AHL20(2)--------->MYB59       ---------->DOF2  --------->AHL20(2)   aaaagttttagattctattatttttttccatttaaaaggatcttcgagttacgtcctactttaccaaaatataaagcaattttctcatttttatatgctt  10548600  Previous    Next  AGI:  At1g30070.1    Description:  SGS domain-containing protein. similar to COP1-interacting protein-related [Arabidopsis thaliana] (TAIR:AT1G30060.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96441.1); contains InterPro domain SGS (InterPro:IPR007699); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Siah interacting protein, N terminal (InterPro:IPR015120); contains InterPro domain CS (InterPro:IPR007052) Range:  from: 10546575    to: 10548135    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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