Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->REM1(1)                   --------->ANAC58                       --------->MYB46(3)                   --------->ANAC58--------->RVE1(1)    ----------->RAV1(1)                 <--------         --------->MYB46(3)    --------->AHL20(2)<---------ANAC58                           ---------         --------->DEAR3(2) --------->YAB1       <---------ANAC58     <-----------GT1      <---------ATHB12      <------ZmHOX2a(1)    <---------YAB1        <---------ANAC55(2)<-----------GT1      --------->WOX13(1)    <---------TOE2(3)    --------->YAB1 --------->At4g35610      <---------ICU4  ---------->ID1   tcgactaaggaacagacacagaagcaaacatcataaaatatcagttcaattacttgagcaacaacaagaattacactcttcttggccttaacaatcatca  10419800                                        ------->GAMYB            --------->REM1(1)                  <                                        --------->AtMYB61     <---------ANAC58                 ------                                        --------->TOE2(3)  <---------WOX13(1)                 <------                                       --------->MYB46(3)<---------ICU4                     ---------                                      -------->P         <--------ATHB1                     <--------                       --------->HSFB2a(2)               --------->ATHB12                --------->YAB1                       <---------HSFB2a(2)          <---------YAB1              <------ZmHOX2a(2) --- ---------->DOF2  <---------AHL20(2)--------->MYB46(3)  <---------YAB1         <---------ARR11(3) <-- -ICU4  <------ZmHOX2a(1) <<<<<<<ZML2--------->WOX13(1) --------->ICU4         --------->ARR11(3)<--- >YAB1 ----------->GT1 <---------HSFC1(1)  ----------->RAV1(1)<---------ANAC58<------ZmHOX2a(1)<-----   aactaaagcaggataaacaatttatctagaactcttcatcaaccacaacaaaatatgaatgattgcttcaacagtttataggatcatcaattcatcatca  10419900    <---------ICU4 --------->YAB1 <---------ICU4 ---------YAB1 --->YAB1 ---YAB1                                                                                    --------- >YAB1                                                                                      --------- -ICU4<---------ANAC55(2)                                                           <---------ARR14(2) ------>YAB1                                                                 <---------WRKY12 -------ICU4                                           <----------DOF2       <---------WRKY38(1)   -- ------YAB1            <---------ATHB12             <---------ARR11(3)      --------->WRKY18(1)------ ----ICU4 ---------->DOF2   ----------->GT1         --------->ARR11(3)     <-----------HVH21---------   tcatcatcatgtgaaagaaggcctaatgaagagtttaatacaaaaatatgacaagttctttctcaaggtaactcaatggtcaaggggattcaaaccataa  10420000                                         --------->ANAC58  <---------GLK1(2)                                    <---------ATHB12       <---------ARR11(3)  --------->YAB1                  ------>MYB46(1)          --------->ARR11(3) <---------ATHB12     --------->TOE2(3)  --------->ANAC46  --------->ARR14(2)              ---------- >YAB1        <---------AHL20(2)  ------>MYB83      --------->At4g35610                <---------AHL20(2) >TOE1(3)    --------->AHL20(2) <---------MYB59     ----------->RAV1(2)                --------->AHL20(2) ------->WOX13(1)     --------->TOE1(3)  --------->ANAC58  <---------ARR14(2)      --------->AHL20(2) --->YAB1 --------->ATHB12    ------->TEIL      <-----------GT1                    --------->YAB1 >TOE2(3)--------->ICU4  --------->MYB52(1)   <---------ATHB12                  --------->WOX13(1)   tcaatcaaaaaatgatttaataaaccctaatggacctaatcacacccaattaacacctgcagattttggactcaaaaaacttcaattaaaaaaatgaaaa  10420100                                --------->YAB1           --------->LBD16      <---------ICU4         --------->At4g35610   --------->ICU4     <-----------HVH21         <---------ATHB12                   <---------------AGL15     <-----------TGA1         ------>MYB83                        --------------->AGL15    --------->O2              ------>MYB46(1)                    ----------------->AGL1    <---------O2<-----------RAV1(1)                              ----------------->AG    --------->ANAC46  <---------RAP2.3(1)                        ----------------->AGL3    --------->bZIP60(2)<---------At4g35610                       <---------------AGL15    --------->ANAC58 <---------RAP2.6(2)                         --------------->AGL15    --------->TGA1a  <---------ANAC58                            <-----------------AGL3            --    --------->ANAC58 <---------ANAC46                            ----------------->AGL2 --------->AHL20(2)  <---------ALFIN1   <---------ANAC58<---------GLK1(1)     --------->YAB1      <----------DOF2    ---  --------->MYB52(1)<---------LBD16  --------->GLK1(1)    <---------YAB1 ----------->GT1<---------AHL20(2) ->GT1   <---------LBD16     --------->WOX13(1)  ----------->RAV1(1)  ---------->DOF2   --------->AHL20(1)   accccaacgtcaccggaattgttgcggctaccaatcatgaaatcccatttccaacagataatgaaaacccaaaaaaggaaactttacaaataaaatgaga  10420200                                                                               <---------------AGL15                                                                               --------------->AGL15                                                                              ----------------->AG                                   --------->GLK1(2)                          ----------------->AGL3                                   --------->ARR14(2)                  --------->AHL20(2)                    <---------ARR14(2)                                 <---------AHL20(2)                    --------->ARR14(2)        ---------->DOF2         <---------AHL20(2)                    --------->GLK1(2)     --------->DAG2              --------->AHL20(2)---------->DOF2 ------->DAG2      <---------GLK1(2)*TSS ---------->DOF2    --------->DAG2    ----------------->AGL2 ------->DOF2 <---------AtLEC2    <---------GLK1(2)        ---------->DOF2 <-----------GT1    -------   aaaaggagcaaactttgcatagaatctgtaaacccagaatccaaaaaggaaagagaaacgataaagttcaaatttttttacccaaaaacagaaaggaagt  10420300           --------->HSFB2a(1)                                  <---------ICU4          -------->P    --------->At5g28300                     -------->HAHB4                    <--          ------>MYB83 ----------->GT1                          --------->ATHB12                 <---        --------->AtMYB61                        <---------AHL20(2)                              ----       --------->MYB46(3)                 --------->ZAT6       <---------ATHB12          --------->ARR11(3)      >>>>>>>>>MYB2  <---------LBD16    <-----------GT1        --------->ICU4            <---------ARR11(3) ---->GT1 ------>MYB46(1)     <---------YAB1    --------->AHL20(2)                   ---------->DOF2   aacttgaaaaccaaccttcttgctgcggtaatttgatagcatttacactataaaatttgaagcaaatgatggcaaaaacagaaaatgcaaagatgttaag  10420400                                                      ----------->RAV1(1)              <<<<<<<<<TBF1                          <----------ID1           <<<<<<<<<TBF1                        --------->ATHB12        <<<<<<<<<TBF1                          <---------YAB1    <-----------GT1                          <---------GLK1(1) --------->ARR11(3) ----ZmHOX2a(2)          ------>NtERF2       --------->GLK1(1) <---------ARR11(3)            -------- ------ARR11(3)       --------->HSFB2a(2)   --------->ARR11(3)--------->CCA1(1)             --------- ----->ARR11(3)  <<<<<<<<<TBF1              <---------ARR11(3)--------->RVE1(1)             <--------   atcatttttcttcttcttcttcttctcggccaatatttgatacagagatatcattgcaacaaaaatatctctgtaaaacaatgtctcatcgaaaatgata  10420500                   ------>ZmHOX2a(2)                  --------->CCA1(2)        --------->MYB59                  <------ZmHOX2a(2)        --------->MYB46(2)                 <---------ARR11(3)      <---------MYB52(1)                 --------->GLK1(2)      <-------GAMYB                 --------->ARR14(2)    <---------MYB46(3)                               <---------ARR14(2)                 <---------AGP1        <------MYB46(1)                       --------->YAB1                 --------->ARR14(3)    <------MYB83                 <-------TEIL        --------->GLK1(2)                 <---------ARR14(2)    --------->MYB55(2)         --------->ARR14(2)    --------->ARR14(2)                 <---------ARR14(3)    --------->MYB52(2)         <---------ARR14(2)    <-----------ARR10     <---------HSFB2a(2)              <---------AtMYB61         <---------ZAT18<---------YAB1  <---------MYB52(1)                 <--------P              <---------ANAC46<---------ICU4 ->YAB1          --------->ARR11(3) <-------GAMYB       --------->ATHB12    --------->ICU4--------->TOE1(2) -->GT1        ----------->ARR10<---------LBD16        --------->ICU4   <---------TOE1(2) --------->TOE2(2) -YAB1     >>>>>>>>>TBF1  <---------AHL20(2)           <---------YAB1<---------ANAC46  <---------GLK1(2)   aatcgttagggaagaagaagatctgaattttttttctgggttggttaggcaagtgtgatgatttagtggattcgtagaattatgacagagaatctacgaa  10420600                                                                                    <---------YAB1                                                                                 --------->ICU4                                                                                 <---------YAB1                                                              <-----------GT1 --------->AHL20(2)               <---------MYB52(1)                         <---------AHL20(2)  <---------AHL20(2)           ------>ZmHOX2a(1)              <-----------GT1 --------->AHL20(2)  <---------YAB1       <-----------GT1             <----------DOF2  <---------ZAT6         <---------ARR14(2)   <----------DOF2              <-----------GT1  ------>ZmHOX2a(1)      <---------ANAC46   <---------DAG2         ----------->GT1<-----------GT1 --------->AHL20(2)--------->ARR14(2)   ctgtgcttttttcctcccttcgtttttctggttatttctttttttaacttcctagtgaaaaaaatttctatacagcgtatattattattagtcaaatttt  10420700  Previous    Next  AGI:  At1g29750.1    Description:  RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase. similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G14840.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G07650.1); similar to serine/threonine protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G53420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48003.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47999.1); contains InterPro Range:  from: 10413866    to: 10420236    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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