Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->SPL7          <-------TEIL                         <---------ALFIN1          <---------TOE2(2)                 --------->RAP2.6(2)          ------->TEIL                   --------->RAP2.3(3)          <---------TOE1(2)             --------->ATERF1(1)         <---------SPL1(1)             --------->ZAT2         <---------MYB52(1)            <---------ATERF1(1)       <---------ANAC58                <---------At4g35610                   ------->TEIL       <---------ANAC58                --------->At4g35610                 ------->PIF5      --------------->AtSPL3           <---------ZAT2      <---------ATHB12<-------PIF5    ------------------>SPL14        --------->LBD16   --------->ANAC46    --------->TGA1a   <----------DOF2                <---------LBD16     --------->ANAC58    =========================== ----->AtMYB61                 --------->At4g35610    --------->ANAC58    =========================== ----->RAV1(1)                 <---------At4g35610  <-----------RAV1(2)   <---------TGA1a --ZAT18<---------SPL7         --------->ZAT2 <---------ALFIN1         --------->ZAT18           <--- ->ZAT18<---------SPL1(2)      <---------ZAT2 --------->MYB46(3)    --------->ANAC58     --------->TOE2(3) >ALFIN1--------->LBD16        <---------GLK1(1)  --------->TOE2(3) --------->ANAC58  <-----------GT1   caaaactttccgtacgttttggctatgttcttgagctccggagcagccacaacctcaggcaatcgtggataagcccacgagcctgacttaacctcatatg  10378500                                                            <---------ANAC55(2)                                                            --------->ANAC55(2)                          ------>ZmHOX2a(1)               <-----------GT1         ---------->DOF2 --------->TOE2(3)            --------->ARR14(2)             <----------DOF2- ===================bZIP_DOF               <---------AHL20(2)                  --------->ANAC46    <- ===================bZIP_DOF          <-------TEIL    <---------ARR14(2)       --------->ZAT6      <- ------AtLEC2 <----------DOF2   ---------->DOF2  <-----------HVH21       ------>ZmHOX2a(1)<----------DOF2   catgagagtgccaaagcttttgctcatcctcagacaaagtttcatataatcggtcggatattacatattcaattcctgttaacacaactttgctataagt  10378600                                                                                               <-----                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                                                                     ----------->GT1     <---------WOX13(1)                                                              <---------ANAC58   <---------ICU4                                                                   <----------------   --------->ATHB51                                                              <---------At4g35610   --------->ATHB12                                                          <-----------HVH21 ------  <---------YAB1           ----------->GT1       <---------------AtSPL8   <---------At4g35610  <-----  --------->ICU4           --------->ANAC58      <---------------AtSPL3   --------->At4g35610-------- -------->YAB1             --------->ANAC58   ---------->DOF2        <---------At4g35610   --------->ANAC46 --------YAB1     <---------YAB1 --------->MYB52(1)               <-------TEIL <---------WRKY12------ ----------------AGL1<---------WOX13(1) ----------->GT1          --------->ALFIN1--------->At4g35610   tttcataattggcattcgatgtgattaacaagaaaaaacggtatgaaaaaaagagtaccgattagaggtgcatcggagcggtcagaggcgtaaacagcac  10378700                        <---------ETT(2)                        <---------ZAT18                       --------->ALFIN1                     <---------ANAC46                    <---------DEAR3(1)                    --------->ALFIN1                <---------DOF5.7(2)                            <---------ALFIN1               --------->WRKY38(1)                            --------->MYB46(3) ----ZAT14     --------->WRKY12                           <-----------HVH21 -------TaNAC69(2) <---------LBD16                       --------->bZIP60(2) --->ZAT14     ----------->HVH21                    ----------->HVH21         --------->DAG2 ----ZAT18    --------->DOF5.7(2)                   <------NtERF2            ---------->DOF2       -- ->At4g35610 <-------GAMYB                       <---------LBD16----------->RAV1(1)                <- --->ZAT18  <---------MYB46(3)   <---------MYB46(3)--------->LBD16--------------->AGL15      <-------   actgaaggaactcgtcgttgacgcggtggacatagtggtgagtccctattagccgggacatgtcaccaccatatatcgcaaaagtagagacatgagtgtt  10378800                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                    <---------ANAC58                              ---                                                    <---------ANAC46                              ---                                                    <---------ANAC55(1)                           ---                                                    --------->O2                                  ---                                                    <---------O2                                  ---                                                    <---------ANAC58            <------ZmHOX2a(1) <--                                                    <---------TGA1a          --------->HSFB2a(2)  <--                                    <------ZmHOX2a(2)                        <---------HSFB2a(2) ----                    <---------At4g35610             --------->ANAC55(2)      <-----------RAV1(2) ----                    ------>NtERF2  --------->ARR14(2)                    --------->GLK1(1)       ----           <---------MYB52(1)      <---------ARR14(2)                --------->TOE1(1)           ----          --------->LBD16         <---------DEAR3(2)--------->TGA1a  --------->TOE2(1)           ----    <-----------HVH21         ------>ZmHOX2a(2) --------->YAB1      <---------At4g35610         <----    <----------DOF2 --------->At4g35610--------->LBD16        <------------AtMYB77             ------  --------->At4g35610       <---------ARR11(3) <---------ATHB12     --------->At4g35610     <-------- ------->At4g35610 <---------DEAR3(1)------>ZmHOX2a(2)--------->ALFIN1  --------->SPL7     <---------YAB1 --------At4g35610 --------->DEAR3(1)<---------LBD16=======================MYC_MYB     <---------MYB59 --ZAT6 <---------LBD16 <---------AtLEC2     --------->WOX13(1) <-----------HVH21--------------->AtSPL3   catctgcttcaccggtaatcgccgctgcatgatcgtcgatccggcatcaatcagacgtgttgaaactgtcatcggacctccaggaggtacctgatcatcg  10378900        --------->ANAC46        --------->ANAC58        --------->ANAC58  ------>NtERF2  --------->At4g35610  <---------At4g35610 --------->DEAR3(1) --------->RAP2.3(2) -------->ATERF1(1) -------->DEAR4(2) ------NtERF2 -------->RAP2.3(1) --------RAP2.3(1) ---->NtERF2 --------ATERF1(1) ------->ABI4(1) ------>ANAC46 ------>RAP2.3(3) ------>RAP2.3(2) ------>ATERF1(2)            <---------ANAC58 ------>DEAR3(1)             <---------ANAC58 -------DEAR3(1)           <---------AHL20(2)                                 <---------ANAC46 -------ATERF1(2)     --------->AHL20(1)                                      <---------ANAC58 ----->DEAR4(2)       <---------AHL20(1)                                  <------------CBF ----->RAP2.3(1)      --------->AHL20(2)                            <---------MYB46(3) ----->ATERF1(1)      <---------AHL20(2)                            ----------->GT1 ----->ORA47(2)      --------->AHL20(2)                          <---------ANAC58 ----->ERF1     ------>ZmHOX2a(1)                                <---------ANAC46 -----ATERF1(1)--------->TOE1(3)                           <---------TOE1(3)  <---------AtLEC2 --->DEAR3(1)  --------->TOE2(3)                 <-----------GT1 <---------ANAC58      <----------DOF2 -ICU4---------->DOF2<---------AHL20(2)        *TSS        <---------TOE2(3)  <---------ANAC58<------   ccgccgctcaaagccatccttaattttattttcttggttacaattttgaattttctagtttatggtttcgtggttatattgcatgtaatcttttttgaat  10379000                                            --------->MYB52(1)                                         --------->ANAC58                                         --------->ANAC46                                         <---------ANAC55(2)                                         --------->ANAC58                 --------->AtLEC2        --------->ANAC55(2)                 --------->ANAC58    <-----------HVH21                   --------->ARR11(3)                 --------->ANAC58  ------->MYC3                          --------->KAN4(2)               <---------ANAC46    <-------MYC3                          <---------ARR14(2)               <---------ANAC58   <---------ANAC58                       --------->ARR14(2)         <-------TEIL             <---------ANAC55(2)                    <---------ARR11(3)     <---------YAB1               <---------TGA1a                       <---------GLK1(1)           - <---------AHL20(2)               <---------ANAC58                      <---------KAN4(1)   <-------- --------->AHL20(2)               --------->ANAC55(2)           ------->MYC3                --------- --------->YAB1<---------ANAC58   --------->O2                  <-------MYC3             <---------At5g28300 ---AtLEC2  --------->ANAC46      <---------O2       <-------TEIL--------->ALFIN1       <-----------GT1   gaattatatgatacatggcatgcatatttcatagaaacgtgtcacgaaacgggcatacatcgaccatgtgttgaatatcccactacaaatttacagctct  10379100                                                      <---------MYB59                                                   ------>MYB46(1)                                                   ------>MYB83                                ------                                                 ------->GAMYB                                 ------                            --------->LBD16      <---------MYB59                  ------>MYB46(1) ---     --------->AHL20(2) ------>MYB83  <---------AHL20(2)------>MYB46(1)           ------>MYB83 ------     <---------AHL20(2) ------>MYB46(1)          --------->AtMYB61                --------->MYB52(1)- <---------AHL20(2)     --------->MYB52(1)      --------->MYB46(3)      ------>MYB46(1)<---------ARR14(2) -------->AHL20(2)    --------->AtMYB61       --------->WOX13(1)        ------>MYB83   --------->ARR14(2) -At4g35610           <---------MYB59 --------->AHL20(2)------>MYB83    --------->MYB52(1)   -------- >At4g35610     --------->ANAC46<---------MYB59-------->P      <-----------HVH21 --------->MYB55(1)--   gatttaataaaatcgtctacaaaaccaaaccggaccaaaattaaaaatcaaccaaaccaaactcgtgtcaaaccgaacagaaccaaacggttcccataag  10379200                                                                 <------NtERF2                                                                --------->LBD16                                                               --------->RAP2.3(2)                                                               --------->LBD16                                                               --------->RAP2.6(2)                                                              <---------LBD16                                                              <------NtERF2                                                              --------->RAP2.3(1)                                                              --------->ATERF1(1)                                                             <------NtERF2                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                            --------->ATERF1(2)                                                            <---------DEAR3(1)                                                            --------->DEAR3(1)                                                            --------->RAP2.3(2)                                                            <---------ATERF1(2)                                                           --------->DEAR3(2)                                                           --------->ATERF1(1)                   <---                                                          <---------ATERF1(1)                    <---                                                          ------>NtERF2                          ---- ------->GAMYB                                         <---------LBD16                           <--- --->ANAC58                                        <----------DOF2                               ---- --->ANAC46                                <---------ANAC46--------->SPL7                       <---- ------>MYB52(1)     --------->ARR14(1)  --------->MYB52(1)--------->RAP2.3(1)          --------->RVE1(1) --->ANAC58        --------->ATHB12     ----------->TGA1 ------>NtERF2                 --------->ARR11(3) -------->MYB46(3)<---------YAB1        ----------->HVH21--------->ANAC46              <---------ARR11(3) -->DOF2          --------->ICU4      --------->At4g35610--------->LBD16   <---------ARR11(3)   <---- ------>P       --------->YAB1        <---------At4g35610<---------ATERF1(1)     --------->At4g35610   caaccgaaacatgtacaagaatgattcgctgtgcaaagaatgctgacggaaaactttcccggccgccggaaaaacaagaactcatctaaaatctctcaat  10379300                                 <-----------GT1                               --------->YAB1       --------->MYB46(3)     <<<<<<<<<ARR2                                                <---------AtMYB61 -----ATHB1         --------->ANAC58                                                       --------->ALFIN1 ------ICU4         --------->ANAC58  <----------DOF2                              >>>>>>>>>GT-1 ----->ATHB51       --------->ANAC55(1)                                       <-----------RAV1(2)<--- ------AHL20(2)     --------->ANAC55(2)                             --------->ANAC58     ------>ZmHOX2a(1) ----->AHL20(2)     --------->ANAC46 <---------DAG2                 --------->ANAC58 --------->ARR14(2) -----ATHB12        <---------ANAC55(2)                        ----------->HVH21----------->GT1  ---- -----ATHB51   --------->ZAT14<<<<<<<<<ARR1          <----------DOF2--------->ANAC46 <---------ARR14(2)   aatttagcaacgaatacttcacacgcaatacaatcttacccttttcaacgcctagctttgctccagtgacaagccaatgtccaggtaaatcctgtggtcc  10379400  Previous    Next  AGI:  At1g29680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G45690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47983.1); contains InterPro domain Protein of unknown function DUF1264 (InterPro:IPR010686) Range:  from: 10377776    to: 10378947    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g29690.1    Description:  CAD1 (CONSTITUTIVELY ACTIVATED CELL DEATH 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24290.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN81643.1); similar to hypothetical protein MA4_82I11.22 [Musa acuminata] (GB:ABF72020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48861.1); contains InterPro domain Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862) Range:  from: 10379006    to: 10382109    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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