Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                               <-----                                                                                             --------                               --------->TOE2(2)                                             <-------                               --------->TOE2(3)                                             --------                         --------->YAB1                                                     <--------                         <-----------GT1           ------>ZmHOX2a(1)                        ---------                      <---------ICU4               <----------DOF2                          <--------                      --------->YAB1       <---------ARR14(2)                               ---------                     <---------YAB1        --------->GLK1(2)                    --------->GLK1(2)<---                     <---------AHL20(2)    --------->ARR14(2)                   <---------ARR11(3) <-------TEIL      --------->YAB1      --------->YAB1                           --------->ARR11(3)   acatacatatcaaacccagatttataattacaacctaagtatcaaaatccgtcctttgctactattcttcaccaaaatcaaaaatctaattcaaattatt  10437200        <---------TGA2(1)        --------->bZIP60(1)        --------->O2        <---------bZIP60(1)        <---------bZIP60(2)        <---------ANAC58        --------->TGA2(1)        <---------ANAC58        --------->TGA1a        <---------O2     ----------->TGA1     ----------->HVH21                          --------->MYB52(1)   --------->MYB52(2)                           ------>MYB46(1) <---------MYB52(1)                           <---------MYB111(1) -------GT1                           --------->ZAT2                                   --------->LBD16 ----YAB1            --------->ATHB12 --------->At4g35610                         --------->ARR14(2) ->ATHB51           <---------YAB1    <---------ZAT2                              <---------ARR14(2) --ICU4 <---------ANAC46              ----------->RAV1(2)                        <---------GLK1(1) >ATHB1----------->STF1               <---------At4g35610                    --------->ANAC55(1) -ATHB51<---------TGA1a              ------->TEIL>>>>>>>>>MYB98              --------->ANAC46 >AHL20(2)   <---------ZAT14    --------->YAB1<---------MYB46(2)             --------->ANAC58 -AHL20(2)   --------->ZAT14   --------->ICU4 <---------MYB59                --------->ANAC58    <--- >ICU4<---------TGA2(2)        <---------ATHB12 ------>MYB83     ----------->GT1 --------->GLK1(1)  - ------At5g28300   <---------GLK1(2)<-----------RAV1(2)   ---------->DOF2  <---------ALFIN1  <-------TEIL   accgtttgtgacgtctgtacagattattgaacaatgatgcagctggaacctaacaaaaaaaaaagagaggtaaacacacacgcaaatccctgatatacat  10437300                                                                                            <------NtERF2                                                                                ------>NtERF2                                               --------->HSFB2a(2)             --------->RAP2.3(3)                                               >>>>>>>ZML2                     --------->DEAR3(1)                                               <---------HSFC1(1) <---------TOE2(3)        ------>NtERF2                                               <---------HSFB2a(2)--------->MYB59      <-----------RAV1(1)   ------->TEIL        ----------->GT1         --------->HSFC1(1) <---------TOE1(3) --------->ATHB12 ----TEIL    <-------TEIL      <---------TOE2(3)      ----------->GT1         --------->DEAR3(2) -------->AtLEC2--------->ANAC46       --------->TOE2(2)   ---------->DOF2   --------->At4g35610   acatgcacataaacatacacgaagagggtgattttggttaacctgtgttctagagattgagaaaagtttaggtagcaagagccgactcattggtgccgaa  10437400                   <---------ANAC46              --------->HSFC1(2)              <---------HSFB2a(1)              <---------HSFC1(2)              --------->HSFB2a(1)        --------->At4g35610        <---------At4g35610     --------->LBD16                                        ----------->GT1    <---------ANAC58           ----------->GT1            <---------ANAC46                *TSS    <---------ANAC46--------->LBD16            --------->YAB1                             <-------GAMYB    <---------ANAC58<---------LBD16           <---------ATHB12                           ----------->GT1   <---------LBD16<---------LBD16    <---------ICU4    --------->ALFIN1                  <---------MYB46(3) <---------MYB52(1)<---------LBD16  --------->ICU4 ---------->DOF2 <----------ID1       <---------TOE2(3)   gccgttgcggagcagaaatttccggggagagttttgtaatacttactaatcgtgaaagtgaggggttaaatgacaaaatttcttaagtttgtggttaaat  10437500                                                                          --------->YAB1                                                              <----------DOF2                                                             <---------ANAC46              ----------                                        <---------CCA1(2)    <---------ANAC58      <---------ANAC58                           --------->ARR11(3)     <---------ANAC58 <---------TOE2(3) ----------->GT1     --------->GLK1(2)   <---------ARR14(2)       <---------ANAC58---------->DOF2  <---------ANAC58    <---------GLK1(2)    --------->ARR14(2)   ---------->DOF2<---------ANAC58  --------->ICU4      --   ctgtaagaatctaaaacatatggagcaaatatgttgacgcgcgtctcttaaagcttgctacttgcttttaaagtattcgtaattagggtgtcaaaaagaa  10437600                    <------------CBF                   <---------ICU4                  <---------YAB1                                                               ------          --------->DAG2           ==========================RAV                               <-----         ---------->DOF2           --------->ALFIN1 ----------->GT1                            ------    --------->CCA1(2)              <---------ZAT6----------->RAV1(2)                 --------->GLK1(2)   <---------ARR11(3)    <---------ZAT18         --------->At4g35610                <---------ARR11(3)   --------->ARR11(3)   <---------ANAC58    --------->MYB59        ----------->RAV1(2)         <----- >DOF2----------->TBP   <---------ANAC58 *TSS    <---------At4g35610                --------->ARR11(3) -------->DOF2  --------->YAB1     <-----------RAV1(1)   ---------->DOF2          ----------->ARR10   gaaaagatataaaaagtatcaaaattgcgaactctgagtgttggattaggcatctggagaaaagagataacctgcttccatggtgagattttggtttctc  10437700       <---------ANAC58       <---------ANAC58       --------->ANAC55(2)      <---------TOE2(3)     <-----------GT1 --->HSFB2a(2)         <---------ARR11(3)                       --------->HSFC1(1)         ========== ----HSFC1(1)          --------->ARR11(3)  <------ZmHOX2a(2)    <---------HSFC1(1)         ------>ZmHOX2a(2) --->HSFC1(1)<----------DOF2              --------->ARR11(3)    --------->HSFB2a(2)      <---------ARR11(3) ----HSFB2a(2) --------->ATHB12           <---------ARR11(3)    <---------HSFB2a(2)      --------->ARR11(3)   gaaagttttacgtttctttattggagatttttgactaaattagagatcacatttaagttgaattctctagaaaccagtagaaactttgtatgatcttatc  10437800                                                                           <---------At4g35610                                                                   <-----------GT1                     --------->TOE2(3)                             <---------AHL20(2)                  <---------CCA1(2)                             --------->YAB1                 ------>ZmHOX2a(1)               <-------TEIL   <---------ICU4                    <--           ------->TEIL                     <---------ICU4     --------->ICU4                   -----           <---------ARR14(2)               --------->YAB1     <---------YAB1                   -----           --------->ARR14(2)              <---------ATHB12   <---------AHL20(2)------->TEIL   ------          <---------CCA1(2)              --------->WOX13(1)  --------->YAB1--------->At4g35610 <----- =======================HOX2a_HOX2a  <----------DOF2  <----------DOF2 <----------DOF2       <--------   agtcgaatttgtgtatctccttatctcaataaacttgttctttcaatcatgttcatctttggattataattactttctgatgaacttgctatttctaatt  10437900                                                                                             <<<<<<<<                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                         --------->YAB1                                                                                        --------->ICU4                                                                                      --------->YAB1                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                   --------->TOE2(3)                                                                                   <----------DOF2                                                                               --------->LBD16  <----  --------->GLK1(2)                                                           <---------ANAC58  <---- -------YAB1                                                                  <---------ANAC55(2) ---->YAB1                                                                    <---------ANAC46  <---- ---->AHL20(2)           <----------DOF2                                      --------->ANAC55(2)   < --->ICU4          ----------->GT1<-----------GT1                             <---------ANAC58 ------ ----YAB1         <---------TOE1(3)                                          --------------->AtSPL3 < -YAB1            <---------TOE2(3)  --------->TOE2(3)                       --------------->AtSPL8 <   ataaattctgggcctactctaaggttactttgtttgaaacctcatcttcttgagtctaaagttttggaatttatgctattccgtactttaattatgttac  10438000           <---------ANAC46           <---------ANAC58           <---------ANAC58 <MYB98  <---------AHL20(2) -----ANAC58 -----ANAC46                  --------->ARR14(2)                <----------DOF2 -----ANAC58            <---------ANAC46              --------->MYB52(2) ---------ANAC58        <---------ANAC58            <---------MYB52(1) --->MYB52(2)           <---------ANAC58       <---------MYB46(3)     ------>ZmHOX2a(2) ---------AtLEC2   <---------MYB46(3)    <---------AtMYB61 <---------At4g35610             <---------YAB1 ---------ANAC58   <-----------RAV1(1)<---------ARR14(2)   --------->At4g35610      <----------DOF2   ttgcatgttattttcttgtatttgttgcgtcaaatttgcagttttggtgttgttgttagtttgctgctttgatctcatacaatgagctttgttatgtttg  10438100  Previous    Next  AGI:  At1g29810.1    Description:  dehydratase family. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63785.1); contains InterPro domain Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533) Range:  from: 10435358    to: 10437490    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g29820.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29830.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66903.1) Range:  from: 10437641    to: 10440770    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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