Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ANAC58                                <----------DOF2                             --------->ARR11(3)                             <---------ARR11(3)                            <---------CCA1(2)                           <---------AHL20(2)                                <---------TOE2(3)                           <---------ARR11(3)                           --------->AHL20(2)                           --------->ARR11(3)                          <---------YAB1                           <---------AHL20(1)                        <---------ICU4                        --------->AHL20(2)                           <--------HAHB4                    --------->AHL20(2)                              --------->ICU4                    <---------AHL20(2)                              <---------YAB1                  <                   <---------ATHB12 <---------ANAC58              --------->YAB1                    -      ---------->DOF2  <---------AHL20(2)   --------->ZAT6        <--------HAHB4                    - --->TOE2(3)       --------->AHL20(2)      --------->ZAT18        <---------ICU4                   -- -->YAB1   ---------->DOF2 --------->AHL20(1)                    <---------YAB1                  ----   aaatattgaaaagaaaagctaataaataatatatctttgcctacgagcactacatagtagcaaattgatcattattatttaggcttcttaagaacacaga  10339500        <---------ANAC58        <---------AtLEC2        <---------ANAC58  ------>MYB46(1)  ------>MYB83                                          <---------HSFB2a(2) ---------ALFIN1                  <---------ANAC46      --------->HSFB2a(2) -------->DEAR3(1)               <-----------------------TaNAC69(2)              ----------->GT1 -------->AtMYB61              <---------ANAC58      <----------DOF2      <---------ANAC58 ------->MYB46(3)   <----------DOF2        --------->At4g35610            <---------ANAC58         <- ----->ANAC46------->TEIL      <---------ANAC58 ---------->DOF2        <----------DOF2             --   caccacccttgcatgaacctttctttgaagatggcttcgtgaaacagctaaaaagctttgagaagaaacccatctttcttgaactgtgaaaacaatattg  10339600                                                                               <-----------GT1                                                                        ----------->TBP                                          ------->TEIL    <---------ANAC58----------->TBP                                      --------------->AtSPL3            --------->AHL20(2)                 <----------DOF2      <---------------AtSPL3      <---------ALFIN1               ------->TEIL           --------------->AtSPL8    <---------ALFIN1          --------->MYB52(1)          ------->TEIL        <---------AtLEC2<---------AHL20(2) --------At4g35610                    <---------------AtSPL8    ----------->RAV1(1) ------->At4g35610               <---------AtLEC2         <---------ANAC58--------->AHL20(2)-------->P   gagctaaatcgctaatggactttttaggtgtttttgtatggatgtacctctattagacttgcatgcccacacatatatatataacaaaatgactaaccta  10339700                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                    --------->AHL20(1)                                                    <---------AHL20(1)                                                   --------->AHL20(2)                                               --------->AHL20(1)      --------->ATHB51                                <---------YAB1 <---------AHL20(2)      <---------ICU4                              --------->YAB1   --------->ARR11(3)     <---------MYB52(1)                          <---------ARR11(3)   <---------ARR11(3)     <---------YAB1                   <---------ANAC46     ----------->GT1    <------ZmHOX2a(1)                   ----------->GT1    <------ZmHOX2a(1)  --------->MYB59                          <--          ----------->GT1 --------->ARR11(3)   --------->AHL20(2)     --------->ICU4             <---          <---------ANAC55(2)<---------YAB1    <---------AHL20(1)  <---------YAB1               -----      <---------GLK1(2)   --------->AHL20(1)  --------->AHL20(2) <-----------GT1          <----------   gttacctagattatgtaaatcgtgtgaatatatcattataggatgtaaatatattaaattaggaagtttaccattatttctaaatgtatagtttacattt  10339800                                         --------->ZAT2                                         <---------At4g35610                                         --------->At4g35610                                       <-----------bZIP910(2)                                      --------->TGA2(2)                                     <<<<<<<<<<<AtbZIP1                                     <-----------HVH21                                     <-----------TGA1                                    --------->O2                                    <---------O2                                    --------->TGA1a                                    <---------ANAC55(2)                                    <---------TGA2(1)                                    <---------bZIP60(1)                                    <---------TGA1a                                    --------->bZIP60(1)  <---------AHL20(2)                --------->TGA2(1)  --------->AHL20(2)               ----------->STF1 <---------AHL20(2)                <-----------STF1 -------AHL20(2)        ------------>CBF <---------ZAT2         ----------->GT1 ------YAB1        --------->YAB1 <---------TGA2(2)         <---------YAB1    --------->ANAC46 ---->AHL20(2)<---------WOX13(1) ----------->TGA1          --------->AHL20(2) --------->ANAC58 -GT1        <------------CBF------------>CBF         ------>ZmHOX2a(1)       --------->ANAC58  <----   ttatttattttgtaagattgatcatattcaatacaatgacgtcagcagtctaattcctagttaaaatagaaaaaaaaaccacgcatttgagtatgggcct  10339900                                                                                                    <               --------->YAB1                                           <-------GAMYB         -------          <-----------TBP                        <---------MYB52(2)    <---------MYB46(3)   ---------      <---------ALFIN1                     ---------->DOF2     <---------At4g35610   --------->ANAC58      ----------->RAV1(1)                 <---------AHL20(2)   --------->At4g35610   --------->ANAC58 ------DOF2 --------->YAB1          <----------DOF2  --------->ZAT6  <---------MYB52(1)    ----------   ttaatgggccacatttatagtaatggaacaatactgggctttatataaagaactaactctctctcatctccgtctgttatactgggaacggactcgacgg  10340000                                                                                <---------LBD16                                                                                <---------HSFB2a(2)                                                                                --------->HSFB2a(2)                       ---------->DOF2                                         <---------ANAC46      --------->MYB52(1)                                                       <---------LBD16     <---------WRKY38(1)                                                    <---------ARR14(2)     <---------ZAT14 <-----------HVH21                             <---------GLK1(2)     --------->ZAT14------->GAMYB                           <-------GAMYB   --------->ARR14(2) ---------ZAT14    <------------AtMYB77          --------->YAB1    --------->ARR14(2) -->ANAC46       --------->MYB52(1)    ---------->DOF2     <---------MYB46(3) <---------LBD16 >MYB52(1)----------->GT1--------->ANAC58     --------->GLK1(1)    <---------ARR14(2) ->HVH21 ----------->GT1 --------->ANAC58     <---------GLK1(1) <---------TOE2(3)--------->LBD16-----   agcatagtgaacgggaaaataactgtcaagcgagcgagagagaaagagaaatcagaaatggtggttatggattctccagtttcggggagaatggctgatc  10340100                                                                           <------NtERF2                                                                          ------>NtERF2                                                                         ----------->HVH21                                                                         --------->DEAR3(1)                                                                         <---------DEAR3(1)                                                                        --------->ATERF1(1)                                                                       <---------ATERF1(1)                                                                       --------->LBD16                  --------->ANAC46                                     ------>NtERF2                -             --------->ZAT6                                           <---------DEAR3(1)<-----------HVH21       <------ZmHOX2a(2)                                    <---------TOE1(3)           --------->LBD16       ==================================HOX2a_HOX2a        <---------TOE2(3)   ---------->DOF2<----- ---->YAB1------>ZmHOX2a(1)       ------>ZmHOX2a(1)<---------ANAC46  <---------LBD16   <---------ANAC46   agaacatcgatcctaacaccacgacgagccctagtcctatagagaagcatgtttcggcgattaaggctatctccggcgacgagaaagctccgtcgaagga  10340200                                         --------->GLK1(1)                                      --------->LBD16                                     --------->HSFB2a(2)                                     <---------HSFB2a(2)                            --------->MYB52(1)                           --------->MYB55(1)                           ------->GAMYB---------->DOF2    <---------GLK1(1)                          <---------MYB52(2)               --------->GLK1(1)                          <---------MYB55(2)            --------->LBD16             <------NtERF2<---------MYB111(2)          --------->HSFC1(1)    --------->ARR11(3)    <---------MYB46(2)           --------->HSFB2a(2)                 ------>ZmHOX2a(1) --------->DOF2           --------->MYB46(3) --------->ZAT18                           ------>ZmHOX2a(1) -ZmHOX2a(1)<-----------HVH21 --------->TOE2(3)        <---------HSFB2a(2)           <---------ICU4   gaaaaagaactacgcgtcgaagaaatcaactaccgtaatccagaaatcgcactgtttccagaattcttggacattttggttcgataatccttcctccaaa  10340300                                                                                 ------->TEIL                                <----------DOF2                            ------>ZmHOX2a(2)                               ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                              <------ZmHOX2a(2)                          --------->ARR11(3)                             --------->AGP1                              <---------ARR11(3)                    <---------ARR11(3)                                   --------->AGP1<---------ANAC58                    --------->ARR11(3)                         <---------HSFB2a(2)     <---------ANAC58                   <---------At4g35610                         --------->HSFB2a(2)  <----------DOF2             <---------LBD16 <---------ARR11(3)               <---------LBD16   <---------CCA1(2)     --------->ANAC58        --------->ARR11(3)            <---------GLK1(1)<----------DOF2     --------->ANAC58  <----------DOF2           --------->MYB46(3)    ----------->ARR10   tcgaatcaagtcatatggggaagctctttgagatctttgtatacattcgctaccatcgaagagttctggaggtgagatctttgtatctttcttgttgtca  10340400  Previous    Next  AGI:  At1g29590.1    Description:  eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative. Identical to Putative eukaryotic translation initiation factor 4E-5 [Arabidopsis Thaliana] (GB:Q9C7P2); similar to eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G29550.1); similar to eukaryotic translation initiation factor 4E [Lactuca sativa] (GB:AAP86602.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) Range:  from: 10339923    to: 10341614    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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