Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ARR14(2)                                                                     <-----------GT1                                      --------->YAB1           <------MYB46(1)    --------->GLK1(2)       <-----------HVH21              --------->AHL20(2)       <------MYB83<---------ATHB12 ---------->DOF2               ----------->GT1                <---------TOE1(2)   <---------ARR14(2) ->ZmHOX2a(1)               --------->MYB52(1)                <---------TOE2(2)   ------->TEIL   agagaaagttgtcatctatggaactcaaacaaatggagaataatatcaaataaaccaatagtcgtaggtattaacaaatcagtgaatctgaactaagaac  10437100                                                                                                <----                                                                                               <-----                                                                                             <-------                               --------->TOE2(2)                                             --------                               --------->TOE2(3)                                             --------                         --------->YAB1                                                     <--------                         <-----------GT1           <----------DOF2                          ---------                      --------->YAB1               ------>ZmHOX2a(1)                        <--------                      <---------ICU4       <---------ARR14(2)                               ---------                     <---------AHL20(2)    --------->ARR14(2)                   <---------ARR11(3)                     <---------YAB1        --------->GLK1(2)                    --------->GLK1(2)<--- <-------TEIL      --------->YAB1      --------->YAB1                           --------->ARR11(3)   acatacatatcaaacccagatttataattacaacctaagtatcaaaatccgtcctttgctactattcttcaccaaaatcaaaaatctaattcaaattatt  10437200        --------->TGA1a        <---------O2        <---------TGA1a        --------->O2        <---------ANAC58        <---------ANAC58        --------->TGA2(1)        <---------ANAC46        <---------bZIP60(2)        <---------bZIP60(1)     ----------->HVH21     ----------->TGA1                           --------->MYB52(1)   --------->MYB52(2)                           ------>MYB46(1) <---------MYB52(1)                           <---------MYB59 -------GT1                           <---------At4g35610                              --------->LBD16 ----YAB1            --------->ATHB12 --------->At4g35610                         <---------ARR14(2) --ICU4 <---------TGA2(1)             <---------ZAT2                              --------->ARR14(2) >ATHB1----------->STF1               ----------->RAV1(2)                        --------->GLK1(1) ->ATHB51           <---------YAB1    --------->ZAT2                         --------->ANAC58 -ATHB51--------->bZIP60(1)          ------->TEIL>>>>>>>>>MYB98              --------->ANAC58 >ICU4<---------TGA2(2)         --------->YAB1<---------MYB46(2)             --------->ANAC55(1) -AHL20(2)   --------->ZAT14   <---------ATHB12 ------>MYB83                 --------->ANAC46    <--- >AHL20(2)   <---------ZAT14   --------->ICU4 <---------MYB111(1)----------->GT1 <---------GLK1(1)  - ------At5g28300   <---------GLK1(2)<-----------RAV1(2)   ---------->DOF2  <---------ALFIN1  <-------TEIL   accgtttgtgacgtctgtacagattattgaacaatgatgcagctggaacctaacaaaaaaaaaagagaggtaaacacacacgcaaatccctgatatacat  10437300                                                                                            <------NtERF2                                                                                ------>NtERF2                                               <---------HSFB2a(2)             --------->RAP2.3(3)                                               >>>>>>>ZML2                     --------->DEAR3(1)                                               --------->HSFB2a(2)<---------TOE2(3)        ------>NtERF2                                               --------->HSFC1(1) <---------TOE1(3)    <-----------RAV1(1)   ------->TEIL        ----------->GT1         <---------HSFC1(1) --------->MYB59   --------->ATHB12 ----TEIL    <-------TEIL      <---------TOE2(3)      ----------->GT1         --------->DEAR3(2) -------->AtLEC2--------->ANAC46       --------->TOE2(2)   ---------->DOF2   --------->At4g35610   acatgcacataaacatacacgaagagggtgattttggttaacctgtgttctagagattgagaaaagtttaggtagcaagagccgactcattggtgccgaa  10437400                   <---------LBD16              <---------HSFB2a(1)              --------->HSFB2a(1)              --------->HSFC1(2)              <---------HSFC1(2)        --------->At4g35610        <---------At4g35610     --------->LBD16                                        ----------->GT1    <---------ANAC58           ----------->GT1            <---------ANAC46                <-------GAMYB    <---------ANAC46--------->LBD16            --------->YAB1                             *TSS    <---------ANAC58<---------LBD16           <---------ATHB12                           ----------->GT1   <---------LBD16<---------LBD16    <---------ICU4    --------->ALFIN1                  <---------MYB46(3) <---------MYB52(1)<---------ANAC46 --------->ICU4 ---------->DOF2 <----------ID1       <---------TOE2(3)   gccgttgcggagcagaaatttccggggagagttttgtaatacttactaatcgtgaaagtgaggggttaaatgacaaaatttcttaagtttgtggttaaat  10437500                                                                          --------->YAB1                                                              <----------DOF2                                                             <---------ANAC58              ----------                                        <---------CCA1(2)    <---------ANAC46      <---------ANAC58                           --------->ARR11(3)     <---------ANAC58 <---------TOE2(3) ----------->GT1     --------->GLK1(2)   --------->ARR14(2)       <---------ANAC58---------->DOF2  <---------ANAC58    <---------GLK1(2)    <---------ARR14(2)   ---------->DOF2<---------ANAC58  --------->ICU4      --   ctgtaagaatctaaaacatatggagcaaatatgttgacgcgcgtctcttaaagcttgctacttgcttttaaagtattcgtaattagggtgtcaaaaagaa  10437600                    <------------CBF                   <---------ICU4                  <---------YAB1                                                               ------          --------->DAG2           <-----------RAV1(1)   ---------->DOF2                       <-----         ---------->DOF2           <---------ZAT6--------->At4g35610                           ------    --------->CCA1(2)              ==========================RAV                     --------->GLK1(2)   <---------ARR11(3)    <---------ZAT18         ----------->RAV1(2)                <---------ARR11(3)   --------->ARR11(3)   <---------ANAC58    --------->MYB59                         --------->ARR11(3) >DOF2----------->TBP   <---------ANAC58 *TSS    <---------At4g35610              ----------->ARR10 -------->DOF2  --------->YAB1     --------->ALFIN1 ----------->GT1----------->RAV1(2)         <-----   gaaaagatataaaaagtatcaaaattgcgaactctgagtgttggattaggcatctggagaaaagagataacctgcttccatggtgagattttggtttctc  10437700       --------->ANAC55(2)       <---------ANAC58       <---------ANAC58      <---------TOE2(3)     <-----------GT1 --->HSFB2a(2)         --------->ARR11(3)                       --------->HSFC1(1)         ------>ZmHOX2a(2) ----HSFC1(1)          <---------ARR11(3)  <------ZmHOX2a(2)    <---------HSFC1(1)         ========== --->HSFC1(1)<----------DOF2              --------->ARR11(3)    --------->HSFB2a(2)      <---------ARR11(3) ----HSFB2a(2) --------->ATHB12           <---------ARR11(3)    <---------HSFB2a(2)      --------->ARR11(3)   gaaagttttacgtttctttattggagatttttgactaaattagagatcacatttaagttgaattctctagaaaccagtagaaactttgtatgatcttatc  10437800                                                                           <---------At4g35610                                                                   <-----------GT1                     --------->TOE2(3)                             <---------AHL20(2)                  <---------CCA1(2)                             <---------ICU4                 ------>ZmHOX2a(1)               <-------TEIL   --------->YAB1                    <--           <---------ARR14(2)               --------->YAB1     <---------YAB1                   -----           --------->ARR14(2)               <---------ICU4     --------->ICU4                   -----           ------->TEIL                    <---------ATHB12   <---------AHL20(2)------->TEIL   <-----          <---------CCA1(2)              --------->WOX13(1)  --------->YAB1--------->At4g35610 ------ =======================HOX2a_HOX2a  <----------DOF2  <----------DOF2 <----------DOF2       <--------   agtcgaatttgtgtatctccttatctcaataaacttgttctttcaatcatgttcatctttggattataattactttctgatgaacttgctatttctaatt  10437900                                                                                             <<<<<<<<                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                         --------->YAB1                                                                                        --------->ICU4                                                                                      --------->YAB1                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                                   <----------DOF2                                                                                   --------->TOE2(3)                                                                               --------->LBD16  <----  --------->GLK1(2)                                                           <---------ANAC55(2) -------YAB1                                                                  <---------ANAC58  <---- ---->AHL20(2)                                                                --------->ANAC55(2)   < ---->YAB1               <----------DOF2                                      <---------ANAC58  <---- ----YAB1          ----------->GT1<-----------GT1                             <---------ANAC46 ------ --->ICU4         <---------TOE1(3)                                          --------------->AtSPL3 < -YAB1            <---------TOE2(3)  --------->TOE2(3)                       --------------->AtSPL8 <   ataaattctgggcctactctaaggttactttgtttgaaacctcatcttcttgagtctaaagttttggaatttatgctattccgtactttaattatgttac  10438000  Previous    Next  AGI:  At1g29810.1    Description:  dehydratase family. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63785.1); contains InterPro domain Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533) Range:  from: 10435358    to: 10437490    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g29820.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29830.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66903.1) Range:  from: 10437641    to: 10440770    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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