Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->DEAR3(1)                                                                               ------->GAMYB                                                                              <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                              --------->MYB46(3)                                                                              <------------AtMYB77                                                                              --------->DEAR3(2)                                                                             -------->P                                                                         --------->CCA1(2)                                                                         <------ZmHOX2a(2)                                                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                             ------->TEIL               --------->AGP1                                --------->AHL20(2)                      <---------ARR14(2)          -                                --------->ATHB51                        <---------ARR11(3)          <                                --------->ATHB12                        --------->ARR11(3)        ---                                <---------AHL20(2)                      --------->ARR14(2)        <--                               <---------AHL20(1)         <---------AHL20(2) ------>MYB46(1)     ----                               --------->AHL20(2) <---------ANAC58     --------->GLK1(1)         <---                       <-----------HVH21  --------->ICU4 --------->AHL20(2)  ------>MYB83       <xxxx                    --------->YAB1   <------MYB83 <---------ANAC46     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------AtLEC2   <---------ICU4   <------MYB46(1)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------ <---------ANAC58  <---------ATHB51 --------->MYB59    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <----- <---------ANAC58--------->YAB1<---------AHL20(2) <---------ANAC58     <---------GLK1(1)--------->ATHB12   tttgcatggctatatataacaataatgtcacaaattatttggtaatgaattttcttgtattaaatgtgtttggagatccaaccgtcgaaatgactggaaa  10330100          --------->YAB1         --------->AHL20(2)         <---------AHL20(2)         <---------YAB1        <---------AHL20(1)        --------->AHL20(2)                     <---------AHL20(2)        --------->AHL20(1)                   <---------YAB1 ---------->GT1                              --------->AHL20(2) ---------YAB1                               <---------AHL20(2) ------>YAB1                         ---------->DOF2 -------ICU4                       <---------YAB1 ----->ICU4    <-----------GT1   --------->CCA1(2)            <------ZmHOX2a(1) ------ATHB12--------->YAB1     --------->ARR11(1)    <---------YAB1                               <- xxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ARR11(3)  --------->YAB1    <---------TOE2(3)            -- --->GLK1(1) --------->AHL20(2) --------->ARR11(3) <---------YAB1    <-----------GT1               <- ----GLK1(1)<---------YAB1  ---------->DOF2 --------->YAB1  <---------TOE2(3)<-----------GT1 <-------   tcatgaaaaatataattatacaatattcaaaaaagatatgaaagaatattaatatgataatttaggaagtttaacattttttctaaatgtatagtttaca  10330200                                                                                            <--------                                                        <------ZmHOX2a(1)            ----------->HVH21                                                        ===================================HOX2a_HOX2a     <-----------GT1                                <---------MYB52(1)              ------>ZmHOX2a(2)    <---------AHL20(2)                            <---------bZIP60(1)             <---------AGP1 --------AHL20(2)                      <---------AHL20(2) --------->At4g35610 <------------CBF     -- ------->AHL20(2)                --------->YAB1   --------->bZIP60(1)    <--------P<---------At4g35610 --------AHL20(1)             --------->YAB1    <---------TGA2(2)      <------MYB46(1)      --------- ----GT1<---------ANAC46     <-------TEIL      ----------->TGA1        <------MYB83--------->At4g35610   ttttattttatcgtatattagaaaacttagattcatcatattttatacgatgacgttaggagcagaaaacagtaggttgctattgatctgacttctaggt  10330300         ---------->DOF2                                                                <---------MYB52(2)     --------->YAB1    --------->ANAC58                                                 --------->ANAC58 -HSFB2a(2)            --------->ANAC58                                                 --------->ANAC58 ------->YAB1         <---------LBD16                 --------->YAB1       <----------DOF2 >HSFB2a(2)           --------->LBD16    <----------DOF2       ------------>CBF      <------ZmHOX2a(1)   ataagaatcaaaaaagaaaacacccgcgcattcaagtatgggcctttaatgggctatagtaatgaaacaatactgggctttacattaggaacgaactatc  10330400                                                                 ---------->DOF2                                                               <-----------HVH21                                    --------->ANAC46         <------------AtMYB77                                  --------->MYB52(1)   --------->DAG2                       --------->ANAC58               ---------->DOF2                       --------->ANAC58           --------->ANAC58                     --------->MYB52(1)         --------->MYB52(1) --------->ANAC58        --------->YAB1                    <------ZmHOX2a(1)     ---------->DOF2  --------->MYB52(1)           <---------GLK1(1)                --------->TOE1(2)----------->HVH21--------->ANAC58 --------->ANAC58     --------->GLK1(1)             --------->ZAT14----------->HVH21  <---------ZAT14------->GAMYB      ---------->DOF2   tctcatgtccgtctgtaaactaggaacggactgactcgacggagcaaagtgaacggaaaagtaactgtcaagcgagcgagtgagaaagagaaatcagaaa  10330500                  --------->ARR14(2)         --------->ARR14(2)         <---------GLK1(2)         <---------ARR14(2)      <---------ANAC55(2)      --------->ANAC55(2)   <---------ICU4      <---------ANAC46 --------->LBD16     <---------LBD16  --------->HSFB2a(2)   --------->ARR14(2) <---------LBD16                       --------->ANAC46   <---------ARR14(2)<---------ANAC46                  --------->ZAT6  <-------GAMYB   <---------ARR14(2)             <------ZmHOX2a(2)           ---------->DOF2 <---------MYB46(3)  <---------LBD16             ==================================HOX2a_HOX2a --------->MYB55(2) <---------LBD16   --------->YAB1------>ZmHOX2a(1)       ------>ZmHOX2a(1)   tggtggttacggattctccagtttcggggataatggctgatcagaacatcgatcctaacaccacgacgagccctagtcctaaagagaagcatgtttctgc  10330600                 <------NtERF2                                                     --------->GLK1(1)                ------>NtERF2                                                   --------->LBD16               --------->DEAR3(1)                                              <---------HSFB2a(2)               <---------DEAR3(1)                                              --------->HSFB2a(2)               ----------->HVH21                                      --------->MYB52(1)              --------->ATERF1(1)                                    --------->MYB55(1)             --------->LBD16                                         ------->GAMYB---------->DOF2             <---------ATERF1(1)                                    <---------MYB46(2)             ------>NtERF2                ---------->DOF2           <---------MYB55(2)            ---            <---------DEAR3(1)<-----------HVH21                     --------->MYB46(3)           ----           <---------LBD16    --------->LBD16          <------NtERF2<---------MYB52(2)           ----  <---------TOE2(3)          <---------ANAC46 --------->ARR11(3)    <---------MYB111(2)--------->ZAT18  <---------TOE1(3)   ---------->DOF2<------ZmHOX2a(1)<-----------HVH21 --------->TOE2(3)        <---   gattaaggctatctccggcgacgagaaagctccgtcgaaggagaaaaagaactacgcgtcgaagaaatcaactaccgtaatccagaaatcgcactgtttc  10330700                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                       --------->AGP1 --------->GLK1(1)                                            --------->ARR11(3) <---------GLK1(1)                                            <---------ARR11(3) ------>LBD16                                                <---------At4g35610 ----->HSFB2a(2)                 ------>ZmHOX2a(1)     <---------LBD16 <---------ARR11(3) ----->HSFC1(1)              ------>ZmHOX2a(1) --------->ANAC58       <---------GLK1(1) ------HSFB2a(2)           <---------ICU4      --------->ANAC58  <----------DOF2   cagaattcttggacattttggttcgataatccttcctccaaatcgaatcaagtcatatggggaagctctttgagatccttgtatacattcggtactatcg  10330800                                <---------ANAC58                                <---------ANAC58                       ------->TEIL                       <-----------GT1                                         <---------ANAC46     <---------HSFB2a(2)   ------>ZmHOX2a(1)                                   ----------->GT1     --------->HSFB2a(2)   <----------DOF2                               --------->GLK1(2)    <---------LBD16 --------->ANAC55(2)                                  <---------ARR14(2) <---------GLK1(1) --------------->AtSPL8                                --------->ARR14(2)         <   aagagttctggaggtgagatttatgtatcctttttcttgttgtatgaaatagtttcttcggtttcactgagaacaaatctggagtgaatatgaaatagtt  10330900                                   <---------ZAT2                                   <---------At4g35610                                   --------->At4g35610                                   --------->GLK1(1)                                   --------->ZAT2            ------>ZmHOX2a(2)                              <---------ZAT2    <---------MYB52(1)                      <---------ARR14(2)  --------->ATHB12 <---------ARR11(3)                      --------->ARR14(2) <---------YAB1<---------ANAC58      <---------ARR14(2)      <---------At4g35610      <---------ANAC46      --------->ARR14(2)      --------->At4g35610      <---------ANAC58                   <---------- ---------TOE2(3)  <---------TOE2(3)     <---------ATHB12  --------->ARR11(3)   ---------->DOF2  ----   ttgaggcagaaccagtagattagggattcgatagctgagctccatgattcgtttgtgccttgatcttagatttatagctatagaaagcgttgtttctatc  10331000  Previous    Next  AGI:  At1g29550.1    Description:  eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative. Identical to Putative eukaryotic translation initiation factor 4E-4 [Arabidopsis Thaliana] (GB:Q9C7P6); similar to eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G29590.1); similar to eukaryotic translation initiation factor 4E [Lactuca sativa] (GB:AAP86602.1); contains InterPro domain Eukaryotic translation initiation factor 4E (eIF-4E); (InterPro:IPR001040) Range:  from: 10330500    to: 10332312    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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