Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ------>ZmHOX2a(2)                                                       <---------ARR14(2)                                                       <---------ARR11(3)                                                       --------->ARR14(2)                                                       <---------AGP1                                                       --------->ARR11(3)                                                      <---------CCA1(2)                                                   <---------ZAT14                                             ------>NtERF2                                            <---------bZIP60(1)                                            --------->ANAC58                                            --------->bZIP60(2)                                            --------->ANAC46                          ------>NtERF2                                            --------->ANAC58                      ------->GAMYB                                            --------->O2<------ZmHOX2a(2)         --------->ANAC46                                            --------->bZIP60(1)                   --------->ANAC58                                ---------->DOF2    --------->ZAT14                --------->ANAC58                             --------->YAB1 --------->DEAR3(1)                  --------->MYB52(1)                 <------ZmHOX2a(1)        <---------ATERF1(1)                 <---------MYB52(2)  <---------AHL20(2)      --------->YAB1 --------->DEAR3(1)                   --------->MYB46(3) --------->AHL20(2) <------ZmHOX2a(1)    ----------->HVH21             --------->CCA1(2) -->TOE1(2)   <-----------RAV1(2)--------->DAG2<---------ALFIN1  --------->MYB52(1)  --------->DEAR3(1)   ggatttaatagcacagccaggaggaccataatcaaaaagtccagcgacgccactgtagatcttaaacgaagggatatagaacaaacgccgctcgagagta  10462400                            ---------->DOF2                                               <---------HSFB2a(2)                           <---------MYB52(1)        --------->YAB1               <--------P                      --------->MYB52(1)            <---------ZAT6               --------->At5g28300                     ----------->HVH21      --------->LBD16                 --------->ETT(2)               ---------->DOF2      --------->MYB46(3) <---------YAB1      <---------HSFB2a(2)        <---------DAG2<---------ALFIN1    <---------LBD16                  --------->HSFB2a(2)        <----------DOF2   <-------GAMYB  --------->MYB52(1)             ------>ZmHOX2a(1) --------->HSFB2a(2)       <---------GLK1(2)  --------->At5g28300  <---------At4g35610 <---------At4g35610<---------GLK1(1)   ttgacaacagcttttcgaaaagcctcacggttaagcgaaccattaccggagctactgataatagactgaagctccttctcgacggtagatttctcgagct  10462500                                                    --------->ANAC58                                                    --------->ANAC58      --------->DOF5.7(2)                                               --------->ANAC58        <------NtERF2                <                                               --------->ANAC58      <---------DEAR3(1)  <---------LBD16                                              <---------LBD16       <---------ORA47(1) ----------->HVH21                              <---------GLK1(1)--------->ANAC46     --------->SPL7 <---------ZAT2   -                       <------NtERF2     --------->At4g35610      ----------->HVH21--------->ZAT2  <-                       <---------ZAT2    <---------At4g35610      <---------SPL7   <---------At4g35610                       <---------At4g35610   <---------ALFIN1 --------->ZAT2       --------->At4g35610                       --------->At4g35610  <---------ZAT14   <---------ZAT2  ----------->RAV1(2) <--   tcaatttgttgagttgctcaatggcagcatcgatttctggtttagctgcacgggaagccttgagagctcggacggcgttaccctgagcttcgacggatga  10462600                                        <------NtERF2                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC46                                     <------NtERF2                                     --------->ATERF1(1)                            <------ZmHOX2a(1)                ----------->HVH21   <---------ATERF1(1)                        <---------ANAC46        ---------->DOF2         <---------DEAR3(1)       ==================================HOX2a_HOX2a    --------->HSFB2a(2)      <---------ZAT14     --------->GLK1(2)             <---------ANAC58    <---------HSFB2a(2)      --------->ZAT2      <---------ARR14(2)            <---------ANAC58    <---------LBD16          <---------ZAT2     <---------GLK1(2)           <--------P         <----- ---------GLK1(1)  <---------ANAC46 --------->ABI4(2)    ------>ZmHOX2a(2) <-------GAMYB     -------- -------->GLK1(1) <---------LBD16   ------>NtERF2--------->ARR14(2)   <---------ARR14(2) <---------AtMYB61 --------ARR14(2)--------->MYB52(1)--------->ALFIN1    --------->ARR14(2)  <---------ANAC58  <------- ----ZmHOX2a(1)<---------WOX13(1)  <---------DEAR3(1)  <---------ARR14(2)  <---------ANAC58 <--------   ggatttctcggaaagagattgacggagagactgctcggtggcgtccatcggaatctggatcggagcgatggagattgggttgcgaaggattgtggtggtt  10462700                                                                                                    -                                                                                                   <-                                                                                                <----                                                                                              -------     <---------TOE2(3)             ---------->DOF2                                            <------ ----ANAC46       <---------ARR11(3)                  --------->ARR14(2)             *TSS     ------- ->MYB55(2)       --------->ARR11(3)                  <---------ARR14(2)      <-----------GT1 ------- --MYB46(3)       <---------ARR14(2)                ----------->ARR10      --------->MYB52(2)<------- -AtMYB61         --------->ARR14(2)       ------->TEIL <-------TEIL   --------->ALFIN1     <--------   tggaattgacgaagattgaagatttgttgtctgcgatgaaagacgaatgtagagaagatgcgcattcgacgaagtgtttgtttccacttactagtggccc  10462800                                                    <---------WOX13(1)                                                   <-------GAMYB -------->STY1(1)                                 <---------MYB46(3) --------MYB52(1)                                 <------MYB46(1) --NtERF2                                         <------MYB83                       ---------->DOF2 -->ATERF1(1)                                    <---------AtMYB61                ----------->GT1 ---PCF2                                         --------->MYB59              ---------->DOF2 -->PCF5                                     <------MYB83                     --------->YAB1  ------- -->TCP16(1)                                 <------MYB46(1)                 <---------ATHB12 <------ --ATERF1(1) --------->YAB1                --------->ALFIN1              ------------>CBF<---------ARR11(3) -ZAT18     <---------YAB1               --------->ALFIN1               --------->ANAC46 --------->ARR11(3)   ccttagggtttaagatgataatgtggaaacctttgggcccaaggagtgggtttggttgacgaaatgaaatctaaacccaataaagagtaaagacatttaa  10462900                                                                                                -----                                                                                                -----                                                                                              <------                                                                                              <------                                                                ------>MYB83             <------MYB83                                                                ------>MYB46(1)          <------MYB46(1)                     <---------ANAC58                         --------->MYB46(3)        <---------MYB46(3)                   <-----------GT1                            --------->AtMYB61         -------------                  ----------->HVH21                           <---------MYB46(2)        --------->MYB111(1)               ------->MYC3                                   <---------MYB111(1)       <------------           <---------REM1(2)                                 --------->ANAC58           --------->MYB59 --------->bZIP60(1) <---------ANAC58                        --------->ANAC46           --------->MYB46(2) <---------bZIP60(1)<---------TOE2(3)                        --------->ANAC58        --------->ATHB12 -->AHL20(2)   <-------MYC3                           <----------DOF2               <---------YAB1 ---AHL20(2)<---------ALFIN1                <-----------GT1--------->ZAT6          <---------TOE2(3)   atgtcatcacatctacacgtttgacgtttcaacatggatgcaaaattttccaaatgctttaacaccaaacaaatatgtgaacattgatgtttggtaccaa  10463000                ---------->DOF2             --------->HSFB2a(2)           ------>MYB83           --------->MYB52(1)         <---------MYB111(1)         <---------MYB46(2)         <---------MYB111(2)      <---------ALFIN1<-------TEIL                                                         <-------TEIL   --------->ANAC46   --------->ZAT18                      <---------TOE2(3)        <----------DOF2 ->MYB46(1)-------->P <---------ZAT18            --------->ARR14(2)               ------>ZmHOX2a(1) ->MYB83 --------->MYB46(3)                      <---------ARR14(2)            ---------->ID1 ---MYB59<---------MYB55(2)                 --------->ANAC46                   <-----------GT1 ---MYB111(1)<---------HSFB2a(2)      <<<<<<<<<GATA-1 --------->ZAT6          <-----------GT1 -->AtSPL8 ------>MYB46(1)      <---------MYB46(3)    --------->ANAC46   <----------DOF2  --------->CCA1(2) ---AtSPL8--------->MYB55(1)  <---------MYB52(1)--------->GLK1(1) <------------------------ANAC81  --   cttatccctcacctaccagaaaggtccactacgtttgtttatctataggcaaatccacactaatgtttttgtgttctttttttcctctttagatacacaa  10463100                                                                                      --------->At5g28300                                                                                     ----------->GT1                                                                                   <---------At4g35610                 <---------MYB59                                            <---------ANAC46                 --------->TOE2(3)    --------->ANAC58                    <---------ZAT14          <-              ------>MYB46(1)     --------->HSFB2a(2)                     --------->ZAT14     <------              ------>MYB83     <---------ARR14(2)                      <---------ANAC58       <------            <---------MYB59   <---------GLK1(1)    <---------YAB1      <---------ANAC46       <------            --------->AtMYB61------->TEIL---------->DOF2               <---------ANAC58       <------   ----------->GT1     <-------TEIL   --------->ANAC58         ---------->DOF2     --------->At4g35610 ------->ARR11(3)--------->TOE1(3)<---------HSFB2a(2)     ---------->DOF2 --------->ZAT18     <------   atatgttgtcaaaaccaaacctaaatgcatgcatttctgtaagcaaaggcattgcgattagaaagaaaagtttgtgtgcagtgagagctgtaaattgcgt  10463200                                                                                                   <-                                                                                                  ---                                                                                                  ===                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                =====                                                                                               ------                                                                                              -------                                                                                              -------                                                        --------->AHL20(2)                    -------                                                        <---------AHL20(2)                    <------                                                        <---------ICU4                        =======                                                        <--------ATHB1                       <-------                                              ----------->GT1                                <-------                                              --------->ANAC55(2)                            <-------                                              <---------ANAC55(2)                            --------                                         --------->AHL20(2)  <-----------GT1                 --------        --------->YAB1                  --------->ICU4  --------->ATHB51                    ---------  ------->GAMYB                    ----------->GT1     --------->ICU4                       =========  --------->TOE2(3)              --------->ICU4      --------->YAB1                         -------->P --------->MYB46(3)           --------->AHL20(2)    --------->AHL20(2)                      ------>MYB46(1) ----------GT1              --------->ANAC55(2) --------->AHL20(2)                        --------->AtMYB61 ---ANAC58                  --------------->AGL15   <---------AHL20(2)      --------->ANAC58--------- ---ANAC55(1)             <---------AHL20(2) <---------ICU4--------->AHL20(2)     ------->GAMYB------ ---ANAC58 <---------GLK1(2)<---------------AGL15  --------->ICU4           --------->ANAC58------>MYB83 ---ANAC46--------->At4g35610 <---------AHL20(2)<---------AHL20(2)      <------ZmHOX2a(1)--------->MYB46(3) ---ANAC55(2)             <-----------GT1<---------AHL20(2)<---------AHL20(2)    --------->MYB46(3)--   ataaccacaatcagattacctctgtaatttacttaattagtaattaataagtaattaataatttaacaattagaggagaggcaatcgccaaaccaaccaa  10463300  Previous    Next  AGI:  At1g29880.1    Description:  glycyl-tRNA synthetase / glycine--tRNA ligase. Identical to Glycyl-tRNA synthetase 1, mitochondrial precursor (GLYRS-1) [Arabidopsis Thaliana] (GB:O23627;GB:Q8LBY0;GB:Q949T7); similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT1G29870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68394.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68699.1); similar to H0209H04.1 [Oryza sativa (indica cultivar-group)] (GB:CAH66534.1); contains InterPro domain Aminoacyl-tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Anticodon-binding; (In Range:  from: 10459462    to: 10462785    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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